RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 DHX29Q7Z478 1369 aaKnown RBP10.65□□□□□ -0.7
VPS13A-203ENST00000360280 HMGB2P26583 209 aaKnown RBP10.65□□□□□ -0.7
VPS13A-203ENST00000360280 IFT74Q96LB3 600 aa10.65□□□□□ -0.7
VPS13A-203ENST00000360280 NKTRP30414 1462 aaKnown RBP10.65□□□□□ -0.7
VPS13A-203ENST00000360280 BAG4O95429 457 aaKnown RBP10.65□□□□□ -0.7
VPS13A-203ENST00000360280 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-203ENST00000360280 STRN4Q9NRL3 753 aa10.65□□□□□ -0.7
VPS13A-203ENST00000360280 LACTBP83111 547 aaPredicted RBP10.65□□□□□ -0.71
VPS13A-203ENST00000360280 TCERG1LQ5VWI1 586 aa10.65□□□□□ -0.71
VPS13A-203ENST00000360280 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.71
VPS13A-203ENST00000360280 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.71
VPS13A-203ENST00000360280 STMN1P16949 149 aa10.65□□□□□ -0.71
VPS13A-203ENST00000360280 SF3B2Q13435 895 aaKnown RBP10.65□□□□□ -0.71
VPS13A-203ENST00000360280 TRMT1Q9NXH9 659 aaKnown RBP10.65□□□□□ -0.71
VPS13A-203ENST00000360280 RAB11FIP3O75154 756 aa10.65□□□□□ -0.71
VPS13A-203ENST00000360280 SARNPP82979 210 aaKnown RBP10.65□□□□□ -0.71
VPS13A-203ENST00000360280 DZIP1Q86YF9 867 aaKnown RBP10.65□□□□□ -0.71
VPS13A-203ENST00000360280 CUL5Q93034 780 aa10.65□□□□□ -0.71
VPS13A-203ENST00000360280 TCP11L1Q9NUJ3 509 aa10.65□□□□□ -0.71
VPS13A-203ENST00000360280 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
VPS13A-203ENST00000360280 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-203ENST00000360280 ALDH3A1P30838 453 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 MTHFSP49914 203 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 PSMD1Q99460 953 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.64□□□□□ -0.719e-7■■□□□ 14
VPS13A-203ENST00000360280 JAKMIP2Q96AA8 810 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 SAMD15Q9P1V8 674 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 PRC1O43663 620 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 USP25Q9UHP3 1055 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 NAA25Q14CX7 972 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 IQCA1Q86XH1 822 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 CCDC114Q96M63 670 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 LRRC27Q9C0I9 530 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 RMND1Q9NWS8 449 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 GBP7Q8N8V2 638 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-203ENST00000360280 TRIM7Q9C029 511 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 FGD6Q6ZV73 1430 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 CCDC194A0A1B0GVG4 234 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 PRKAR2BP31323 418 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 ZMYND15Q9H091 742 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 CACNA2D3Q8IZS8 1091 aa10.64□□□□□ -0.71
VPS13A-203ENST00000360280 RNF168Q8IYW5 571 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-203ENST00000360280 ATRIPQ8WXE1 791 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 UBE2HP62256 183 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 RASSF4Q9H2L5 321 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 EXOSC9Q06265 439 aaKnown RBP10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CCDC40Q4G0X9 1142 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CYLC1P35663 651 aaPredicted RBP10.63□□□□□ -0.71
VPS13A-203ENST00000360280 SSRP1Q08945 709 aaKnown RBP10.63□□□□□ -0.71
VPS13A-203ENST00000360280 UVSSAQ2YD98 709 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 PPFIBP2Q8ND30 876 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 GNG11P61952 73 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CPLX4Q7Z7G2 160 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 SLC12A7Q9Y666 1083 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 SNX16P57768 344 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 EPSTI1Q96J88 318 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CCDC63Q8NA47 563 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CTAGE15A4D2H0 777 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CTAGE8P0CG41 777 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CFAP157Q5JU67 520 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 NBPF11Q86T75 865 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CTAGE6Q86UF2 777 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 WDR63Q8IWG1 891 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CTAGE4Q8IX94 777 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 TUBBP07437 444 aa10.63□□□□□ -0.71
VPS13A-203ENST00000360280 CASQ2O14958 399 aaPredicted RBP10.62□□□□□ -0.71
VPS13A-203ENST00000360280 SH3BGRP55822 239 aaPredicted RBP10.62□□□□□ -0.71
VPS13A-203ENST00000360280 GOLGA1Q92805 767 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 ADAMTS8Q9UP79 889 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 RABGAP1Q9Y3P9 1069 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 GLRX3O76003 335 aaKnown RBP10.62□□□□□ -0.71
VPS13A-203ENST00000360280 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 B4GALNT4Q76KP1 1039 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.62□□□□□ -0.713e-6■■■■□ 26.1
VPS13A-203ENST00000360280 CCDC50Q8IVM0 306 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 NAPBQ9H115 298 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 LIG1P18858 919 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 TMOD2Q9NZR1 351 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 TCHPQ9BT92 498 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 ATP2C2O75185 946 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 SH2D4BQ5SQS7 431 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 RPGRIP1LQ68CZ1 1315 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 RGS22Q8NE09 1264 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 ATP5DP30049 168 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 RNF41Q9H4P4 317 aaPredicted RBP10.62□□□□□ -0.71
VPS13A-203ENST00000360280 CKAP2LQ8IYA6 745 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 ARFGAP2Q8N6H7 521 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 TXNDC16Q9P2K2 825 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 CEP128Q6ZU80 1094 aa10.62□□□□□ -0.71
VPS13A-203ENST00000360280 FAM177BA6PVY3 158 aa10.61□□□□□ -0.71
VPS13A-203ENST00000360280 KRT86O43790 486 aa10.61□□□□□ -0.71
VPS13A-203ENST00000360280 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
VPS13A-203ENST00000360280 GBP1P32455 592 aa10.61□□□□□ -0.71
VPS13A-203ENST00000360280 VCXQ9H320 206 aa10.61□□□□□ -0.71
VPS13A-203ENST00000360280 IDH1O75874 414 aaKnown RBP10.61□□□□□ -0.71
VPS13A-203ENST00000360280 SYNCQ9H7C4 482 aa10.61□□□□□ -0.71
VPS13A-203ENST00000360280 MYO1BO43795 1136 aa10.61□□□□□ -0.71
VPS13A-203ENST00000360280 RPAP2Q8IXW5 612 aaPredicted RBP10.61□□□□□ -0.71
VPS13A-203ENST00000360280 SYCP3Q8IZU3 236 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms