RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 EVA1CP58658 441 aa20.83■□□□□ 0.93
SMG5-201ENST00000361813 LRRC2Q9BYS8 371 aa20.83■□□□□ 0.92
SMG5-201ENST00000361813 GTPBP4Q9BZE4 634 aaKnown RBP20.83■□□□□ 0.92
SMG5-201ENST00000361813 TSPYL1Q9H0U9 437 aa20.83■□□□□ 0.92
SMG5-201ENST00000361813 NUP133Q8WUM0 1156 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 PIBF1Q8WXW3 757 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 CCDC85AQ96PX6 553 aaPredicted RBP20.82■□□□□ 0.92
SMG5-201ENST00000361813 CCDC171Q6TFL3 1326 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 EPB41L2O43491 1005 aaKnown RBP20.82■□□□□ 0.92
SMG5-201ENST00000361813 CD2BP2O95400 341 aaKnown RBP20.82■□□□□ 0.92
SMG5-201ENST00000361813 MYRIPQ8NFW9 859 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 BRF1Q92994 677 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 NEK1Q96PY6 1258 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 USP19O94966 1318 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 POLR3DP05423 398 aaPredicted RBP20.82■□□□□ 0.92
SMG5-201ENST00000361813 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
SMG5-201ENST00000361813 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.82■□□□□ 0.927e-7■■■■□ 21.6
SMG5-201ENST00000361813 CDKL5O76039 1030 aa20.81■□□□□ 0.92
SMG5-201ENST00000361813 CASQ1P31415 396 aa20.81■□□□□ 0.92
SMG5-201ENST00000361813 IMMTQ16891 758 aaKnown RBP20.81■□□□□ 0.92
SMG5-201ENST00000361813 KLHL10Q6JEL2 608 aa20.81■□□□□ 0.92
SMG5-201ENST00000361813 MPRIPQ6WCQ1 1025 aa20.81■□□□□ 0.92
SMG5-201ENST00000361813 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
SMG5-201ENST00000361813 KIF4BQ2VIQ3 1234 aa20.81■□□□□ 0.92
SMG5-201ENST00000361813 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
SMG5-201ENST00000361813 ADGRL2O95490 1459 aa20.8■□□□□ 0.92
SMG5-201ENST00000361813 ZNHIT6Q9NWK9 470 aaKnown RBP20.8■□□□□ 0.92
SMG5-201ENST00000361813 MAGEC2Q9UBF1 373 aaPredicted RBP20.8■□□□□ 0.92
SMG5-201ENST00000361813 CCDC69A6NI79 296 aa20.8■□□□□ 0.92
SMG5-201ENST00000361813 ZSWIM4Q9H7M6 989 aa20.8■□□□□ 0.92
SMG5-201ENST00000361813 CNNM1Q9NRU3 951 aa20.8■□□□□ 0.92
SMG5-201ENST00000361813 A0A1W2PP64 1363 aa20.8■□□□□ 0.92
SMG5-201ENST00000361813 RIOK3O14730 519 aaKnown RBP20.8■□□□□ 0.92
SMG5-201ENST00000361813 DBF4Q9UBU7 674 aaPredicted RBP20.8■□□□□ 0.92
SMG5-201ENST00000361813 SHANK2Q9UPX8 1470 aa20.8■□□□□ 0.92
SMG5-201ENST00000361813 PIP4K2AP48426 406 aaPredicted RBP20.8■□□□□ 0.92
SMG5-201ENST00000361813 GCC2Q8IWJ2 1684 aa20.79■□□□□ 0.92
SMG5-201ENST00000361813 GSPT1P15170 499 aaKnown RBP20.79■□□□□ 0.92
SMG5-201ENST00000361813 CCDC57Q2TAC2 916 aa20.79■□□□□ 0.92
SMG5-201ENST00000361813 CPLX3Q8WVH0 158 aa20.79■□□□□ 0.92
SMG5-201ENST00000361813 HMGB1P09429 215 aaKnown RBP20.79■□□□□ 0.92
SMG5-201ENST00000361813 U2AF2P26368 475 aaKnown RBP eCLIP20.79■□□□□ 0.927e-7■■■□□ 19
SMG5-201ENST00000361813 TIGD1Q96MW7 591 aa20.79■□□□□ 0.92
SMG5-201ENST00000361813 LARP1Q6PKG0 1096 aaKnown RBP20.78■□□□□ 0.92
SMG5-201ENST00000361813 MYD88Q99836 296 aa20.78■□□□□ 0.92
SMG5-201ENST00000361813 MAP3K2Q9Y2U5 619 aa20.78■□□□□ 0.92
SMG5-201ENST00000361813 ZNF500O60304 480 aaPredicted RBP20.78■□□□□ 0.92
SMG5-201ENST00000361813 FAM173BQ6P4H8 233 aa20.78■□□□□ 0.92
SMG5-201ENST00000361813 DNAI1Q9UI46 699 aa20.78■□□□□ 0.92
SMG5-201ENST00000361813 JAKMIP3Q5VZ66 844 aa20.78■□□□□ 0.92
SMG5-201ENST00000361813 NPHP3Q7Z494 1330 aa20.78■□□□□ 0.92
SMG5-201ENST00000361813 TXLNAP40222 546 aa20.78■□□□□ 0.92
SMG5-201ENST00000361813 RAD21O60216 631 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 TATP17735 454 aaPredicted RBP20.77■□□□□ 0.92
SMG5-201ENST00000361813 RAB11FIP4Q86YS3 637 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 ZSCAN16Q9H4T2 348 aaPredicted RBP20.77■□□□□ 0.92
SMG5-201ENST00000361813 KDM5CP41229 1560 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 TRAPPC8Q9Y2L5 1435 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 GNG11P61952 73 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 G2E3Q7L622 706 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 AOPEPQ8N6M6 819 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
SMG5-201ENST00000361813 EIF4A2Q14240 407 aaKnown RBP20.77■□□□□ 0.92
SMG5-201ENST00000361813 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.91
SMG5-201ENST00000361813 SLU7O95391 586 aaKnown RBP20.76■□□□□ 0.91
SMG5-201ENST00000361813 CCDC82Q8N4S0 544 aa20.76■□□□□ 0.91
SMG5-201ENST00000361813 GPT2Q8TD30 523 aa20.76■□□□□ 0.91
SMG5-201ENST00000361813 MSH6P52701 1360 aa20.76■□□□□ 0.91
SMG5-201ENST00000361813 FOXO3O43524 673 aa20.76■□□□□ 0.91
SMG5-201ENST00000361813 KIF5CO60282 957 aa20.76■□□□□ 0.91
SMG5-201ENST00000361813 IDH1O75874 414 aaKnown RBP20.76■□□□□ 0.91
SMG5-201ENST00000361813 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
SMG5-201ENST00000361813 IFIT1P09914 478 aaKnown RBP20.75■□□□□ 0.91
SMG5-201ENST00000361813 RDXP35241 583 aaKnown RBP20.75■□□□□ 0.91
SMG5-201ENST00000361813 CDR1P51861 262 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 GOLGA8BA8MQT2 603 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 CNNM3Q8NE01 707 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 PUS7Q96PZ0 661 aaKnown RBP20.75■□□□□ 0.91
SMG5-201ENST00000361813 BRD1O95696 1058 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 LMAN1P49257 510 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 CABP4P57796 275 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 ZFP91Q96JP5 570 aaPredicted RBP20.75■□□□□ 0.91
SMG5-201ENST00000361813 HMG20BQ9P0W2 317 aa20.75■□□□□ 0.91
SMG5-201ENST00000361813 TTC21BQ7Z4L5 1316 aa20.74■□□□□ 0.91
SMG5-201ENST00000361813 CCDC150Q8NCX0 1101 aa20.74■□□□□ 0.91
SMG5-201ENST00000361813 PA2G4Q9UQ80 394 aaKnown RBP20.74■□□□□ 0.91
SMG5-201ENST00000361813 HSP90AA4PQ58FG1 418 aa20.74■□□□□ 0.91
SMG5-201ENST00000361813 FEZ1Q99689 392 aa20.74■□□□□ 0.91
SMG5-201ENST00000361813 ORC3Q9UBD5 711 aaPredicted RBP20.74■□□□□ 0.91
SMG5-201ENST00000361813 BBXQ8WY36 941 aaPredicted RBP20.74■□□□□ 0.91
SMG5-201ENST00000361813 JARID2Q92833 1246 aaPredicted RBP20.74■□□□□ 0.91
SMG5-201ENST00000361813 OGFRQ9NZT2 677 aa20.74■□□□□ 0.91
SMG5-201ENST00000361813 FANCAO15360 1455 aa20.74■□□□□ 0.91
SMG5-201ENST00000361813 GOLIM4O00461 696 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 KIAA0556O60303 1618 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 PLCH2O75038 1416 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 HAND2P61296 217 aa20.73■□□□□ 0.91
SMG5-201ENST00000361813 CCDC181Q5TID7 509 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms