RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 CHD4Q14839 1912 aa15.06■□□□□ 0
H3F3A-203ENST00000366815 ATP6V1AP38606 617 aa15.06■□□□□ 0
H3F3A-203ENST00000366815 MSL1Q68DK7 614 aa15.06■□□□□ 0
H3F3A-203ENST00000366815 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
H3F3A-203ENST00000366815 CICQ96RK0 1608 aaPredicted RBP15.06■□□□□ 0
H3F3A-203ENST00000366815 PDE4AP27815 886 aa15.05■□□□□ -0
H3F3A-203ENST00000366815 C1orf141Q5JVX7 400 aa15.05■□□□□ -0
H3F3A-203ENST00000366815 SMIM5Q71RC9 77 aa15.05■□□□□ -0
H3F3A-203ENST00000366815 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
H3F3A-203ENST00000366815 ADAMTS7Q9UKP4 1686 aa15.05■□□□□ -0
H3F3A-203ENST00000366815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.04■□□□□ -0
H3F3A-203ENST00000366815 DIAPH1O60610 1272 aaKnown RBP15.04■□□□□ -0
H3F3A-203ENST00000366815 SSFA2P28290 1259 aa15.04■□□□□ -0
H3F3A-203ENST00000366815 CABP4P57796 275 aa15.04■□□□□ -0
H3F3A-203ENST00000366815 TJP1Q07157 1748 aa15.03■□□□□ -0
H3F3A-203ENST00000366815 PHF14O94880 888 aa15.03■□□□□ -0
H3F3A-203ENST00000366815 HMOX1P09601 288 aa15.03■□□□□ -0
H3F3A-203ENST00000366815 NLGN2Q8NFZ4 835 aa15.03■□□□□ -0
H3F3A-203ENST00000366815 MYH14Q7Z406 1995 aaKnown RBP15.03■□□□□ -0
H3F3A-203ENST00000366815 UTRNP46939 3433 aa15.02■□□□□ -0
H3F3A-203ENST00000366815 MRC1P22897 1456 aa15.02■□□□□ -0
H3F3A-203ENST00000366815 GNPATO15228 680 aa15.02■□□□□ -0
H3F3A-203ENST00000366815 LSM11P83369 360 aaKnown RBP eCLIP15.02■□□□□ -0
H3F3A-203ENST00000366815 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
H3F3A-203ENST00000366815 C4AP0C0L4 1744 aa15.01□□□□□ -0.01
H3F3A-203ENST00000366815 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
H3F3A-203ENST00000366815 GPHNQ9NQX3 736 aaPredicted RBP15.01□□□□□ -0.01
H3F3A-203ENST00000366815 CNTNAP4Q9C0A0 1308 aa15□□□□□ -0.01
H3F3A-203ENST00000366815 PBX2P40425 430 aa15□□□□□ -0.01
H3F3A-203ENST00000366815 PLPP6Q8IY26 295 aa15□□□□□ -0.01
H3F3A-203ENST00000366815 FOXK1P85037 733 aa14.99□□□□□ -0.01
H3F3A-203ENST00000366815 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
H3F3A-203ENST00000366815 MTHFSDQ2M296 383 aaKnown RBP14.99□□□□□ -0.01
H3F3A-203ENST00000366815 RC3H1Q5TC82 1133 aaKnown RBP14.99□□□□□ -0.01
H3F3A-203ENST00000366815 LGR6Q9HBX8 967 aa14.99□□□□□ -0.01
H3F3A-203ENST00000366815 GPR162Q16538 588 aa14.98□□□□□ -0.01
H3F3A-203ENST00000366815 LARP6Q9BRS8 491 aaKnown RBP14.98□□□□□ -0.01
H3F3A-203ENST00000366815 SLC52A2Q9HAB3 445 aa14.98□□□□□ -0.01
H3F3A-203ENST00000366815 WDR70Q9NW82 654 aa14.98□□□□□ -0.01
H3F3A-203ENST00000366815 CD2APQ9Y5K6 639 aa14.98□□□□□ -0.01
H3F3A-203ENST00000366815 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
H3F3A-203ENST00000366815 PTCD1O75127 700 aaKnown RBP14.97□□□□□ -0.01
H3F3A-203ENST00000366815 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
H3F3A-203ENST00000366815 RTCBQ9Y3I0 505 aaKnown RBP14.97□□□□□ -0.01
H3F3A-203ENST00000366815 UBR2Q8IWV8 1755 aa14.97□□□□□ -0.01
H3F3A-203ENST00000366815 GOLGB1Q14789 3259 aaKnown RBP14.97□□□□□ -0.01
H3F3A-203ENST00000366815 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
H3F3A-203ENST00000366815 KIF13BQ9NQT8 1826 aa14.96□□□□□ -0.01
H3F3A-203ENST00000366815 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
H3F3A-203ENST00000366815 RPS6KA4O75676 772 aa14.96□□□□□ -0.01
H3F3A-203ENST00000366815 YBX3P16989 372 aaKnown RBP eCLIP14.96□□□□□ -0.019e-12■■■□□ 16.6
H3F3A-203ENST00000366815 MFSD10Q14728 455 aa14.96□□□□□ -0.01
H3F3A-203ENST00000366815 PTCD2Q8WV60 388 aaKnown RBP14.96□□□□□ -0.01
H3F3A-203ENST00000366815 KIAA1551Q9HCM1 1747 aa14.95□□□□□ -0.02
H3F3A-203ENST00000366815 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
H3F3A-203ENST00000366815 TRAPPC3LQ5T215 181 aa14.95□□□□□ -0.02
H3F3A-203ENST00000366815 ARHGEF1Q92888 912 aaKnown RBP14.95□□□□□ -0.02
H3F3A-203ENST00000366815 CRKLP46109 303 aaKnown RBP14.94□□□□□ -0.02
H3F3A-203ENST00000366815 DSG2Q14126 1118 aa14.94□□□□□ -0.02
H3F3A-203ENST00000366815 PPP2R1AP30153 589 aa14.93□□□□□ -0.02
H3F3A-203ENST00000366815 ZNF784Q8NCA9 323 aaPredicted RBP14.93□□□□□ -0.02
H3F3A-203ENST00000366815 MMP10P09238 476 aa14.92□□□□□ -0.02
H3F3A-203ENST00000366815 GYS1P13807 737 aa14.92□□□□□ -0.02
H3F3A-203ENST00000366815 SLC39A6Q13433 755 aa14.92□□□□□ -0.02
H3F3A-203ENST00000366815 PPP1R15BQ5SWA1 713 aa14.92□□□□□ -0.02
H3F3A-203ENST00000366815 POTEEQ6S8J3 1075 aa14.92□□□□□ -0.02
H3F3A-203ENST00000366815 CFAP53Q96M91 514 aa14.92□□□□□ -0.02
H3F3A-203ENST00000366815 TBC1D12O60347 775 aa14.91□□□□□ -0.02
H3F3A-203ENST00000366815 RFC4P35249 363 aa14.91□□□□□ -0.02
H3F3A-203ENST00000366815 INTS5Q6P9B9 1019 aaKnown RBP14.91□□□□□ -0.02
H3F3A-203ENST00000366815 DNAJC10Q8IXB1 793 aa14.91□□□□□ -0.02
H3F3A-203ENST00000366815 NLGN1Q8N2Q7 840 aa14.91□□□□□ -0.02
H3F3A-203ENST00000366815 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
H3F3A-203ENST00000366815 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
H3F3A-203ENST00000366815 GRIN3BO60391 1043 aa14.9□□□□□ -0.02
H3F3A-203ENST00000366815 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
H3F3A-203ENST00000366815 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
H3F3A-203ENST00000366815 C10orf71Q711Q0 1435 aa14.9□□□□□ -0.02
H3F3A-203ENST00000366815 GNAT3A8MTJ3 354 aa14.89□□□□□ -0.03
H3F3A-203ENST00000366815 CYP19A1P11511 503 aaPredicted RBP14.89□□□□□ -0.03
H3F3A-203ENST00000366815 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
H3F3A-203ENST00000366815 PHACTR3Q96KR7 559 aa14.89□□□□□ -0.03
H3F3A-203ENST00000366815 CCDC87Q9NVE4 849 aa14.89□□□□□ -0.03
H3F3A-203ENST00000366815 USP42Q9H9J4 1324 aaKnown RBP14.89□□□□□ -0.03
H3F3A-203ENST00000366815 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
H3F3A-203ENST00000366815 CEMIPQ8WUJ3 1361 aa14.88□□□□□ -0.03
H3F3A-203ENST00000366815 SRP68Q9UHB9 627 aaKnown RBP14.88□□□□□ -0.03
H3F3A-203ENST00000366815 BRCA1P38398 1863 aaKnown RBP14.88□□□□□ -0.03
H3F3A-203ENST00000366815 SOS1Q07889 1333 aaPredicted RBP14.88□□□□□ -0.03
H3F3A-203ENST00000366815 ARHGAP33O14559 1287 aa14.87□□□□□ -0.03
H3F3A-203ENST00000366815 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
H3F3A-203ENST00000366815 TEFQ10587 303 aa14.86□□□□□ -0.03
H3F3A-203ENST00000366815 FCHSD2O94868 740 aa14.85□□□□□ -0.03
H3F3A-203ENST00000366815 U2AF1L5P0DN76 240 aaPredicted RBP14.85□□□□□ -0.03
H3F3A-203ENST00000366815 U2AF1Q01081 240 aaKnown RBP eCLIP14.85□□□□□ -0.036e-15■■■■□ 20.7
H3F3A-203ENST00000366815 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
H3F3A-203ENST00000366815 ZNF496Q96IT1 587 aaPredicted RBP14.85□□□□□ -0.03
H3F3A-203ENST00000366815 ZBTB1Q9Y2K1 713 aa14.85□□□□□ -0.03
H3F3A-203ENST00000366815 PARP3Q9Y6F1 533 aa14.85□□□□□ -0.03
H3F3A-203ENST00000366815 COL15A1P39059 1388 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms