RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 CCDC73Q6ZRK6 1079 aa18.68■□□□□ 0.58
EPHB4-201ENST00000358173 NBPF7P0C2Y1 421 aaPredicted RBP18.68■□□□□ 0.58
EPHB4-201ENST00000358173 ZNF496Q96IT1 587 aaPredicted RBP18.68■□□□□ 0.58
EPHB4-201ENST00000358173 ALDH1L1O75891 902 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 KLHL40Q2TBA0 621 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
EPHB4-201ENST00000358173 FERMT3Q86UX7 667 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 DDX21Q9NR30 783 aaKnown RBP eCLIP18.67■□□□□ 0.58
EPHB4-201ENST00000358173 LRP2BPQ9P2M1 347 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 PDCP20941 246 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 DDB1Q16531 1140 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 RBM27Q9P2N5 1060 aaKnown RBP18.67■□□□□ 0.58
EPHB4-201ENST00000358173 PPRC1Q5VV67 1664 aaKnown RBP18.67■□□□□ 0.58
EPHB4-201ENST00000358173 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
EPHB4-201ENST00000358173 CCDC83Q8IWF9 413 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 ATP7BP35670 1465 aa18.67■□□□□ 0.58
EPHB4-201ENST00000358173 LETM1O95202 739 aaPredicted RBP18.66■□□□□ 0.58
EPHB4-201ENST00000358173 KLHDC4Q8TBB5 520 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 DDX11Q96FC9 970 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 UQCRHLA0A096LP55 91 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 UQCRHP07919 91 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 MAP7D2Q96T17 732 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 SNX21Q969T3 373 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 GNL3LQ9NVN8 582 aaKnown RBP18.66■□□□□ 0.58
EPHB4-201ENST00000358173 AATKQ6ZMQ8 1374 aa18.66■□□□□ 0.58
EPHB4-201ENST00000358173 RRP9O43818 475 aaKnown RBP18.65■□□□□ 0.58
EPHB4-201ENST00000358173 TOM1O60784 492 aa18.65■□□□□ 0.58
EPHB4-201ENST00000358173 RAI14Q9P0K7 980 aa18.65■□□□□ 0.58
EPHB4-201ENST00000358173 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
EPHB4-201ENST00000358173 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
EPHB4-201ENST00000358173 ADGRB3O60242 1522 aa18.65■□□□□ 0.58
EPHB4-201ENST00000358173 GLI2P10070 1586 aa18.65■□□□□ 0.58
EPHB4-201ENST00000358173 TEX13AQ9BXU3 409 aaPredicted RBP18.65■□□□□ 0.58
EPHB4-201ENST00000358173 ARHGEF10O15013 1369 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 MARCH6O60337 910 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 A1BGP04217 495 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 VPS53Q5VIR6 699 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 CCDC34Q96HJ3 373 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 INO80Q9ULG1 1556 aaPredicted RBP18.64■□□□□ 0.57
EPHB4-201ENST00000358173 ZPR1O75312 459 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 TCEANC2Q96MN5 208 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 AKAP2Q9Y2D5 859 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 PPFIA3O75145 1194 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 SAMD1Q6SPF0 538 aaPredicted RBP18.64■□□□□ 0.57
EPHB4-201ENST00000358173 SDF4Q9BRK5 362 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 DIP2CQ9Y2E4 1556 aa18.64■□□□□ 0.57
EPHB4-201ENST00000358173 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 ALKQ9UM73 1620 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 CLCN1P35523 988 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 EVI5LQ96CN4 794 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 BICC1Q9H694 974 aaKnown RBP18.63■□□□□ 0.57
EPHB4-201ENST00000358173 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 KIDINS220Q9ULH0 1771 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 KRT85P78386 507 aa18.63■□□□□ 0.57
EPHB4-201ENST00000358173 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
EPHB4-201ENST00000358173 CCDC192P0DO97 292 aa18.62■□□□□ 0.57
EPHB4-201ENST00000358173 SLC52A2Q9HAB3 445 aa18.62■□□□□ 0.57
EPHB4-201ENST00000358173 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
EPHB4-201ENST00000358173 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
EPHB4-201ENST00000358173 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
EPHB4-201ENST00000358173 TDO2P48775 406 aa18.62■□□□□ 0.57
EPHB4-201ENST00000358173 HMGN5P82970 282 aaKnown RBP18.62■□□□□ 0.57
EPHB4-201ENST00000358173 SART3Q15020 963 aaKnown RBP18.62■□□□□ 0.57
EPHB4-201ENST00000358173 AIDAQ96BJ3 306 aa18.62■□□□□ 0.57
EPHB4-201ENST00000358173 SOS1Q07889 1333 aaPredicted RBP18.61■□□□□ 0.57
EPHB4-201ENST00000358173 ANKRD1Q15327 319 aa18.61■□□□□ 0.57
EPHB4-201ENST00000358173 SAFBQ15424 915 aaKnown RBP eCLIP18.61■□□□□ 0.57
EPHB4-201ENST00000358173 RAB3GAP1Q15042 981 aa18.61■□□□□ 0.57
EPHB4-201ENST00000358173 MTERF4Q7Z6M4 381 aaKnown RBP18.61■□□□□ 0.57
EPHB4-201ENST00000358173 HOMER1Q86YM7 354 aa18.61■□□□□ 0.57
EPHB4-201ENST00000358173 CCAR2Q8N163 923 aaKnown RBP18.61■□□□□ 0.57
EPHB4-201ENST00000358173 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
EPHB4-201ENST00000358173 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 USP16Q9Y5T5 823 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 PCDH11XQ9BZA7 1347 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 PCDH11YQ9BZA8 1340 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 ZSCAN23Q3MJ62 389 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 ESYT1Q9BSJ8 1104 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 NACAP1Q9BZK3 213 aa18.6■□□□□ 0.57
EPHB4-201ENST00000358173 RRAGDQ9NQL2 400 aaPredicted RBP18.6■□□□□ 0.57
EPHB4-201ENST00000358173 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 HAND2P61296 217 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 ZSCAN25Q6NSZ9 544 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 TNMDQ9H2S6 317 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 IQSEC3Q9UPP2 1182 aaPredicted RBP18.59■□□□□ 0.57
EPHB4-201ENST00000358173 RIMBP3CA6NJZ7 1639 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 RIMBP3BA6NNM3 1639 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 RIMBP3Q9UFD9 1639 aa18.59■□□□□ 0.57
EPHB4-201ENST00000358173 PPP1R1BQ9UD71 204 aaPredicted RBP18.59■□□□□ 0.57
EPHB4-201ENST00000358173 ZNF771Q7L3S4 317 aaPredicted RBP18.58■□□□□ 0.57
EPHB4-201ENST00000358173 FAM89AQ96GI7 184 aa18.58■□□□□ 0.57
EPHB4-201ENST00000358173 LMTK2Q8IWU2 1503 aa18.58■□□□□ 0.57
EPHB4-201ENST00000358173 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.57
EPHB4-201ENST00000358173 GIGYF1O75420 1035 aaPredicted RBP18.58■□□□□ 0.57
EPHB4-201ENST00000358173 KRT32Q14532 448 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms