RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 APLP1P51693 650 aa19.58■□□□□ 0.72
CTSD-202ENST00000367196 SOGA3Q5TF21 947 aa19.58■□□□□ 0.72
CTSD-202ENST00000367196 NBPF5PQ86XG9 351 aaPredicted RBP19.58■□□□□ 0.72
CTSD-202ENST00000367196 CNKSR1Q969H4 720 aa19.58■□□□□ 0.72
CTSD-202ENST00000367196 CEP350Q5VT06 3117 aa19.58■□□□□ 0.72
CTSD-202ENST00000367196 STYK1Q6J9G0 422 aa19.57■□□□□ 0.72
CTSD-202ENST00000367196 TPTE2Q6XPS3 522 aa19.56■□□□□ 0.72
CTSD-202ENST00000367196 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
CTSD-202ENST00000367196 NIP7Q9Y221 180 aaKnown RBP eCLIP19.56■□□□□ 0.724e-13■□□□□ 10.1
CTSD-202ENST00000367196 CCDC88AQ3V6T2 1871 aa19.56■□□□□ 0.72
CTSD-202ENST00000367196 FSTL1Q12841 308 aa19.55■□□□□ 0.72
CTSD-202ENST00000367196 FER1L6Q2WGJ9 1857 aa19.55■□□□□ 0.72
CTSD-202ENST00000367196 MIS18AQ9NYP9 233 aa19.55■□□□□ 0.72
CTSD-202ENST00000367196 CACNA1SQ13698 1873 aa19.54■□□□□ 0.72
CTSD-202ENST00000367196 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
CTSD-202ENST00000367196 NFKBIEO00221 500 aa19.54■□□□□ 0.72
CTSD-202ENST00000367196 SRGNP10124 158 aa19.54■□□□□ 0.72
CTSD-202ENST00000367196 LMOD3Q0VAK6 560 aa19.54■□□□□ 0.72
CTSD-202ENST00000367196 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
CTSD-202ENST00000367196 CCDC24Q8N4L8 307 aa19.54■□□□□ 0.72
CTSD-202ENST00000367196 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
CTSD-202ENST00000367196 DICER1Q9UPY3 1922 aaKnown RBP19.53■□□□□ 0.72
CTSD-202ENST00000367196 GLTPD2A6NH11 291 aa19.53■□□□□ 0.72
CTSD-202ENST00000367196 C21orf2O43822 256 aa19.53■□□□□ 0.72
CTSD-202ENST00000367196 EIF4A1P60842 406 aaKnown RBP19.53■□□□□ 0.72
CTSD-202ENST00000367196 RRAGCQ9HB90 399 aa19.53■□□□□ 0.72
CTSD-202ENST00000367196 MYBBP1AQ9BQG0 1328 aaKnown RBP19.52■□□□□ 0.72
CTSD-202ENST00000367196 LTBP3Q9NS15 1303 aa19.52■□□□□ 0.72
CTSD-202ENST00000367196 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.72
CTSD-202ENST00000367196 PRPF40BQ6NWY9 871 aaKnown RBP19.52■□□□□ 0.72
CTSD-202ENST00000367196 KIF6Q6ZMV9 814 aa19.52■□□□□ 0.72
CTSD-202ENST00000367196 TAOK3Q9H2K8 898 aa19.52■□□□□ 0.72
CTSD-202ENST00000367196 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
CTSD-202ENST00000367196 ERVV-1B6SEH8 477 aa19.51■□□□□ 0.71
CTSD-202ENST00000367196 NPR1P16066 1061 aa19.51■□□□□ 0.71
CTSD-202ENST00000367196 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
CTSD-202ENST00000367196 NYXQ9GZU5 481 aa19.51■□□□□ 0.71
CTSD-202ENST00000367196 ZNF219Q9P2Y4 722 aaPredicted RBP19.51■□□□□ 0.71
CTSD-202ENST00000367196 VEGFAP15692 232 aaPredicted RBP19.5■□□□□ 0.71
CTSD-202ENST00000367196 SMC1BQ8NDV3 1235 aa19.5■□□□□ 0.71
CTSD-202ENST00000367196 BABAM1Q9NWV8 329 aa19.5■□□□□ 0.71
CTSD-202ENST00000367196 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
CTSD-202ENST00000367196 SLX4Q8IY92 1834 aa19.5■□□□□ 0.71
CTSD-202ENST00000367196 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
CTSD-202ENST00000367196 NUP98P52948 1817 aa19.49■□□□□ 0.71
CTSD-202ENST00000367196 RIPK4P57078 832 aa19.49■□□□□ 0.71
CTSD-202ENST00000367196 ERFEQ4G0M1 354 aa19.49■□□□□ 0.71
CTSD-202ENST00000367196 THUMPD2Q9BTF0 503 aaKnown RBP19.49■□□□□ 0.71
CTSD-202ENST00000367196 MAP3K15Q6ZN16 1313 aa19.49■□□□□ 0.71
CTSD-202ENST00000367196 KLRG2A4D1S0 409 aaPredicted RBP19.48■□□□□ 0.71
CTSD-202ENST00000367196 PRELPP51888 382 aa19.48■□□□□ 0.71
CTSD-202ENST00000367196 CCDC93Q567U6 631 aa19.48■□□□□ 0.71
CTSD-202ENST00000367196 RRP7AQ9Y3A4 280 aaKnown RBP19.48■□□□□ 0.71
CTSD-202ENST00000367196 IBTKQ9P2D0 1353 aaPredicted RBP19.47■□□□□ 0.71
CTSD-202ENST00000367196 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
CTSD-202ENST00000367196 HLFQ16534 295 aa19.47■□□□□ 0.71
CTSD-202ENST00000367196 NGEFQ8N5V2 710 aa19.47■□□□□ 0.71
CTSD-202ENST00000367196 FAM177BA6PVY3 158 aa19.46■□□□□ 0.71
CTSD-202ENST00000367196 MYL6BP14649 208 aa19.46■□□□□ 0.71
CTSD-202ENST00000367196 ALDH1B1P30837 517 aa19.46■□□□□ 0.71
CTSD-202ENST00000367196 WDR43Q15061 677 aaKnown RBP eCLIP19.46■□□□□ 0.71
CTSD-202ENST00000367196 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
CTSD-202ENST00000367196 RIC1Q4ADV7 1423 aa19.44■□□□□ 0.7
CTSD-202ENST00000367196 RTKN2Q8IZC4 609 aa19.44■□□□□ 0.7
CTSD-202ENST00000367196 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
CTSD-202ENST00000367196 FKBP4Q02790 459 aaKnown RBP eCLIP19.42■□□□□ 0.7
CTSD-202ENST00000367196 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
CTSD-202ENST00000367196 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
CTSD-202ENST00000367196 CRY2Q49AN0 593 aa19.41■□□□□ 0.7
CTSD-202ENST00000367196 PARP10Q53GL7 1025 aa19.41■□□□□ 0.7
CTSD-202ENST00000367196 GIGYF2Q6Y7W6 1299 aaKnown RBP19.41■□□□□ 0.7
CTSD-202ENST00000367196 PPP1R42Q7Z4L9 355 aa19.41■□□□□ 0.7
CTSD-202ENST00000367196 RUNDC1Q96C34 613 aa19.41■□□□□ 0.7
CTSD-202ENST00000367196 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
CTSD-202ENST00000367196 GPTP24298 496 aa19.4■□□□□ 0.7
CTSD-202ENST00000367196 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
CTSD-202ENST00000367196 ABCC12Q96J65 1359 aa19.4■□□□□ 0.7
CTSD-202ENST00000367196 IQCA1LA6NCM1 817 aa19.39■□□□□ 0.69
CTSD-202ENST00000367196 GRIPAP1Q4V328 841 aa19.39■□□□□ 0.69
CTSD-202ENST00000367196 CC2D2BQ6DHV5 1058 aa19.39■□□□□ 0.69
CTSD-202ENST00000367196 NUTM1Q86Y26 1132 aa19.39■□□□□ 0.69
CTSD-202ENST00000367196 DNAJC5GQ8N7S2 189 aa19.39■□□□□ 0.69
CTSD-202ENST00000367196 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
CTSD-202ENST00000367196 HSP90AB3PQ58FF7 597 aa19.38■□□□□ 0.69
CTSD-202ENST00000367196 RNF123Q5XPI4 1314 aa19.38■□□□□ 0.69
CTSD-202ENST00000367196 UBN2Q6ZU65 1347 aa19.38■□□□□ 0.69
CTSD-202ENST00000367196 CCDC146Q8IYE0 955 aa19.38■□□□□ 0.69
CTSD-202ENST00000367196 ZNF34Q8IZ26 560 aa19.38■□□□□ 0.69
CTSD-202ENST00000367196 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
CTSD-202ENST00000367196 SCN4AP35499 1836 aa19.37■□□□□ 0.69
CTSD-202ENST00000367196 RBM17Q96I25 401 aaKnown RBP19.37■□□□□ 0.69
CTSD-202ENST00000367196 ANKRD36CQ5JPF3 1778 aa19.37■□□□□ 0.69
CTSD-202ENST00000367196 NTSR2O95665 410 aa19.36■□□□□ 0.69
CTSD-202ENST00000367196 SUSD4Q5VX71 490 aa19.36■□□□□ 0.69
CTSD-202ENST00000367196 PSMD1Q99460 953 aa19.36■□□□□ 0.69
CTSD-202ENST00000367196 TMX4Q9H1E5 349 aaPredicted RBP19.36■□□□□ 0.69
CTSD-202ENST00000367196 POTECB2RU33 542 aa19.35■□□□□ 0.69
CTSD-202ENST00000367196 DDNO94850 711 aaPredicted RBP19.35■□□□□ 0.69
CTSD-202ENST00000367196 HOXB7P09629 217 aa19.35■□□□□ 0.69
CTSD-202ENST00000367196 HOXA10P31260 410 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms