RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
SIRPA-202ENST00000358771 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
SIRPA-202ENST00000358771 TMEM131LA2VDJ0 1609 aa17.03■□□□□ 0.32
SIRPA-202ENST00000358771 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
SIRPA-202ENST00000358771 LMBR1LQ6UX01 489 aa17.02■□□□□ 0.32
SIRPA-202ENST00000358771 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.32
SIRPA-202ENST00000358771 DDX21Q9NR30 783 aaKnown RBP eCLIP17.02■□□□□ 0.32
SIRPA-202ENST00000358771 CNNM1Q9NRU3 951 aa17.02■□□□□ 0.32
SIRPA-202ENST00000358771 CPLX1O14810 134 aa17.02■□□□□ 0.32
SIRPA-202ENST00000358771 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
SIRPA-202ENST00000358771 PTCH1Q13635 1447 aa17.02■□□□□ 0.31
SIRPA-202ENST00000358771 GIGYF1O75420 1035 aaPredicted RBP17.02■□□□□ 0.31
SIRPA-202ENST00000358771 ALDH1L1O75891 902 aa17.01■□□□□ 0.31
SIRPA-202ENST00000358771 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
SIRPA-202ENST00000358771 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
SIRPA-202ENST00000358771 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
SIRPA-202ENST00000358771 EVI5LQ96CN4 794 aa17.01■□□□□ 0.31
SIRPA-202ENST00000358771 LIMCH1Q9UPQ0 1083 aa17.01■□□□□ 0.31
SIRPA-202ENST00000358771 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
SIRPA-202ENST00000358771 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
SIRPA-202ENST00000358771 SUCLG2Q96I99 432 aa17■□□□□ 0.31
SIRPA-202ENST00000358771 GOLIM4O00461 696 aa17■□□□□ 0.31
SIRPA-202ENST00000358771 ADAMTS2O95450 1211 aa17■□□□□ 0.31
SIRPA-202ENST00000358771 TTC39AQ5SRH9 613 aa17■□□□□ 0.31
SIRPA-202ENST00000358771 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
SIRPA-202ENST00000358771 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
SIRPA-202ENST00000358771 KIF3AQ9Y496 699 aa16.99■□□□□ 0.31
SIRPA-202ENST00000358771 RALYLQ86SE5 291 aaKnown RBP16.99■□□□□ 0.31
SIRPA-202ENST00000358771 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
SIRPA-202ENST00000358771 NEURL4Q96JN8 1562 aa16.99■□□□□ 0.31
SIRPA-202ENST00000358771 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
SIRPA-202ENST00000358771 FAM43AQ8N2R8 423 aa16.99■□□□□ 0.31
SIRPA-202ENST00000358771 TRDNQ13061 729 aa16.98■□□□□ 0.31
SIRPA-202ENST00000358771 BEND3Q5T5X7 828 aa16.98■□□□□ 0.31
SIRPA-202ENST00000358771 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
SIRPA-202ENST00000358771 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
SIRPA-202ENST00000358771 RBM8AQ9Y5S9 174 aaKnown RBP16.98■□□□□ 0.31
SIRPA-202ENST00000358771 KLHL40Q2TBA0 621 aa16.97■□□□□ 0.31
SIRPA-202ENST00000358771 LRRFIP1Q32MZ4 808 aaKnown RBP16.97■□□□□ 0.31
SIRPA-202ENST00000358771 SIGLEC1Q9BZZ2 1709 aa16.97■□□□□ 0.31
SIRPA-202ENST00000358771 ESPNB1AK53 854 aa16.97■□□□□ 0.31
SIRPA-202ENST00000358771 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
SIRPA-202ENST00000358771 TSPY26PQ9H489 355 aa16.97■□□□□ 0.31
SIRPA-202ENST00000358771 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
SIRPA-202ENST00000358771 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.31
SIRPA-202ENST00000358771 AK2P54819 239 aa16.96■□□□□ 0.31
SIRPA-202ENST00000358771 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.31
SIRPA-202ENST00000358771 A1BGP04217 495 aa16.96■□□□□ 0.31
SIRPA-202ENST00000358771 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
SIRPA-202ENST00000358771 PTPRUQ92729 1446 aa16.96■□□□□ 0.31
SIRPA-202ENST00000358771 FAM227BQ96M60 508 aa16.96■□□□□ 0.31
SIRPA-202ENST00000358771 GJB2P29033 226 aa16.96■□□□□ 0.3
SIRPA-202ENST00000358771 DCAF5Q96JK2 942 aa16.96■□□□□ 0.3
SIRPA-202ENST00000358771 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.3
SIRPA-202ENST00000358771 TFIP11Q9UBB9 837 aaKnown RBP16.96■□□□□ 0.3
SIRPA-202ENST00000358771 COL3A1P02461 1466 aaPredicted RBP16.95■□□□□ 0.3
SIRPA-202ENST00000358771 MYO5BQ9ULV0 1848 aa16.95■□□□□ 0.3
SIRPA-202ENST00000358771 PDCP20941 246 aa16.95■□□□□ 0.3
SIRPA-202ENST00000358771 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
SIRPA-202ENST00000358771 IDH1O75874 414 aaKnown RBP16.95■□□□□ 0.3
SIRPA-202ENST00000358771 TFCP2Q12800 502 aa16.95■□□□□ 0.3
SIRPA-202ENST00000358771 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
SIRPA-202ENST00000358771 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
SIRPA-202ENST00000358771 STX6O43752 255 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 HOXB7P09629 217 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 TIMM10P62072 90 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 ZSCAN23Q3MJ62 389 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 METTL24Q5JXM2 366 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 AGLP35573 1532 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 STARD3NLO95772 234 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 HAND2P61296 217 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 GUCY1B3Q02153 619 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 CAMK4Q16566 473 aa16.94■□□□□ 0.3
SIRPA-202ENST00000358771 ANAPC15P60006 121 aa16.93■□□□□ 0.3
SIRPA-202ENST00000358771 CCDC173Q0VFZ6 552 aa16.93■□□□□ 0.3
SIRPA-202ENST00000358771 RRP12Q5JTH9 1297 aaKnown RBP16.93■□□□□ 0.3
SIRPA-202ENST00000358771 VPS37DQ86XT2 251 aa16.93■□□□□ 0.3
SIRPA-202ENST00000358771 IBTKQ9P2D0 1353 aaPredicted RBP16.93■□□□□ 0.3
SIRPA-202ENST00000358771 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
SIRPA-202ENST00000358771 KRT85P78386 507 aa16.93■□□□□ 0.3
SIRPA-202ENST00000358771 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
SIRPA-202ENST00000358771 SGSM2O43147 1006 aa16.93■□□□□ 0.3
SIRPA-202ENST00000358771 CCT2P78371 535 aaKnown RBP16.93■□□□□ 0.3
SIRPA-202ENST00000358771 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
SIRPA-202ENST00000358771 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
SIRPA-202ENST00000358771 BECN2A8MW95 431 aa16.92■□□□□ 0.3
SIRPA-202ENST00000358771 CNPY2Q9Y2B0 182 aa16.92■□□□□ 0.3
SIRPA-202ENST00000358771 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
SIRPA-202ENST00000358771 OVOS2A0A0J9YW53 1432 aa16.92■□□□□ 0.3
SIRPA-202ENST00000358771 OVOS2Q6IE36 1432 aa16.92■□□□□ 0.3
SIRPA-202ENST00000358771 ANKRD1Q15327 319 aa16.92■□□□□ 0.3
SIRPA-202ENST00000358771 EAF2Q96CJ1 260 aaPredicted RBP16.92■□□□□ 0.3
SIRPA-202ENST00000358771 RICTORQ6R327 1708 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
SIRPA-202ENST00000358771 IFIT5Q13325 482 aaKnown RBP16.91■□□□□ 0.3
SIRPA-202ENST00000358771 GCKRQ14397 625 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
SIRPA-202ENST00000358771 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms