RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 NAP1L3Q99457 506 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-202ENST00000358392 TMOD2Q9NZR1 351 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 ZNF213O14771 459 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
COL11A1-202ENST00000358392 OTUD6BQ8N6M0 293 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-202ENST00000358392 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-202ENST00000358392 MICALL1Q8N3F8 863 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-202ENST00000358392 MCM10Q7L590 875 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 SELENOSQ9BQE4 189 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-202ENST00000358392 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL11A1-202ENST00000358392 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-202ENST00000358392 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 PNISRQ8TF01 805 aaKnown RBP12.86□□□□□ -0.35
COL11A1-202ENST00000358392 CAVIN4Q5BKX8 364 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 CEP57Q86XR8 500 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 CFAP58Q5T655 872 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 KIF4AO95239 1232 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 PTGS1P23219 599 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
COL11A1-202ENST00000358392 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
COL11A1-202ENST00000358392 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 KIAA0753Q2KHM9 967 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 GIMAP6Q6P9H5 292 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 ATRIPQ8WXE1 791 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 CALML4Q96GE6 196 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 CCDC184Q52MB2 194 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 DNAJC21Q5F1R6 531 aaKnown RBP12.85□□□□□ -0.35
COL11A1-202ENST00000358392 CCDC155Q8N6L0 562 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 BICD1Q96G01 975 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 CLGNO14967 610 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 PIP4K2BP78356 416 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
COL11A1-202ENST00000358392 RAB3IL1Q8TBN0 382 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 SSX2IPQ9Y2D8 614 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 FAM69CQ0P6D2 419 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 PTPRGP23470 1445 aa12.85□□□□□ -0.35
COL11A1-202ENST00000358392 GSDMDP57764 484 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 HAND2P61296 217 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 KRT13P13646 458 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
COL11A1-202ENST00000358392 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 CTAGE5O15320 804 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 SYNCQ9H7C4 482 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 AFMP43652 599 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 F6X3S4 739 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
COL11A1-202ENST00000358392 IQCGQ9H095 443 aaKnown RBP12.84□□□□□ -0.35
COL11A1-202ENST00000358392 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 FAM160A1Q05DH4 1040 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 A0A087WZG4 1122 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
COL11A1-202ENST00000358392 CKAP4Q07065 602 aaKnown RBP12.83□□□□□ -0.36
COL11A1-202ENST00000358392 DPH6Q7L8W6 267 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 CCDC196A0A1B0GTZ2 297 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 ARID5AQ03989 594 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 CETN1Q12798 172 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 BBXQ8WY36 941 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-202ENST00000358392 TPD52P55327 224 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-202ENST00000358392 DUSP27Q5VZP5 1158 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 AKAP2Q9Y2D5 859 aa12.83□□□□□ -0.36
COL11A1-202ENST00000358392 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 IGSF3O75054 1194 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 ZSCAN23Q3MJ62 389 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 GSTA5Q7RTV2 222 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 FEZ1Q99689 392 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 TBC1D2Q9BYX2 928 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 GLRX3O76003 335 aaKnown RBP12.82□□□□□ -0.36
COL11A1-202ENST00000358392 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 FYCO1Q9BQS8 1478 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 SLC26A6Q9BXS9 759 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 ARHGAP5Q13017 1502 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 ACTN2P35609 894 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 LIMCH1Q9UPQ0 1083 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 KIF20AO95235 890 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
COL11A1-202ENST00000358392 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-202ENST00000358392 UBASH3AP57075 661 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
COL11A1-202ENST00000358392 MYOM3Q5VTT5 1437 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-202ENST00000358392 ZNF165P49910 485 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 NAA25Q14CX7 972 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 NSRP1Q9H0G5 558 aaKnown RBP12.81□□□□□ -0.36
COL11A1-202ENST00000358392 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 TMEM67Q5HYA8 995 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 TCP11L1Q9NUJ3 509 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms