RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
PRKN-206ENST00000366898 SNW1Q13573 536 aaKnown RBP13.72□□□□□ -0.21
PRKN-206ENST00000366898 ELF2Q15723 593 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 SMARCC1Q92922 1105 aaPredicted RBP13.72□□□□□ -0.21
PRKN-206ENST00000366898 SFPQP23246 707 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRKN-206ENST00000366898 IL13P35225 146 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 MCM2P49736 904 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 NUCB1Q02818 461 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 ARFGAP3Q9NP61 516 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 CEP152O94986 1710 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 CCP110O43303 1012 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 SURF6O75683 361 aaKnown RBP13.72□□□□□ -0.21
PRKN-206ENST00000366898 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 VPS18Q9P253 973 aa13.72□□□□□ -0.21
PRKN-206ENST00000366898 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 NEBLO76041 1014 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 SERPINC1P01008 464 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 ANXA1P04083 346 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 UBTFL1P0CB47 393 aaPredicted RBP13.71□□□□□ -0.21
PRKN-206ENST00000366898 RPAINQ86UA6 219 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 ZMYM3Q14202 1370 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 MLH3Q9UHC1 1453 aa13.71□□□□□ -0.21
PRKN-206ENST00000366898 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.22
PRKN-206ENST00000366898 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.22
PRKN-206ENST00000366898 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.22
PRKN-206ENST00000366898 FAM107BQ9H098 131 aa13.71□□□□□ -0.22
PRKN-206ENST00000366898 C9orf78Q9NZ63 289 aaPredicted RBP13.71□□□□□ -0.22
PRKN-206ENST00000366898 SMC5Q8IY18 1101 aa13.7□□□□□ -0.22
PRKN-206ENST00000366898 THEMISQ8N1K5 641 aaPredicted RBP13.7□□□□□ -0.22
PRKN-206ENST00000366898 ABCC3O15438 1527 aa13.7□□□□□ -0.22
PRKN-206ENST00000366898 SKILP12757 684 aa13.7□□□□□ -0.22
PRKN-206ENST00000366898 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
PRKN-206ENST00000366898 OTUD7AQ8TE49 926 aaPredicted RBP13.7□□□□□ -0.22
PRKN-206ENST00000366898 NEO1Q92859 1461 aa13.7□□□□□ -0.22
PRKN-206ENST00000366898 HNRNPH2P55795 449 aaKnown RBP13.7□□□□□ -0.22
PRKN-206ENST00000366898 KRT85P78386 507 aa13.7□□□□□ -0.22
PRKN-206ENST00000366898 METP08581 1390 aa13.69□□□□□ -0.22
PRKN-206ENST00000366898 TNRQ92752 1358 aa13.69□□□□□ -0.22
PRKN-206ENST00000366898 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
PRKN-206ENST00000366898 GNAI2P04899 355 aa13.69□□□□□ -0.22
PRKN-206ENST00000366898 SART3Q15020 963 aaKnown RBP13.69□□□□□ -0.22
PRKN-206ENST00000366898 CCDC30Q5VVM6 783 aa13.69□□□□□ -0.22
PRKN-206ENST00000366898 DNAI1Q9UI46 699 aa13.69□□□□□ -0.22
PRKN-206ENST00000366898 BRPF1P55201 1214 aaPredicted RBP13.69□□□□□ -0.22
PRKN-206ENST00000366898 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
PRKN-206ENST00000366898 PPRC1Q5VV67 1664 aaKnown RBP13.69□□□□□ -0.22
PRKN-206ENST00000366898 ATP2C2O75185 946 aa13.68□□□□□ -0.22
PRKN-206ENST00000366898 MTHFSDQ2M296 383 aaKnown RBP13.68□□□□□ -0.22
PRKN-206ENST00000366898 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
PRKN-206ENST00000366898 JRKLQ9Y4A0 524 aa13.68□□□□□ -0.22
PRKN-206ENST00000366898 CASQ1P31415 396 aa13.68□□□□□ -0.22
PRKN-206ENST00000366898 G2E3Q7L622 706 aa13.68□□□□□ -0.22
PRKN-206ENST00000366898 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
PRKN-206ENST00000366898 CASTP20810 708 aaKnown RBP13.68□□□□□ -0.22
PRKN-206ENST00000366898 ZNF165P49910 485 aa13.68□□□□□ -0.22
PRKN-206ENST00000366898 LTKP29376 864 aa13.67□□□□□ -0.22
PRKN-206ENST00000366898 NUTM1Q86Y26 1132 aa13.67□□□□□ -0.22
PRKN-206ENST00000366898 RABEP2Q9H5N1 569 aa13.67□□□□□ -0.22
PRKN-206ENST00000366898 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
PRKN-206ENST00000366898 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
PRKN-206ENST00000366898 NLRP2Q9NX02 1062 aa13.67□□□□□ -0.22
PRKN-206ENST00000366898 ERC2O15083 957 aa13.67□□□□□ -0.22
PRKN-206ENST00000366898 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
PRKN-206ENST00000366898 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
PRKN-206ENST00000366898 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
PRKN-206ENST00000366898 ZNF530Q6P9A1 599 aaPredicted RBP13.66□□□□□ -0.22
PRKN-206ENST00000366898 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
PRKN-206ENST00000366898 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
PRKN-206ENST00000366898 ZNF445P59923 1031 aa13.66□□□□□ -0.22
PRKN-206ENST00000366898 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
PRKN-206ENST00000366898 ARAP3Q8WWN8 1544 aa13.66□□□□□ -0.22
PRKN-206ENST00000366898 LIG1P18858 919 aa13.66□□□□□ -0.22
PRKN-206ENST00000366898 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
PRKN-206ENST00000366898 MPRIPQ6WCQ1 1025 aa13.65□□□□□ -0.22
PRKN-206ENST00000366898 PPM1EQ8WY54 764 aa13.65□□□□□ -0.22
PRKN-206ENST00000366898 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
PRKN-206ENST00000366898 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
PRKN-206ENST00000366898 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
PRKN-206ENST00000366898 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
PRKN-206ENST00000366898 GNAI3P08754 354 aa13.65□□□□□ -0.22
PRKN-206ENST00000366898 NAP1L1P55209 391 aaKnown RBP13.65□□□□□ -0.22
PRKN-206ENST00000366898 ICE2Q659A1 982 aa13.65□□□□□ -0.22
PRKN-206ENST00000366898 ARID4AP29374 1257 aaPredicted RBP13.64□□□□□ -0.23
PRKN-206ENST00000366898 KIF4BQ2VIQ3 1234 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 EYA1Q99502 592 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 KDM4AO75164 1064 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 CCT4P50991 539 aaKnown RBP13.64□□□□□ -0.23
PRKN-206ENST00000366898 CEP57L1Q8IYX8 460 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 PAIP2Q9BPZ3 127 aaKnown RBP13.64□□□□□ -0.23
PRKN-206ENST00000366898 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
PRKN-206ENST00000366898 EBAG9O00559 213 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRKN-206ENST00000366898 FLIIQ13045 1269 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 TERF2Q15554 542 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 SYT10Q6XYQ8 523 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 USP48Q86UV5 1035 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 LAMC1P11047 1609 aa13.64□□□□□ -0.23
PRKN-206ENST00000366898 SRGAP3O43295 1099 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms