RNA–Protein interactions for RNA: ENST00000358337.9

WDR55-201, Transcript of WD repeat domain 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR55, Length 4,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR55-201ENST00000358337 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
WDR55-201ENST00000358337 PREX1Q8TCU6 1659 aa12.1□□□□□ -0.47
WDR55-201ENST00000358337 XRCC6P12956 609 aaKnown RBP eCLIP12.1□□□□□ -0.47
WDR55-201ENST00000358337 ZNF790Q6PG37 636 aa12.1□□□□□ -0.47
WDR55-201ENST00000358337 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
WDR55-201ENST00000358337 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
WDR55-201ENST00000358337 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
WDR55-201ENST00000358337 ESPNB1AK53 854 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 SDSP20132 328 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 VPS72Q15906 364 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 HOMEZQ8IX15 550 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
WDR55-201ENST00000358337 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 MAP3K5Q99683 1374 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 PHKG2P15735 406 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
WDR55-201ENST00000358337 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
WDR55-201ENST00000358337 IGHMBP2P38935 993 aaKnown RBP12.08□□□□□ -0.48
WDR55-201ENST00000358337 ST5P78524 1137 aa12.08□□□□□ -0.48
WDR55-201ENST00000358337 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
WDR55-201ENST00000358337 TTC22Q5TAA0 569 aa12.08□□□□□ -0.48
WDR55-201ENST00000358337 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
WDR55-201ENST00000358337 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
WDR55-201ENST00000358337 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
WDR55-201ENST00000358337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.484e-6■■■■■ 27.4
WDR55-201ENST00000358337 ATP7BP35670 1465 aa12.08□□□□□ -0.48
WDR55-201ENST00000358337 R3HCC1Q9Y3T6 440 aaKnown RBP12.08□□□□□ -0.48
WDR55-201ENST00000358337 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
WDR55-201ENST00000358337 DCTPP1Q9H773 170 aa12.07□□□□□ -0.48
WDR55-201ENST00000358337 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
WDR55-201ENST00000358337 CPS1P31327 1500 aa12.07□□□□□ -0.48
WDR55-201ENST00000358337 SF3A1Q15459 793 aaKnown RBP12.07□□□□□ -0.48
WDR55-201ENST00000358337 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
WDR55-201ENST00000358337 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 KCNQ4P56696 695 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 SIK1P57059 783 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 FIBPO43427 364 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 PDE1AP54750 535 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 STK3Q13188 491 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 DDX46Q7L014 1031 aaKnown RBP12.06□□□□□ -0.48
WDR55-201ENST00000358337 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 GLRX3O76003 335 aaKnown RBP12.06□□□□□ -0.48
WDR55-201ENST00000358337 FKBP4Q02790 459 aaKnown RBP eCLIP12.06□□□□□ -0.48
WDR55-201ENST00000358337 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
WDR55-201ENST00000358337 LRRFIP1Q32MZ4 808 aaKnown RBP12.06□□□□□ -0.48
WDR55-201ENST00000358337 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
WDR55-201ENST00000358337 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
WDR55-201ENST00000358337 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 MCM2P49736 904 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
WDR55-201ENST00000358337 KIF3AQ9Y496 699 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 RAB11FIP3O75154 756 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 A1BGP04217 495 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 PLEKHM2Q8IWE5 1019 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 ASAP1Q9ULH1 1129 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 CPLX1O14810 134 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 KDM4AO75164 1064 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
WDR55-201ENST00000358337 GDPD2Q9HCC8 539 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
WDR55-201ENST00000358337 PA2G4Q9UQ80 394 aaKnown RBP12.05□□□□□ -0.48
WDR55-201ENST00000358337 SLIT1O75093 1534 aa12.04□□□□□ -0.48
WDR55-201ENST00000358337 MSL1Q68DK7 614 aa12.04□□□□□ -0.48
WDR55-201ENST00000358337 DCCP43146 1447 aa12.04□□□□□ -0.48
WDR55-201ENST00000358337 SYCE3A1L190 88 aa12.04□□□□□ -0.48
WDR55-201ENST00000358337 CYP46A1Q9Y6A2 500 aa12.04□□□□□ -0.48
WDR55-201ENST00000358337 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
WDR55-201ENST00000358337 TRDNQ13061 729 aa12.04□□□□□ -0.48
WDR55-201ENST00000358337 IL17REQ8NFR9 667 aa12.04□□□□□ -0.48
WDR55-201ENST00000358337 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.04□□□□□ -0.48
WDR55-201ENST00000358337 PSMA5P28066 241 aa12.03□□□□□ -0.48
WDR55-201ENST00000358337 ATP8B2P98198 1209 aa12.03□□□□□ -0.48
WDR55-201ENST00000358337 GPR162Q16538 588 aa12.03□□□□□ -0.48
WDR55-201ENST00000358337 GNL3LQ9NVN8 582 aaKnown RBP12.03□□□□□ -0.48
WDR55-201ENST00000358337 TULP4Q9NRJ4 1543 aa12.03□□□□□ -0.48
WDR55-201ENST00000358337 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
WDR55-201ENST00000358337 CWC22Q9HCG8 908 aaKnown RBP12.03□□□□□ -0.48
WDR55-201ENST00000358337 CWC25Q9NXE8 425 aaPredicted RBP12.03□□□□□ -0.48
WDR55-201ENST00000358337 BAG4O95429 457 aaKnown RBP12.03□□□□□ -0.48
WDR55-201ENST00000358337 IFIT5Q13325 482 aaKnown RBP12.03□□□□□ -0.48
WDR55-201ENST00000358337 CASTP20810 708 aaKnown RBP12.02□□□□□ -0.48
WDR55-201ENST00000358337 BICD2Q8TD16 824 aa12.02□□□□□ -0.48
WDR55-201ENST00000358337 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.48
WDR55-201ENST00000358337 MST1RQ04912 1400 aa12.02□□□□□ -0.48
WDR55-201ENST00000358337 KCNQ3O43525 872 aa12.02□□□□□ -0.49
WDR55-201ENST00000358337 RALYLQ86SE5 291 aaKnown RBP12.02□□□□□ -0.49
WDR55-201ENST00000358337 HIP1O00291 1037 aa12.02□□□□□ -0.49
WDR55-201ENST00000358337 PKNOX2Q96KN3 472 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms