RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 NHSL1Q5SYE7 1610 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 MYCP01106 439 aaPredicted RBP4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 LMOD1P29536 600 aaPredicted RBP4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 USP4Q13107 963 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 TRAF7Q6Q0C0 670 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 TXNDC2Q86VQ3 553 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 SNIP1Q8TAD8 396 aaKnown RBP4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 PGPEP1Q9NXJ5 209 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 TFIP11Q9UBB9 837 aaKnown RBP4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 RGS17Q9UGC6 210 aaPredicted RBP4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 NOD1Q9Y239 953 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 EMILIN1Q9Y6C2 1016 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 TLL2Q9Y6L7 1015 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 ACIN1Q9UKV3 1341 aaKnown RBP4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 TRPM2O94759 1503 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 IQGAP3Q86VI3 1631 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 MYO5BQ9ULV0 1848 aa4.86□□□□□ -1.63
RNU1-140P-201ENST00000365040 GDF9O60383 454 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 GIGYF1O75420 1035 aaPredicted RBP4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 ATG7O95352 703 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 KCNA6P17658 529 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 NCOA4Q13772 614 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 MEX3CQ5U5Q3 659 aaKnown RBP4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 CYP4X1Q8N118 509 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 VRTNQ9H8Y1 702 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 PCDHB11Q9Y5F2 797 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 WASF2Q9Y6W5 498 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 ZNF644Q9H582 1327 aaPredicted RBP4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 PIK3R4Q99570 1358 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 KIF15Q9NS87 1388 aa4.85□□□□□ -1.63
RNU1-140P-201ENST00000365040 PLEKHG1Q9ULL1 1385 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 PIK3CDO00329 1044 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 ERVK-9P63128 1117 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 ARID5BQ14865 1188 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 CC2D2BQ6DHV5 1058 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 B4GALNT3Q6L9W6 998 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 POTEAQ6S8J7 498 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 CYP2U1Q7Z449 544 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 PKD2L1Q9P0L9 805 aa4.84□□□□□ -1.63
RNU1-140P-201ENST00000365040 TMEM131LA2VDJ0 1609 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 LAMC1P11047 1609 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 NOS1P29475 1434 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 TTC24A2A3L6 582 aaPredicted RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L15C9J2P7 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L10C9JJH3 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L13C9JLJ4 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L12C9JPN9 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L11C9JVI0 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L21D6R901 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L18D6R9N7 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L22D6RA61 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L17D6RBQ6 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L19D6RCP7 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L20D6RJB6 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 CSB-PGBD3P0DP91 1061 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 GRM5P41594 1212 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 SRPK2P78362 688 aaKnown RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 MYT1Q01538 1121 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 USP17L24Q0WX57 530 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 NNTQ13423 1086 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 OXLD1Q5BKU9 147 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 LARP1Q6PKG0 1096 aaKnown RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 SIX5Q8N196 739 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 LARGE2Q8N3Y3 721 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 CCDC85AQ96PX6 553 aaPredicted RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 SLC52A1Q9NWF4 448 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 TOR4AQ9NXH8 423 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 SLAIN2Q9P270 581 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 MKRN1Q9UHC7 482 aaKnown RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 RBM19Q9Y4C8 960 aaKnown RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 SPHKAPQ2M3C7 1700 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 XRN1Q8IZH2 1706 aaKnown RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 MARF1Q9Y4F3 1742 aaKnown RBP4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 LRP6O75581 1613 aa4.83□□□□□ -1.64
RNU1-140P-201ENST00000365040 UNC13BO14795 1591 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 ASXL1Q8IXJ9 1541 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 ZFYVE9O95405 1425 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 VPS8Q8N3P4 1428 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 ANKRD30AQ9BXX3 1397 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 PATL2C9JE40 543 aaKnown RBP4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 ERVH48-1M5A8F1 160 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 WASLO00401 505 aaPredicted RBP4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 ALDH1A1P00352 501 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 LTKP29376 864 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 LAPTM4AQ15012 233 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 KANK4Q5T7N3 995 aaPredicted RBP4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 NALCNQ8IZF0 1738 aa4.82□□□□□ -1.64
RNU1-140P-201ENST00000365040 ADGRL2O95490 1459 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 DAPK1P53355 1430 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 SETD5Q9C0A6 1442 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 ATAD2Q6PL18 1390 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 M0R2N6 131 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 ATF3P18847 181 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 RFX1P22670 979 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 RXRBP28702 533 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 GTF2IP78347 998 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms