RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 SBF1O95248 1867 aa22.36■■□□□ 1.17
RAB3IP-202ENST00000362025 RALBP1Q15311 655 aa22.35■■□□□ 1.17
RAB3IP-202ENST00000362025 C16orf71Q8IYS4 520 aaPredicted RBP22.35■■□□□ 1.17
RAB3IP-202ENST00000362025 COL11A2P13942 1736 aaPredicted RBP22.34■■□□□ 1.17
RAB3IP-202ENST00000362025 CEP350Q5VT06 3117 aa22.34■■□□□ 1.17
RAB3IP-202ENST00000362025 SRGNP10124 158 aa22.34■■□□□ 1.17
RAB3IP-202ENST00000362025 EIF4A1P60842 406 aaKnown RBP22.34■■□□□ 1.17
RAB3IP-202ENST00000362025 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
RAB3IP-202ENST00000362025 NIP7Q9Y221 180 aaKnown RBP eCLIP22.34■■□□□ 1.17
RAB3IP-202ENST00000362025 DLG5Q8TDM6 1919 aa22.34■■□□□ 1.17
RAB3IP-202ENST00000362025 HLFQ16534 295 aa22.33■■□□□ 1.17
RAB3IP-202ENST00000362025 STYK1Q6J9G0 422 aa22.33■■□□□ 1.17
RAB3IP-202ENST00000362025 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
RAB3IP-202ENST00000362025 RBM46Q8TBY0 533 aaKnown RBP22.33■■□□□ 1.17
RAB3IP-202ENST00000362025 ZC3H4Q9UPT8 1303 aaKnown RBP22.33■■□□□ 1.16
RAB3IP-202ENST00000362025 CNKSR1Q969H4 720 aa22.32■■□□□ 1.16
RAB3IP-202ENST00000362025 FAM177BA6PVY3 158 aa22.32■■□□□ 1.16
RAB3IP-202ENST00000362025 MASTLQ96GX5 879 aa22.31■■□□□ 1.16
RAB3IP-202ENST00000362025 RGL2O15211 777 aa22.3■■□□□ 1.16
RAB3IP-202ENST00000362025 APLP1P51693 650 aa22.3■■□□□ 1.16
RAB3IP-202ENST00000362025 PRPF40BQ6NWY9 871 aaKnown RBP22.3■■□□□ 1.16
RAB3IP-202ENST00000362025 RRP7AQ9Y3A4 280 aaKnown RBP22.3■■□□□ 1.16
RAB3IP-202ENST00000362025 KDM3BQ7LBC6 1761 aa22.3■■□□□ 1.16
RAB3IP-202ENST00000362025 TPTE2Q6XPS3 522 aa22.3■■□□□ 1.16
RAB3IP-202ENST00000362025 GLTPD2A6NH11 291 aa22.29■■□□□ 1.16
RAB3IP-202ENST00000362025 RIPK4P57078 832 aa22.29■■□□□ 1.16
RAB3IP-202ENST00000362025 LAMB4A4D0S4 1761 aa22.28■■□□□ 1.16
RAB3IP-202ENST00000362025 MYL6BP14649 208 aa22.28■■□□□ 1.16
RAB3IP-202ENST00000362025 TTLL7Q6ZT98 887 aa22.27■■□□□ 1.16
RAB3IP-202ENST00000362025 TAOK3Q9H2K8 898 aa22.27■■□□□ 1.16
RAB3IP-202ENST00000362025 TSPYL4Q9UJ04 414 aa22.27■■□□□ 1.16
RAB3IP-202ENST00000362025 ERFEQ4G0M1 354 aa22.26■■□□□ 1.15
RAB3IP-202ENST00000362025 MYBBP1AQ9BQG0 1328 aaKnown RBP22.26■■□□□ 1.15
RAB3IP-202ENST00000362025 TNRC6CQ9HCJ0 1690 aaKnown RBP22.26■■□□□ 1.15
RAB3IP-202ENST00000362025 SLX4Q8IY92 1834 aa22.26■■□□□ 1.15
RAB3IP-202ENST00000362025 KLRG2A4D1S0 409 aaPredicted RBP22.26■■□□□ 1.15
RAB3IP-202ENST00000362025 NPR1P16066 1061 aa22.26■■□□□ 1.15
RAB3IP-202ENST00000362025 FSTL1Q12841 308 aa22.26■■□□□ 1.15
RAB3IP-202ENST00000362025 ERVV-1B6SEH8 477 aa22.25■■□□□ 1.15
RAB3IP-202ENST00000362025 GTF2E1P29083 439 aaPredicted RBP22.25■■□□□ 1.15
RAB3IP-202ENST00000362025 TMPOP42166 694 aaKnown RBP22.25■■□□□ 1.15
RAB3IP-202ENST00000362025 KIF6Q6ZMV9 814 aa22.25■■□□□ 1.15
RAB3IP-202ENST00000362025 MAP3K15Q6ZN16 1313 aa22.25■■□□□ 1.15
RAB3IP-202ENST00000362025 LTBP3Q9NS15 1303 aa22.25■■□□□ 1.15
RAB3IP-202ENST00000362025 VEGFAP15692 232 aaPredicted RBP22.24■■□□□ 1.15
RAB3IP-202ENST00000362025 SOGA3Q5TF21 947 aa22.24■■□□□ 1.15
RAB3IP-202ENST00000362025 TIAM2Q8IVF5 1701 aa22.24■■□□□ 1.15
RAB3IP-202ENST00000362025 CCDC146Q8IYE0 955 aa22.24■■□□□ 1.15
RAB3IP-202ENST00000362025 C7orf43Q8WVR3 580 aa22.24■■□□□ 1.15
RAB3IP-202ENST00000362025 ZBTB3Q9H5J0 574 aa22.24■■□□□ 1.15
RAB3IP-202ENST00000362025 DPY19L2Q6NUT2 758 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 FER1L6Q2WGJ9 1857 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 CCDC88AQ3V6T2 1871 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 GPTP24298 496 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 HTRA3P83110 453 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 NUTM1Q86Y26 1132 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 DNAJC5GQ8N7S2 189 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 SMC1BQ8NDV3 1235 aa22.22■■□□□ 1.15
RAB3IP-202ENST00000362025 LMOD3Q0VAK6 560 aa22.21■■□□□ 1.15
RAB3IP-202ENST00000362025 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
RAB3IP-202ENST00000362025 EIF2S2P20042 333 aaKnown RBP22.21■■□□□ 1.15
RAB3IP-202ENST00000362025 CCDC93Q567U6 631 aa22.21■■□□□ 1.15
RAB3IP-202ENST00000362025 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
RAB3IP-202ENST00000362025 NYXQ9GZU5 481 aa22.21■■□□□ 1.15
RAB3IP-202ENST00000362025 ABCC12Q96J65 1359 aa22.2■■□□□ 1.15
RAB3IP-202ENST00000362025 ERBB4Q15303 1308 aa22.2■■□□□ 1.14
RAB3IP-202ENST00000362025 POTECB2RU33 542 aa22.2■■□□□ 1.14
RAB3IP-202ENST00000362025 CACNA1SQ13698 1873 aa22.2■■□□□ 1.14
RAB3IP-202ENST00000362025 UBN2Q6ZU65 1347 aa22.19■■□□□ 1.14
RAB3IP-202ENST00000362025 BABAM1Q9NWV8 329 aa22.19■■□□□ 1.14
RAB3IP-202ENST00000362025 ARFGEF2Q9Y6D5 1785 aa22.19■■□□□ 1.14
RAB3IP-202ENST00000362025 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
RAB3IP-202ENST00000362025 PDIA6Q15084 440 aa22.18■■□□□ 1.14
RAB3IP-202ENST00000362025 PROSER3Q2NL68 480 aa22.18■■□□□ 1.14
RAB3IP-202ENST00000362025 SUSD4Q5VX71 490 aa22.18■■□□□ 1.14
RAB3IP-202ENST00000362025 ANXA1P04083 346 aa22.17■■□□□ 1.14
RAB3IP-202ENST00000362025 ALDH1B1P30837 517 aa22.17■■□□□ 1.14
RAB3IP-202ENST00000362025 LRP10Q7Z4F1 713 aa22.17■■□□□ 1.14
RAB3IP-202ENST00000362025 ZNF34Q8IZ26 560 aa22.17■■□□□ 1.14
RAB3IP-202ENST00000362025 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
RAB3IP-202ENST00000362025 DDNO94850 711 aaPredicted RBP22.16■■□□□ 1.14
RAB3IP-202ENST00000362025 CRY2Q49AN0 593 aa22.16■■□□□ 1.14
RAB3IP-202ENST00000362025 GIGYF2Q6Y7W6 1299 aaKnown RBP22.16■■□□□ 1.14
RAB3IP-202ENST00000362025 NECTIN2Q92692 538 aa22.16■■□□□ 1.14
RAB3IP-202ENST00000362025 FKBP4Q02790 459 aaKnown RBP eCLIP22.16■■□□□ 1.14
RAB3IP-202ENST00000362025 ZNF277Q9NRM2 450 aaPredicted RBP22.16■■□□□ 1.14
RAB3IP-202ENST00000362025 WDR90Q96KV7 1748 aa22.15■■□□□ 1.14
RAB3IP-202ENST00000362025 ADAMTS8Q9UP79 889 aa22.15■■□□□ 1.14
RAB3IP-202ENST00000362025 NUP98P52948 1817 aa22.15■■□□□ 1.14
RAB3IP-202ENST00000362025 RTKN2Q8IZC4 609 aa22.15■■□□□ 1.14
RAB3IP-202ENST00000362025 TRIM35Q9UPQ4 493 aa22.15■■□□□ 1.14
RAB3IP-202ENST00000362025 LAS1LQ9Y4W2 734 aaKnown RBP22.15■■□□□ 1.14
RAB3IP-202ENST00000362025 DICER1Q9UPY3 1922 aaKnown RBP22.14■■□□□ 1.14
RAB3IP-202ENST00000362025 IBTKQ9P2D0 1353 aaPredicted RBP22.14■■□□□ 1.14
RAB3IP-202ENST00000362025 KRT24Q2M2I5 525 aa22.14■■□□□ 1.13
RAB3IP-202ENST00000362025 CHL1O00533 1208 aa22.13■■□□□ 1.13
RAB3IP-202ENST00000362025 NTSR2O95665 410 aa22.13■■□□□ 1.13
RAB3IP-202ENST00000362025 RPGRQ92834 1020 aaKnown RBP22.13■■□□□ 1.13
RAB3IP-202ENST00000362025 PRKRIP1Q9H875 184 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms