RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 CCDC69A6NI79 296 aa19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 PDIA4P13667 645 aaKnown RBP19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 NBPF6Q5VWK0 638 aa19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 SNX21Q969T3 373 aa19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 NBPF4Q96M43 638 aa19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 ANKRD18BA2A2Z9 1011 aa19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 TRIM22Q8IYM9 498 aa19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 BAG4O95429 457 aaKnown RBP19.59■□□□□ 0.73
PPP1CB-202ENST00000358506 TSR1Q2NL82 804 aaKnown RBP19.58■□□□□ 0.73
PPP1CB-202ENST00000358506 LMBR1LQ6UX01 489 aa19.58■□□□□ 0.73
PPP1CB-202ENST00000358506 LDHAL6AQ6ZMR3 332 aa19.58■□□□□ 0.73
PPP1CB-202ENST00000358506 TMX3Q96JJ7 454 aa19.58■□□□□ 0.73
PPP1CB-202ENST00000358506 BABAM1Q9NWV8 329 aa19.58■□□□□ 0.73
PPP1CB-202ENST00000358506 NUP133Q8WUM0 1156 aa19.58■□□□□ 0.73
PPP1CB-202ENST00000358506 CFAP45Q9UL16 551 aa19.58■□□□□ 0.73
PPP1CB-202ENST00000358506 MPNDQ8N594 471 aa19.58■□□□□ 0.72
PPP1CB-202ENST00000358506 ZNF652Q9Y2D9 606 aa19.58■□□□□ 0.72
PPP1CB-202ENST00000358506 DCAF5Q96JK2 942 aa19.57■□□□□ 0.72
PPP1CB-202ENST00000358506 CCDC47Q96A33 483 aaKnown RBP19.57■□□□□ 0.72
PPP1CB-202ENST00000358506 OLFM4Q6UX06 510 aa19.56■□□□□ 0.72
PPP1CB-202ENST00000358506 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
PPP1CB-202ENST00000358506 JMYQ8N9B5 988 aa19.56■□□□□ 0.72
PPP1CB-202ENST00000358506 ANKRD20A12PQ8NF67 263 aa19.56■□□□□ 0.72
PPP1CB-202ENST00000358506 DDX21Q9NR30 783 aaKnown RBP eCLIP19.56■□□□□ 0.72
PPP1CB-202ENST00000358506 DDX46Q7L014 1031 aaKnown RBP19.56■□□□□ 0.72
PPP1CB-202ENST00000358506 FAM135BQ49AJ0 1406 aa19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 GDPD2Q9HCC8 539 aa19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 ARHGEF10O15013 1369 aa19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 MAP3K4Q9Y6R4 1608 aa19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 NUP62CLQ9H1M0 184 aa19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 HSP90AA2PQ14568 343 aaPredicted RBP19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 USP19O94966 1318 aa19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 ROBO2Q9HCK4 1378 aa19.55■□□□□ 0.72
PPP1CB-202ENST00000358506 CDKL5O76039 1030 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 UBAC1Q9BSL1 405 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 ARHGAP31Q2M1Z3 1444 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 AATKQ6ZMQ8 1374 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 IL2RBP14784 551 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 ANAPC15P60006 121 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 HOMER1Q86YM7 354 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 R3HCC1Q9Y3T6 440 aaKnown RBP19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 PRR36Q9H6K5 1346 aa19.54■□□□□ 0.72
PPP1CB-202ENST00000358506 HMGB1P09429 215 aaKnown RBP19.53■□□□□ 0.72
PPP1CB-202ENST00000358506 SPC24Q8NBT2 197 aa19.53■□□□□ 0.72
PPP1CB-202ENST00000358506 TPM2P07951 284 aa19.53■□□□□ 0.72
PPP1CB-202ENST00000358506 PLEKHG1Q9ULL1 1385 aa19.53■□□□□ 0.72
PPP1CB-202ENST00000358506 KIAA0232Q92628 1395 aa19.53■□□□□ 0.72
PPP1CB-202ENST00000358506 HOXB7P09629 217 aa19.53■□□□□ 0.72
PPP1CB-202ENST00000358506 ATP7BP35670 1465 aa19.53■□□□□ 0.72
PPP1CB-202ENST00000358506 TSPOAP1O95153 1857 aa19.52■□□□□ 0.72
PPP1CB-202ENST00000358506 ZNF790Q6PG37 636 aa19.52■□□□□ 0.72
PPP1CB-202ENST00000358506 GJB2P29033 226 aa19.52■□□□□ 0.72
PPP1CB-202ENST00000358506 NGLY1Q96IV0 654 aa19.52■□□□□ 0.72
PPP1CB-202ENST00000358506 ABCC4O15439 1325 aa19.52■□□□□ 0.71
PPP1CB-202ENST00000358506 STX6O43752 255 aa19.52■□□□□ 0.71
PPP1CB-202ENST00000358506 CHMLP26374 656 aa19.52■□□□□ 0.71
PPP1CB-202ENST00000358506 IL17REQ8NFR9 667 aa19.52■□□□□ 0.71
PPP1CB-202ENST00000358506 USP26Q9BXU7 913 aa19.52■□□□□ 0.71
PPP1CB-202ENST00000358506 NAPBQ9H115 298 aa19.52■□□□□ 0.71
PPP1CB-202ENST00000358506 MAP3K12Q12852 859 aa19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 RNF17Q9BXT8 1623 aaKnown RBP19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 ZNF213O14771 459 aa19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 SLC5A1P13866 664 aa19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 RBM8AQ9Y5S9 174 aaKnown RBP19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 TTC41PQ6P2S7 1318 aa19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 PCMTD1Q96MG8 357 aaPredicted RBP19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 CCAR2Q8N163 923 aaKnown RBP19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 TCEANC2Q96MN5 208 aa19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 NEK1Q96PY6 1258 aa19.51■□□□□ 0.71
PPP1CB-202ENST00000358506 SCAND2PQ9GZW5 306 aaPredicted RBP19.5■□□□□ 0.71
PPP1CB-202ENST00000358506 FAM13BQ9NYF5 915 aa19.5■□□□□ 0.71
PPP1CB-202ENST00000358506 PNMA6EA0A0J9YXQ4 647 aa19.5■□□□□ 0.71
PPP1CB-202ENST00000358506 ESPNB1AK53 854 aa19.5■□□□□ 0.71
PPP1CB-202ENST00000358506 CCT2P78371 535 aaKnown RBP19.5■□□□□ 0.71
PPP1CB-202ENST00000358506 DDX17Q92841 729 aaKnown RBP19.5■□□□□ 0.71
PPP1CB-202ENST00000358506 ZPR1O75312 459 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 SMC2O95347 1197 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 GUCY1B3Q02153 619 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 MINDY4BA8MYZ0 360 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 RBM25P49756 843 aaKnown RBP19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 CAVIN4Q5BKX8 364 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 SPHKAPQ2M3C7 1700 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 CAMK4Q16566 473 aa19.49■□□□□ 0.71
PPP1CB-202ENST00000358506 EIF4A1P60842 406 aaKnown RBP19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 MAP3K11Q16584 847 aa19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 IL15P40933 162 aaPredicted RBP19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 HAND2P61296 217 aa19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 NECAB1Q8N987 351 aa19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
PPP1CB-202ENST00000358506 HMGN5P82970 282 aaKnown RBP19.47■□□□□ 0.71
PPP1CB-202ENST00000358506 KLHL40Q2TBA0 621 aa19.47■□□□□ 0.71
PPP1CB-202ENST00000358506 TFIP11Q9UBB9 837 aaKnown RBP19.47■□□□□ 0.71
PPP1CB-202ENST00000358506 CLASP1Q7Z460 1538 aa19.47■□□□□ 0.71
PPP1CB-202ENST00000358506 NMIQ13287 307 aaPredicted RBP19.47■□□□□ 0.71
PPP1CB-202ENST00000358506 CCDC183Q5T5S1 534 aa19.47■□□□□ 0.71
PPP1CB-202ENST00000358506 IPO7O95373 1038 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms