RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 WASF1Q92558 559 aa17.15■□□□□ 0.34
SLC6A20-202ENST00000358525 MAP3K19Q56UN5 1328 aa17.15■□□□□ 0.34
SLC6A20-202ENST00000358525 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
SLC6A20-202ENST00000358525 ZNF213O14771 459 aa17.15■□□□□ 0.34
SLC6A20-202ENST00000358525 FAM177A1Q8N128 213 aaPredicted RBP17.14■□□□□ 0.34
SLC6A20-202ENST00000358525 NECAB1Q8N987 351 aa17.14■□□□□ 0.34
SLC6A20-202ENST00000358525 CAGE1Q8TC20 777 aa17.14■□□□□ 0.34
SLC6A20-202ENST00000358525 NAPBQ9H115 298 aa17.14■□□□□ 0.34
SLC6A20-202ENST00000358525 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.34
SLC6A20-202ENST00000358525 CBFA2T2O43439 604 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 PPFIA3O75145 1194 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 PPFIBP1Q86W92 1011 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 COPS6Q7L5N1 327 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 ZMYM3Q14202 1370 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 KSR2Q6VAB6 950 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 NEK1Q96PY6 1258 aa17.14■□□□□ 0.33
SLC6A20-202ENST00000358525 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 DDX46Q7L014 1031 aaKnown RBP17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 G2E3Q7L622 706 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 TCEANC2Q96MN5 208 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 ANKRD18BA2A2Z9 1011 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 GOLGA8BA8MQT2 603 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 GRM8O00222 908 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 OFD1O75665 1012 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 SMTNL1A8MU46 457 aa17.13■□□□□ 0.33
SLC6A20-202ENST00000358525 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 ANAPC15P60006 121 aa17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 HAND2P61296 217 aa17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 DHX8Q14562 1220 aaKnown RBP17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 ZSCAN22P10073 491 aaPredicted RBP17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 HOXC9P31274 260 aa17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 PHAXQ9H814 394 aaKnown RBP17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 SAMD9LQ8IVG5 1584 aa17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 EDC4Q6P2E9 1401 aaKnown RBP17.12■□□□□ 0.33
SLC6A20-202ENST00000358525 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 HSP90B2PQ58FF3 399 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 ABCA8O94911 1581 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 UBE2HP62256 183 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 RAB3GAP1Q15042 981 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 ANO10Q9NW15 660 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 ACBD3Q9H3P7 528 aa17.11■□□□□ 0.33
SLC6A20-202ENST00000358525 CFAP100Q494V2 611 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 SOGA3Q5TF21 947 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 LDHAL6AQ6ZMR3 332 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 RUFY1Q96T51 708 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 SLC5A1P13866 664 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 ATP10AO60312 1499 aa17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 DDX19AQ9NUU7 478 aaKnown RBP17.1■□□□□ 0.33
SLC6A20-202ENST00000358525 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 MYO5CQ9NQX4 1742 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 KRT18P05783 430 aaKnown RBP17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 FSIP1Q8NA03 581 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 STIM1Q13586 685 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 LRSAM1Q6UWE0 723 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 ADCY5O95622 1261 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 LRRC2Q9BYS8 371 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 ZNF652Q9Y2D9 606 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 CCAR1Q8IX12 1150 aaKnown RBP17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 TRPM2O94759 1503 aa17.09■□□□□ 0.33
SLC6A20-202ENST00000358525 KCNA6P17658 529 aa17.08■□□□□ 0.33
SLC6A20-202ENST00000358525 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.33
SLC6A20-202ENST00000358525 BRF1Q92994 677 aa17.08■□□□□ 0.33
SLC6A20-202ENST00000358525 USP48Q86UV5 1035 aa17.08■□□□□ 0.33
SLC6A20-202ENST00000358525 CLIP2Q9UDT6 1046 aa17.08■□□□□ 0.32
SLC6A20-202ENST00000358525 CEP131Q9UPN4 1083 aa17.08■□□□□ 0.32
SLC6A20-202ENST00000358525 GIMAP6Q6P9H5 292 aa17.08■□□□□ 0.32
SLC6A20-202ENST00000358525 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
SLC6A20-202ENST00000358525 GOLGA8AA7E2F4 631 aa17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 NMIQ13287 307 aaPredicted RBP17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 CHMLP26374 656 aa17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 LMBR1LQ6UX01 489 aa17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 ZNHIT6Q9NWK9 470 aaKnown RBP17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 AK7Q96M32 723 aa17.07■□□□□ 0.32
SLC6A20-202ENST00000358525 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 NFATC2IPQ8NCF5 419 aa17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 CTAGE5O15320 804 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms