RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 TGFB2P61812 414 aa25.82■■□□□ 1.72
H3F3A-204ENST00000366816 CLEC4GQ6UXB4 293 aa25.82■■□□□ 1.72
H3F3A-204ENST00000366816 ZBTB3Q9H5J0 574 aa25.82■■□□□ 1.72
H3F3A-204ENST00000366816 CHPF2Q9P2E5 772 aa25.82■■□□□ 1.72
H3F3A-204ENST00000366816 BCORQ6W2J9 1755 aa25.82■■□□□ 1.72
H3F3A-204ENST00000366816 PXDNLA1KZ92 1463 aa25.81■■□□□ 1.72
H3F3A-204ENST00000366816 KIF6Q6ZMV9 814 aa25.81■■□□□ 1.72
H3F3A-204ENST00000366816 ZNF652Q9Y2D9 606 aa25.81■■□□□ 1.72
H3F3A-204ENST00000366816 KIF13BQ9NQT8 1826 aa25.81■■□□□ 1.72
H3F3A-204ENST00000366816 AFDNP55196 1824 aaKnown RBP25.8■■□□□ 1.72
H3F3A-204ENST00000366816 HOXB7P09629 217 aa25.8■■□□□ 1.72
H3F3A-204ENST00000366816 AIMP1Q12904 312 aaKnown RBP25.8■■□□□ 1.72
H3F3A-204ENST00000366816 MAP3K15Q6ZN16 1313 aa25.8■■□□□ 1.72
H3F3A-204ENST00000366816 WDR63Q8IWG1 891 aa25.79■■□□□ 1.72
H3F3A-204ENST00000366816 TSPYL6Q8N831 410 aa25.79■■□□□ 1.72
H3F3A-204ENST00000366816 DDX21Q9NR30 783 aaKnown RBP eCLIP25.79■■□□□ 1.72
H3F3A-204ENST00000366816 NIP7Q9Y221 180 aaKnown RBP eCLIP25.79■■□□□ 1.72
H3F3A-204ENST00000366816 IL16Q14005 1332 aa25.79■■□□□ 1.72
H3F3A-204ENST00000366816 GOLGB1Q14789 3259 aaKnown RBP25.79■■□□□ 1.72
H3F3A-204ENST00000366816 CARMIL3Q8ND23 1372 aa25.79■■□□□ 1.72
H3F3A-204ENST00000366816 N4BP2Q86UW6 1770 aaPredicted RBP25.79■■□□□ 1.72
H3F3A-204ENST00000366816 UTRNP46939 3433 aa25.78■■□□□ 1.72
H3F3A-204ENST00000366816 ERVV-1B6SEH8 477 aa25.78■■□□□ 1.72
H3F3A-204ENST00000366816 CHRNA5P30532 468 aa25.78■■□□□ 1.72
H3F3A-204ENST00000366816 COPS6Q7L5N1 327 aa25.78■■□□□ 1.72
H3F3A-204ENST00000366816 XAGE3Q8WTP9 111 aa25.78■■□□□ 1.72
H3F3A-204ENST00000366816 FAM177BA6PVY3 158 aa25.77■■□□□ 1.72
H3F3A-204ENST00000366816 PRR5LQ6MZQ0 368 aa25.77■■□□□ 1.72
H3F3A-204ENST00000366816 SPINK5Q9NQ38 1064 aaPredicted RBP25.77■■□□□ 1.72
H3F3A-204ENST00000366816 KIAA1551Q9HCM1 1747 aa25.77■■□□□ 1.72
H3F3A-204ENST00000366816 NRXN2Q9P2S2 1712 aa25.77■■□□□ 1.72
H3F3A-204ENST00000366816 KCNA3P22001 575 aa25.76■■□□□ 1.71
H3F3A-204ENST00000366816 DBF4Q9UBU7 674 aaPredicted RBP25.75■■□□□ 1.71
H3F3A-204ENST00000366816 RGL2O15211 777 aa25.74■■□□□ 1.71
H3F3A-204ENST00000366816 NPHP1O15259 732 aa25.74■■□□□ 1.71
H3F3A-204ENST00000366816 GPTP24298 496 aa25.74■■□□□ 1.71
H3F3A-204ENST00000366816 NBPF5PQ86XG9 351 aaPredicted RBP25.74■■□□□ 1.71
H3F3A-204ENST00000366816 CNBD1Q8NA66 436 aa25.74■■□□□ 1.71
H3F3A-204ENST00000366816 FANCIQ9NVI1 1328 aa25.73■■□□□ 1.71
H3F3A-204ENST00000366816 YY1P25490 414 aa25.72■■□□□ 1.71
H3F3A-204ENST00000366816 GIGYF2Q6Y7W6 1299 aaKnown RBP25.72■■□□□ 1.71
H3F3A-204ENST00000366816 BCS1LQ9Y276 419 aa25.72■■□□□ 1.71
H3F3A-204ENST00000366816 TCERG1O14776 1098 aaKnown RBP25.71■■□□□ 1.71
H3F3A-204ENST00000366816 NUP98P52948 1817 aa25.7■■□□□ 1.71
H3F3A-204ENST00000366816 GRIN3BO60391 1043 aa25.7■■□□□ 1.7
H3F3A-204ENST00000366816 TWISTNBQ3B726 338 aaPredicted RBP25.7■■□□□ 1.7
H3F3A-204ENST00000366816 C2CD5Q86YS7 1000 aa25.7■■□□□ 1.7
H3F3A-204ENST00000366816 BRIP1Q9BX63 1249 aa25.7■■□□□ 1.7
H3F3A-204ENST00000366816 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
H3F3A-204ENST00000366816 HYPKQ9NX55 129 aa25.7■■□□□ 1.7
H3F3A-204ENST00000366816 PIM2Q9P1W9 311 aa25.7■■□□□ 1.7
H3F3A-204ENST00000366816 UBN2Q6ZU65 1347 aa25.69■■□□□ 1.7
H3F3A-204ENST00000366816 ST5P78524 1137 aa25.69■■□□□ 1.7
H3F3A-204ENST00000366816 TPTE2Q6XPS3 522 aa25.69■■□□□ 1.7
H3F3A-204ENST00000366816 ZNF34Q8IZ26 560 aa25.69■■□□□ 1.7
H3F3A-204ENST00000366816 ZNF521Q96K83 1311 aa25.68■■□□□ 1.7
H3F3A-204ENST00000366816 EXOSC9Q06265 439 aaKnown RBP25.68■■□□□ 1.7
H3F3A-204ENST00000366816 ATP10DQ9P241 1426 aa25.68■■□□□ 1.7
H3F3A-204ENST00000366816 H0YIN7 160 aa25.67■■□□□ 1.7
H3F3A-204ENST00000366816 GOLGA2Q08379 1002 aa25.67■■□□□ 1.7
H3F3A-204ENST00000366816 CCDC30Q5VVM6 783 aa25.67■■□□□ 1.7
H3F3A-204ENST00000366816 SUSD4Q5VX71 490 aa25.67■■□□□ 1.7
H3F3A-204ENST00000366816 NUTM1Q86Y26 1132 aa25.67■■□□□ 1.7
H3F3A-204ENST00000366816 GTF2E1P29083 439 aaPredicted RBP25.66■■□□□ 1.7
H3F3A-204ENST00000366816 PDE6BP35913 854 aa25.66■■□□□ 1.7
H3F3A-204ENST00000366816 DALRD3Q5D0E6 543 aaKnown RBP25.66■■□□□ 1.7
H3F3A-204ENST00000366816 ANKRD13DQ6ZTN6 518 aa25.66■■□□□ 1.7
H3F3A-204ENST00000366816 ZNF428Q96B54 188 aa25.66■■□□□ 1.7
H3F3A-204ENST00000366816 ANKRD31Q8N7Z5 1873 aa25.66■■□□□ 1.7
H3F3A-204ENST00000366816 MYH16Q9H6N6 1097 aa25.65■■□□□ 1.7
H3F3A-204ENST00000366816 ERFEQ4G0M1 354 aa25.64■■□□□ 1.7
H3F3A-204ENST00000366816 PLBD2Q8NHP8 589 aa25.64■■□□□ 1.7
H3F3A-204ENST00000366816 TCIRG1Q13488 830 aa25.63■■□□□ 1.69
H3F3A-204ENST00000366816 ZNF622Q969S3 477 aaKnown RBP eCLIP25.63■■□□□ 1.69
H3F3A-204ENST00000366816 BRCA1P38398 1863 aaKnown RBP25.62■■□□□ 1.69
H3F3A-204ENST00000366816 VAMP4O75379 141 aa25.62■■□□□ 1.69
H3F3A-204ENST00000366816 NYXQ9GZU5 481 aa25.62■■□□□ 1.69
H3F3A-204ENST00000366816 STK31Q9BXU1 1019 aa25.61■■□□□ 1.69
H3F3A-204ENST00000366816 CHMP4AQ9BY43 222 aa25.61■■□□□ 1.69
H3F3A-204ENST00000366816 ABCC12Q96J65 1359 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 ATP5J2-PTCD1G3V325 749 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 NTSR2O95665 410 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 PARP10Q53GL7 1025 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 HSP90AB3PQ58FF7 597 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 ARHGAP27Q6ZUM4 889 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 RIC3Q7Z5B4 369 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 NLRP10Q86W26 655 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 TTLL6Q8N841 843 aa25.6■■□□□ 1.69
H3F3A-204ENST00000366816 SLC4A2P04920 1241 aa25.59■■□□□ 1.69
H3F3A-204ENST00000366816 SRGNP10124 158 aa25.59■■□□□ 1.69
H3F3A-204ENST00000366816 G2E3Q7L622 706 aa25.59■■□□□ 1.69
H3F3A-204ENST00000366816 PPP1R42Q7Z4L9 355 aa25.59■■□□□ 1.69
H3F3A-204ENST00000366816 CDCA7LQ96GN5 454 aa25.59■■□□□ 1.69
H3F3A-204ENST00000366816 COL11A2P13942 1736 aaPredicted RBP25.58■■□□□ 1.69
H3F3A-204ENST00000366816 UTP14AQ9BVJ6 771 aaKnown RBP25.58■■□□□ 1.69
H3F3A-204ENST00000366816 SYNE4Q8N205 404 aa25.57■■□□□ 1.68
H3F3A-204ENST00000366816 ZNF219Q9P2Y4 722 aaPredicted RBP25.57■■□□□ 1.68
H3F3A-204ENST00000366816 PDZRN3Q9UPQ7 1066 aa25.57■■□□□ 1.68
H3F3A-204ENST00000366816 KLRG2A4D1S0 409 aaPredicted RBP25.56■■□□□ 1.68
H3F3A-204ENST00000366816 CHD4Q14839 1912 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms