RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
CSNK1E-202ENST00000366216 DDNO94850 711 aaPredicted RBP14.83□□□□□ -0.04
CSNK1E-202ENST00000366216 SERPINB2P05120 415 aa14.83□□□□□ -0.04
CSNK1E-202ENST00000366216 RGS19P49795 217 aa14.83□□□□□ -0.04
CSNK1E-202ENST00000366216 MTHFSP49914 203 aa14.83□□□□□ -0.04
CSNK1E-202ENST00000366216 LDHDQ86WU2 507 aa14.83□□□□□ -0.04
CSNK1E-202ENST00000366216 NARFQ9UHQ1 456 aa14.83□□□□□ -0.04
CSNK1E-202ENST00000366216 COL15A1P39059 1388 aa14.83□□□□□ -0.04
CSNK1E-202ENST00000366216 IQCA1LA6NCM1 817 aa14.82□□□□□ -0.04
CSNK1E-202ENST00000366216 CYP19A1P11511 503 aaPredicted RBP14.82□□□□□ -0.04
CSNK1E-202ENST00000366216 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
CSNK1E-202ENST00000366216 LTBP3Q9NS15 1303 aa14.82□□□□□ -0.04
CSNK1E-202ENST00000366216 CCDC85CA6NKD9 419 aa14.81□□□□□ -0.04
CSNK1E-202ENST00000366216 C21orf2O43822 256 aa14.81□□□□□ -0.04
CSNK1E-202ENST00000366216 SLC39A6Q13433 755 aa14.81□□□□□ -0.04
CSNK1E-202ENST00000366216 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
CSNK1E-202ENST00000366216 C1orf141Q5JVX7 400 aa14.81□□□□□ -0.04
CSNK1E-202ENST00000366216 LGR6Q9HBX8 967 aa14.81□□□□□ -0.04
CSNK1E-202ENST00000366216 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-202ENST00000366216 ITGBL1O95965 494 aaPredicted RBP14.8□□□□□ -0.04
CSNK1E-202ENST00000366216 MAP2K1Q02750 393 aaPredicted RBP14.8□□□□□ -0.04
CSNK1E-202ENST00000366216 AMOTQ4VCS5 1084 aa14.8□□□□□ -0.04
CSNK1E-202ENST00000366216 CCDC24Q8N4L8 307 aa14.8□□□□□ -0.04
CSNK1E-202ENST00000366216 ZNF622Q969S3 477 aaKnown RBP eCLIP14.8□□□□□ -0.046e-8■■□□□ 11.7
CSNK1E-202ENST00000366216 TAOK3Q9H2K8 898 aa14.8□□□□□ -0.04
CSNK1E-202ENST00000366216 BCORQ6W2J9 1755 aa14.8□□□□□ -0.04
CSNK1E-202ENST00000366216 RASSF10A6NK89 507 aa14.79□□□□□ -0.04
CSNK1E-202ENST00000366216 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
CSNK1E-202ENST00000366216 CFAP53Q96M91 514 aa14.79□□□□□ -0.04
CSNK1E-202ENST00000366216 TAF1DQ9H5J8 278 aaPredicted RBP14.79□□□□□ -0.04
CSNK1E-202ENST00000366216 ADAMTS8Q9UP79 889 aa14.79□□□□□ -0.04
CSNK1E-202ENST00000366216 LTBP1Q14766 1721 aa14.78□□□□□ -0.04
CSNK1E-202ENST00000366216 WDR33Q9C0J8 1336 aaKnown RBP14.78□□□□□ -0.04
CSNK1E-202ENST00000366216 DEFB115Q30KQ5 88 aa14.78□□□□□ -0.04
CSNK1E-202ENST00000366216 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
CSNK1E-202ENST00000366216 PDE6BP35913 854 aa14.77□□□□□ -0.05
CSNK1E-202ENST00000366216 MRC1P22897 1456 aa14.76□□□□□ -0.05
CSNK1E-202ENST00000366216 EAPPQ56P03 285 aaPredicted RBP14.76□□□□□ -0.05
CSNK1E-202ENST00000366216 BICDL1Q6ZP65 573 aa14.76□□□□□ -0.05
CSNK1E-202ENST00000366216 BRIP1Q9BX63 1249 aa14.76□□□□□ -0.05
CSNK1E-202ENST00000366216 GTF3C3Q9Y5Q9 886 aa14.76□□□□□ -0.05
CSNK1E-202ENST00000366216 TBC1D9BQ66K14 1250 aa14.75□□□□□ -0.05
CSNK1E-202ENST00000366216 SULT6B1Q6IMI4 303 aa14.75□□□□□ -0.05
CSNK1E-202ENST00000366216 SLC52A2Q9HAB3 445 aa14.75□□□□□ -0.05
CSNK1E-202ENST00000366216 CLEC11AQ9Y240 323 aa14.75□□□□□ -0.05
CSNK1E-202ENST00000366216 SIPA1L3O60292 1781 aaPredicted RBP14.75□□□□□ -0.05
CSNK1E-202ENST00000366216 IL13P35225 146 aa14.74□□□□□ -0.05
CSNK1E-202ENST00000366216 SOGA3Q5TF21 947 aa14.74□□□□□ -0.05
CSNK1E-202ENST00000366216 ABT1Q9ULW3 272 aaKnown RBP14.74□□□□□ -0.05
CSNK1E-202ENST00000366216 EIF5P55010 431 aaKnown RBP14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 PRR5LQ6MZQ0 368 aa14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 PRPF40BQ6NWY9 871 aaKnown RBP14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 CNTROBQ8N137 903 aa14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 CNKSR1Q969H4 720 aa14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 BEGAINQ9BUH8 593 aa14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 HACL1Q9UJ83 578 aa14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 COL3A1P02461 1466 aaPredicted RBP14.73□□□□□ -0.05
CSNK1E-202ENST00000366216 RNMTO43148 476 aaKnown RBP14.72□□□□□ -0.05
CSNK1E-202ENST00000366216 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
CSNK1E-202ENST00000366216 EPHX2P34913 555 aa14.72□□□□□ -0.05
CSNK1E-202ENST00000366216 MAP1SQ66K74 1059 aaPredicted RBP14.72□□□□□ -0.05
CSNK1E-202ENST00000366216 NGEFQ8N5V2 710 aa14.72□□□□□ -0.05
CSNK1E-202ENST00000366216 ZNF541Q9H0D2 1346 aa14.71□□□□□ -0.05
CSNK1E-202ENST00000366216 AKAP11Q9UKA4 1901 aa14.71□□□□□ -0.05
CSNK1E-202ENST00000366216 STYK1Q6J9G0 422 aa14.71□□□□□ -0.05
CSNK1E-202ENST00000366216 PNMA8AQ86V59 439 aaPredicted RBP14.71□□□□□ -0.05
CSNK1E-202ENST00000366216 AKAP4Q5JQC9 854 aa14.7□□□□□ -0.06
CSNK1E-202ENST00000366216 C7orf43Q8WVR3 580 aa14.7□□□□□ -0.06
CSNK1E-202ENST00000366216 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
CSNK1E-202ENST00000366216 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
CSNK1E-202ENST00000366216 A0A087WZG4 1122 aa14.69□□□□□ -0.06
CSNK1E-202ENST00000366216 SRGNP10124 158 aa14.69□□□□□ -0.06
CSNK1E-202ENST00000366216 ECE1P42892 770 aa14.69□□□□□ -0.06
CSNK1E-202ENST00000366216 OLFM4Q6UX06 510 aa14.69□□□□□ -0.06
CSNK1E-202ENST00000366216 VSIG10Q8N0Z9 540 aa14.69□□□□□ -0.06
CSNK1E-202ENST00000366216 CAPNS2Q96L46 248 aa14.69□□□□□ -0.06
CSNK1E-202ENST00000366216 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
CSNK1E-202ENST00000366216 FMR1Q06787 632 aaKnown RBP eCLIP14.68□□□□□ -0.06
CSNK1E-202ENST00000366216 PAXIP1Q6ZW49 1069 aaPredicted RBP14.68□□□□□ -0.06
CSNK1E-202ENST00000366216 CNBD1Q8NA66 436 aa14.68□□□□□ -0.06
CSNK1E-202ENST00000366216 MASTLQ96GX5 879 aa14.68□□□□□ -0.06
CSNK1E-202ENST00000366216 DDX21Q9NR30 783 aaKnown RBP eCLIP14.68□□□□□ -0.06
CSNK1E-202ENST00000366216 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
CSNK1E-202ENST00000366216 NPHP1O15259 732 aa14.67□□□□□ -0.06
CSNK1E-202ENST00000366216 MTHFSDQ2M296 383 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-202ENST00000366216 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
CSNK1E-202ENST00000366216 RUNDC1Q96C34 613 aa14.67□□□□□ -0.06
CSNK1E-202ENST00000366216 GPR101Q96P66 508 aaPredicted RBP14.67□□□□□ -0.06
CSNK1E-202ENST00000366216 MCOLN1Q9GZU1 580 aa14.67□□□□□ -0.06
CSNK1E-202ENST00000366216 TSKSQ9UJT2 592 aa14.67□□□□□ -0.06
CSNK1E-202ENST00000366216 POLR2AP24928 1970 aaKnown RBP14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 COL4A5P29400 1685 aa14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 DIAPH1O60610 1272 aaKnown RBP14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 STARD3NLO95772 234 aa14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 ST5P78524 1137 aa14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 FKBP4Q02790 459 aaKnown RBP eCLIP14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 GRM1Q13255 1194 aa14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 CYP4F22Q6NT55 531 aa14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 SETDB2Q96T68 719 aa14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 ZNF277Q9NRM2 450 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms