RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
PRKN-204ENST00000366896 SHANK3Q9BYB0 1731 aa17.88■□□□□ 0.45
PRKN-204ENST00000366896 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
PRKN-204ENST00000366896 R3HCC1Q9Y3T6 440 aaKnown RBP17.88■□□□□ 0.45
PRKN-204ENST00000366896 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
PRKN-204ENST00000366896 GNAI3P08754 354 aa17.88■□□□□ 0.45
PRKN-204ENST00000366896 MCM2P49736 904 aa17.88■□□□□ 0.45
PRKN-204ENST00000366896 NECTIN2Q92692 538 aa17.88■□□□□ 0.45
PRKN-204ENST00000366896 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
PRKN-204ENST00000366896 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
PRKN-204ENST00000366896 NCLP19338 710 aaKnown RBP17.87■□□□□ 0.45
PRKN-204ENST00000366896 RBM10P98175 930 aaKnown RBP17.87■□□□□ 0.45
PRKN-204ENST00000366896 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
PRKN-204ENST00000366896 ZCRB1Q8TBF4 217 aaKnown RBP17.87■□□□□ 0.45
PRKN-204ENST00000366896 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
PRKN-204ENST00000366896 PRIM1P49642 420 aaKnown RBP17.86■□□□□ 0.45
PRKN-204ENST00000366896 PNMA6EA0A0J9YXQ4 647 aa17.86■□□□□ 0.45
PRKN-204ENST00000366896 FLIIQ13045 1269 aa17.86■□□□□ 0.45
PRKN-204ENST00000366896 CCDC30Q5VVM6 783 aa17.86■□□□□ 0.45
PRKN-204ENST00000366896 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
PRKN-204ENST00000366896 N4BP2Q86UW6 1770 aaPredicted RBP17.85■□□□□ 0.45
PRKN-204ENST00000366896 CYP27B1O15528 508 aa17.85■□□□□ 0.45
PRKN-204ENST00000366896 PHKG2P15735 406 aa17.85■□□□□ 0.45
PRKN-204ENST00000366896 ANAPC15P60006 121 aa17.85■□□□□ 0.45
PRKN-204ENST00000366896 ZKSCAN5Q9Y2L8 839 aa17.85■□□□□ 0.45
PRKN-204ENST00000366896 ZDHHC9Q9Y397 364 aa17.85■□□□□ 0.45
PRKN-204ENST00000366896 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
PRKN-204ENST00000366896 FKBP5Q13451 457 aaPredicted RBP17.84■□□□□ 0.45
PRKN-204ENST00000366896 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 CHAMP1Q96JM3 812 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 STAP2Q9UGK3 403 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 AOX1Q06278 1338 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 CACNA1FO60840 1977 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 MCM5P33992 734 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 ATP8B2P98198 1209 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 IFNL2Q8IZJ0 200 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 CDCA7Q9BWT1 371 aaPredicted RBP17.84■□□□□ 0.45
PRKN-204ENST00000366896 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
PRKN-204ENST00000366896 GPT2Q8TD30 523 aa17.83■□□□□ 0.45
PRKN-204ENST00000366896 LRRCC1Q9C099 1032 aa17.83■□□□□ 0.45
PRKN-204ENST00000366896 CEMIPQ8WUJ3 1361 aa17.83■□□□□ 0.45
PRKN-204ENST00000366896 ATRNO75882 1429 aa17.83■□□□□ 0.45
PRKN-204ENST00000366896 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.44
PRKN-204ENST00000366896 LGR6Q9HBX8 967 aa17.83■□□□□ 0.44
PRKN-204ENST00000366896 CSPP1Q1MSJ5 1256 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 SCN11AQ9UI33 1791 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 UQCRHLA0A096LP55 91 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 UQCRHP07919 91 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 MX1P20591 662 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 ESYT1Q9BSJ8 1104 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 GLI3P10071 1580 aa17.82■□□□□ 0.44
PRKN-204ENST00000366896 RNMTO43148 476 aaKnown RBP17.81■□□□□ 0.44
PRKN-204ENST00000366896 PRPF40AO75400 957 aaKnown RBP17.81■□□□□ 0.44
PRKN-204ENST00000366896 LRSAM1Q6UWE0 723 aa17.81■□□□□ 0.44
PRKN-204ENST00000366896 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
PRKN-204ENST00000366896 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
PRKN-204ENST00000366896 CUL4AQ13619 759 aa17.81■□□□□ 0.44
PRKN-204ENST00000366896 RBM27Q9P2N5 1060 aaKnown RBP17.81■□□□□ 0.44
PRKN-204ENST00000366896 PALD1Q9ULE6 856 aa17.81■□□□□ 0.44
PRKN-204ENST00000366896 MCCP23508 829 aa17.8■□□□□ 0.44
PRKN-204ENST00000366896 NEK4P51957 841 aa17.8■□□□□ 0.44
PRKN-204ENST00000366896 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
PRKN-204ENST00000366896 TRPC5Q9UL62 973 aaPredicted RBP17.8■□□□□ 0.44
PRKN-204ENST00000366896 LRRFIP2Q9Y608 721 aaKnown RBP17.8■□□□□ 0.44
PRKN-204ENST00000366896 DYNC1I1O14576 645 aa17.79■□□□□ 0.44
PRKN-204ENST00000366896 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
PRKN-204ENST00000366896 FOXD4L5Q5VV16 416 aaPredicted RBP17.79■□□□□ 0.44
PRKN-204ENST00000366896 DDX54Q8TDD1 881 aaKnown RBP17.79■□□□□ 0.44
PRKN-204ENST00000366896 FOXD4L4Q8WXT5 416 aaPredicted RBP17.79■□□□□ 0.44
PRKN-204ENST00000366896 GJD4Q96KN9 370 aaPredicted RBP17.79■□□□□ 0.44
PRKN-204ENST00000366896 EXOC5O00471 708 aa17.79■□□□□ 0.44
PRKN-204ENST00000366896 MTERF4Q7Z6M4 381 aaKnown RBP17.79■□□□□ 0.44
PRKN-204ENST00000366896 RILPL2Q969X0 211 aa17.79■□□□□ 0.44
PRKN-204ENST00000366896 TMX3Q96JJ7 454 aa17.79■□□□□ 0.44
PRKN-204ENST00000366896 TMEM63CQ9P1W3 806 aa17.79■□□□□ 0.44
PRKN-204ENST00000366896 CCDC39Q9UFE4 941 aa17.79■□□□□ 0.44
PRKN-204ENST00000366896 PRDM4Q9UKN5 801 aa17.79■□□□□ 0.44
PRKN-204ENST00000366896 NKX1-1Q15270 411 aaPredicted RBP17.78■□□□□ 0.44
PRKN-204ENST00000366896 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
PRKN-204ENST00000366896 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
PRKN-204ENST00000366896 SIPA1L3O60292 1781 aaPredicted RBP17.78■□□□□ 0.44
PRKN-204ENST00000366896 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
PRKN-204ENST00000366896 CHMLP26374 656 aa17.78■□□□□ 0.44
PRKN-204ENST00000366896 DDB1Q16531 1140 aa17.77■□□□□ 0.44
PRKN-204ENST00000366896 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
PRKN-204ENST00000366896 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
PRKN-204ENST00000366896 USP44Q9H0E7 712 aa17.77■□□□□ 0.44
PRKN-204ENST00000366896 QTRT2Q9H974 415 aaKnown RBP17.77■□□□□ 0.44
PRKN-204ENST00000366896 ANO2Q9NQ90 1003 aa17.77■□□□□ 0.44
PRKN-204ENST00000366896 CHMP4AQ9BY43 222 aa17.76■□□□□ 0.43
PRKN-204ENST00000366896 MRC1P22897 1456 aa17.76■□□□□ 0.43
PRKN-204ENST00000366896 SYCE3A1L190 88 aa17.76■□□□□ 0.43
PRKN-204ENST00000366896 RAB11FIP3O75154 756 aa17.76■□□□□ 0.43
PRKN-204ENST00000366896 SASS6Q6UVJ0 657 aa17.76■□□□□ 0.43
PRKN-204ENST00000366896 SSH3Q8TE77 659 aa17.76■□□□□ 0.43
PRKN-204ENST00000366896 IL25Q9H293 177 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms