RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 NEK4P51957 841 aa24.47■■□□□ 1.51
CHD1L-201ENST00000361293 ZGPATQ8N5A5 531 aaKnown RBP24.47■■□□□ 1.51
CHD1L-201ENST00000361293 MYD88Q99836 296 aa24.47■■□□□ 1.51
CHD1L-201ENST00000361293 SLAIN2Q9P270 581 aa24.47■■□□□ 1.51
CHD1L-201ENST00000361293 FMNL2Q96PY5 1086 aa24.46■■□□□ 1.51
CHD1L-201ENST00000361293 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
CHD1L-201ENST00000361293 WDR17Q8IZU2 1322 aa24.46■■□□□ 1.51
CHD1L-201ENST00000361293 USP42Q9H9J4 1324 aaKnown RBP24.46■■□□□ 1.51
CHD1L-201ENST00000361293 PKP1Q13835 747 aa24.45■■□□□ 1.51
CHD1L-201ENST00000361293 TOM1L2Q6ZVM7 507 aa24.45■■□□□ 1.51
CHD1L-201ENST00000361293 CLASRPQ8N2M8 674 aaKnown RBP24.45■■□□□ 1.51
CHD1L-201ENST00000361293 GBP4Q96PP9 640 aa24.45■■□□□ 1.51
CHD1L-201ENST00000361293 GCKRQ14397 625 aa24.45■■□□□ 1.5
CHD1L-201ENST00000361293 METTL22Q9BUU2 404 aaPredicted RBP24.45■■□□□ 1.5
CHD1L-201ENST00000361293 SASH1O94885 1247 aa24.44■■□□□ 1.5
CHD1L-201ENST00000361293 NEXNQ0ZGT2 675 aa24.44■■□□□ 1.5
CHD1L-201ENST00000361293 EPHA10Q5JZY3 1008 aa24.44■■□□□ 1.5
CHD1L-201ENST00000361293 ANKRD13DQ6ZTN6 518 aa24.44■■□□□ 1.5
CHD1L-201ENST00000361293 JARID2Q92833 1246 aaPredicted RBP24.44■■□□□ 1.5
CHD1L-201ENST00000361293 COL5A2P05997 1499 aaPredicted RBP24.44■■□□□ 1.5
CHD1L-201ENST00000361293 PARP4Q9UKK3 1724 aaKnown RBP24.44■■□□□ 1.5
CHD1L-201ENST00000361293 TTC41PQ6P2S7 1318 aa24.43■■□□□ 1.5
CHD1L-201ENST00000361293 CNTROBQ8N137 903 aa24.43■■□□□ 1.5
CHD1L-201ENST00000361293 KLHDC4Q8TBB5 520 aa24.43■■□□□ 1.5
CHD1L-201ENST00000361293 HDAC5Q9UQL6 1122 aa24.43■■□□□ 1.5
CHD1L-201ENST00000361293 MCCP23508 829 aa24.43■■□□□ 1.5
CHD1L-201ENST00000361293 SGSM2O43147 1006 aa24.42■■□□□ 1.5
CHD1L-201ENST00000361293 KDM4FA0A1W2PPD8 638 aa24.42■■□□□ 1.5
CHD1L-201ENST00000361293 GLRX3O76003 335 aaKnown RBP24.42■■□□□ 1.5
CHD1L-201ENST00000361293 SIL1Q9H173 461 aa24.42■■□□□ 1.5
CHD1L-201ENST00000361293 ANAPC15P60006 121 aa24.41■■□□□ 1.5
CHD1L-201ENST00000361293 AACSQ86V21 672 aa24.41■■□□□ 1.5
CHD1L-201ENST00000361293 ERC1Q8IUD2 1116 aa24.41■■□□□ 1.5
CHD1L-201ENST00000361293 ZCRB1Q8TBF4 217 aaKnown RBP24.41■■□□□ 1.5
CHD1L-201ENST00000361293 ARXQ96QS3 562 aa24.41■■□□□ 1.5
CHD1L-201ENST00000361293 ABCA3Q99758 1704 aa24.4■■□□□ 1.5
CHD1L-201ENST00000361293 UPF3BQ9BZI7 483 aaKnown RBP24.4■■□□□ 1.5
CHD1L-201ENST00000361293 ECHDC1Q9NTX5 307 aa24.4■■□□□ 1.5
CHD1L-201ENST00000361293 PCDH11XQ9BZA7 1347 aa24.4■■□□□ 1.5
CHD1L-201ENST00000361293 PCDH11YQ9BZA8 1340 aa24.4■■□□□ 1.5
CHD1L-201ENST00000361293 CYP2E1P05181 493 aaPredicted RBP24.4■■□□□ 1.5
CHD1L-201ENST00000361293 IFIT2P09913 472 aaKnown RBP24.4■■□□□ 1.5
CHD1L-201ENST00000361293 CWC27Q6UX04 472 aaKnown RBP24.4■■□□□ 1.5
CHD1L-201ENST00000361293 EAF2Q96CJ1 260 aaPredicted RBP24.4■■□□□ 1.5
CHD1L-201ENST00000361293 TMX3Q96JJ7 454 aa24.4■■□□□ 1.5
CHD1L-201ENST00000361293 ARFGEF2Q9Y6D5 1785 aa24.39■■□□□ 1.5
CHD1L-201ENST00000361293 LAMB4A4D0S4 1761 aa24.39■■□□□ 1.49
CHD1L-201ENST00000361293 HSPA4P34932 840 aa24.39■■□□□ 1.49
CHD1L-201ENST00000361293 NOL8Q76FK4 1167 aaKnown RBP24.39■■□□□ 1.49
CHD1L-201ENST00000361293 IL17RAQ96F46 866 aa24.39■■□□□ 1.49
CHD1L-201ENST00000361293 TLR7Q9NYK1 1049 aaKnown RBP24.39■■□□□ 1.49
CHD1L-201ENST00000361293 AFDNP55196 1824 aaKnown RBP24.39■■□□□ 1.49
CHD1L-201ENST00000361293 ATP5J2-PTCD1G3V325 749 aa24.38■■□□□ 1.49
CHD1L-201ENST00000361293 PTCD1O75127 700 aaKnown RBP24.38■■□□□ 1.49
CHD1L-201ENST00000361293 CLEC17AQ6ZS10 378 aa24.38■■□□□ 1.49
CHD1L-201ENST00000361293 RAD50Q92878 1312 aa24.38■■□□□ 1.49
CHD1L-201ENST00000361293 BAG4O95429 457 aaKnown RBP24.38■■□□□ 1.49
CHD1L-201ENST00000361293 G3BP1Q13283 466 aaKnown RBP eCLIP24.38■■□□□ 1.492e-7■□□□□ 8.3
CHD1L-201ENST00000361293 LSG1Q9H089 658 aaKnown RBP24.38■■□□□ 1.49
CHD1L-201ENST00000361293 CCDC8Q9H0W5 538 aaPredicted RBP24.37■■□□□ 1.49
CHD1L-201ENST00000361293 NBPF26B4DH59 902 aa24.37■■□□□ 1.49
CHD1L-201ENST00000361293 NBPF14Q5TI25 921 aa24.37■■□□□ 1.49
CHD1L-201ENST00000361293 NBPF10Q6P3W6 841 aaKnown RBP24.37■■□□□ 1.49
CHD1L-201ENST00000361293 NBPF15Q8N660 670 aa24.37■■□□□ 1.49
CHD1L-201ENST00000361293 STRN4Q9NRL3 753 aa24.37■■□□□ 1.49
CHD1L-201ENST00000361293 CWC22Q9HCG8 908 aaKnown RBP24.36■■□□□ 1.49
CHD1L-201ENST00000361293 SHANK3Q9BYB0 1731 aa24.36■■□□□ 1.49
CHD1L-201ENST00000361293 NUCB2P80303 420 aa24.36■■□□□ 1.49
CHD1L-201ENST00000361293 UBE3BQ7Z3V4 1068 aa24.36■■□□□ 1.49
CHD1L-201ENST00000361293 FSD2A1L4K1 749 aa24.35■■□□□ 1.49
CHD1L-201ENST00000361293 ZDHHC9Q9Y397 364 aa24.35■■□□□ 1.49
CHD1L-201ENST00000361293 DDX54Q8TDD1 881 aaKnown RBP24.35■■□□□ 1.49
CHD1L-201ENST00000361293 EPB41L2O43491 1005 aaKnown RBP24.34■■□□□ 1.49
CHD1L-201ENST00000361293 IL2RBP14784 551 aa24.34■■□□□ 1.49
CHD1L-201ENST00000361293 GPATCH3Q96I76 525 aa24.34■■□□□ 1.49
CHD1L-201ENST00000361293 UBR2Q8IWV8 1755 aa24.34■■□□□ 1.49
CHD1L-201ENST00000361293 RASEFQ8IZ41 740 aa24.33■■□□□ 1.49
CHD1L-201ENST00000361293 CARD10Q9BWT7 1032 aa24.33■■□□□ 1.49
CHD1L-201ENST00000361293 DIAPH3Q9NSV4 1193 aa24.33■■□□□ 1.49
CHD1L-201ENST00000361293 KCPQ6ZWJ8 1503 aa24.33■■□□□ 1.48
CHD1L-201ENST00000361293 SNX14Q9Y5W7 946 aa24.33■■□□□ 1.48
CHD1L-201ENST00000361293 GOLGA6L3A6NEY3 463 aa24.32■■□□□ 1.48
CHD1L-201ENST00000361293 MCM2P49736 904 aa24.32■■□□□ 1.48
CHD1L-201ENST00000361293 PLBD2Q8NHP8 589 aa24.32■■□□□ 1.48
CHD1L-201ENST00000361293 A0A087WZG4 1122 aa24.32■■□□□ 1.48
CHD1L-201ENST00000361293 RFX5P48382 616 aaPredicted RBP24.32■■□□□ 1.48
CHD1L-201ENST00000361293 TTLL7Q6ZT98 887 aa24.32■■□□□ 1.48
CHD1L-201ENST00000361293 ERVV-2B6SEH9 535 aa24.31■■□□□ 1.48
CHD1L-201ENST00000361293 CUL4AQ13619 759 aa24.31■■□□□ 1.48
CHD1L-201ENST00000361293 A1BGP04217 495 aa24.3■■□□□ 1.48
CHD1L-201ENST00000361293 NKX1-1Q15270 411 aaPredicted RBP24.3■■□□□ 1.48
CHD1L-201ENST00000361293 CASP7P55210 303 aa24.3■■□□□ 1.48
CHD1L-201ENST00000361293 PTH1RQ03431 593 aa24.3■■□□□ 1.48
CHD1L-201ENST00000361293 L1TD1Q5T7N2 865 aaKnown RBP24.3■■□□□ 1.48
CHD1L-201ENST00000361293 EVI5LQ96CN4 794 aa24.3■■□□□ 1.48
CHD1L-201ENST00000361293 CHAMP1Q96JM3 812 aa24.3■■□□□ 1.48
CHD1L-201ENST00000361293 PAPPAQ13219 1627 aa24.3■■□□□ 1.48
CHD1L-201ENST00000361293 XRCC6P12956 609 aaKnown RBP eCLIP24.29■■□□□ 1.48
CHD1L-201ENST00000361293 PTPN12Q05209 780 aaKnown RBP24.29■■□□□ 1.48
CHD1L-201ENST00000361293 MCTP1Q6DN14 999 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms