RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NARFQ9UHQ1 456 aa18.99■□□□□ 0.63
CCNE1-202ENST00000357943 SRCAPQ6ZRS2 3230 aa18.99■□□□□ 0.63
CCNE1-202ENST00000357943 MAP3K15Q6ZN16 1313 aa18.98■□□□□ 0.63
CCNE1-202ENST00000357943 USP42Q9H9J4 1324 aaKnown RBP18.98■□□□□ 0.63
CCNE1-202ENST00000357943 PSDA5PKW4 1024 aaPredicted RBP18.98■□□□□ 0.63
CCNE1-202ENST00000357943 USPL1Q5W0Q7 1092 aa18.98■□□□□ 0.63
CCNE1-202ENST00000357943 FRAT1Q92837 279 aaPredicted RBP18.98■□□□□ 0.63
CCNE1-202ENST00000357943 KIF16BQ96L93 1317 aa18.97■□□□□ 0.63
CCNE1-202ENST00000357943 PI4KAP2A4QPH2 592 aa18.97■□□□□ 0.63
CCNE1-202ENST00000357943 ZPR1O75312 459 aa18.97■□□□□ 0.63
CCNE1-202ENST00000357943 HLFQ16534 295 aa18.97■□□□□ 0.63
CCNE1-202ENST00000357943 PI4KAP1Q8N8J0 262 aa18.97■□□□□ 0.63
CCNE1-202ENST00000357943 C4AP0C0L4 1744 aa18.97■□□□□ 0.63
CCNE1-202ENST00000357943 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
CCNE1-202ENST00000357943 PLBD2Q8NHP8 589 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 BCL2L12Q9HB09 334 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 ADCY9O60503 1353 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 CACNA1FO60840 1977 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 PTPRCP08575 1304 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 F6X3S4 739 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 KSR2Q6VAB6 950 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 RIC3Q7Z5B4 369 aa18.96■□□□□ 0.63
CCNE1-202ENST00000357943 ERVV-1B6SEH8 477 aa18.95■□□□□ 0.62
CCNE1-202ENST00000357943 GYS1P13807 737 aa18.95■□□□□ 0.62
CCNE1-202ENST00000357943 MAP3K2Q9Y2U5 619 aa18.95■□□□□ 0.62
CCNE1-202ENST00000357943 QSER1Q2KHR3 1735 aa18.95■□□□□ 0.62
CCNE1-202ENST00000357943 TNNQ9UQP3 1299 aa18.94■□□□□ 0.62
CCNE1-202ENST00000357943 PLIN1O60240 522 aa18.93■□□□□ 0.62
CCNE1-202ENST00000357943 FKBP8Q14318 412 aa18.93■□□□□ 0.62
CCNE1-202ENST00000357943 GIGYF2Q6Y7W6 1299 aaKnown RBP18.93■□□□□ 0.62
CCNE1-202ENST00000357943 TRIM27P14373 513 aa18.92■□□□□ 0.62
CCNE1-202ENST00000357943 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
CCNE1-202ENST00000357943 ARHGAP45Q92619 1136 aa18.92■□□□□ 0.62
CCNE1-202ENST00000357943 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
CCNE1-202ENST00000357943 ZKSCAN2Q63HK3 967 aa18.92■□□□□ 0.62
CCNE1-202ENST00000357943 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
CCNE1-202ENST00000357943 DNAAF4Q8WXU2 420 aa18.92■□□□□ 0.62
CCNE1-202ENST00000357943 SCN7AQ01118 1682 aa18.91■□□□□ 0.62
CCNE1-202ENST00000357943 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
CCNE1-202ENST00000357943 MYD88Q99836 296 aa18.91■□□□□ 0.62
CCNE1-202ENST00000357943 METTL22Q9BUU2 404 aaPredicted RBP18.91■□□□□ 0.62
CCNE1-202ENST00000357943 ZNF652Q9Y2D9 606 aa18.91■□□□□ 0.62
CCNE1-202ENST00000357943 BCORQ6W2J9 1755 aa18.91■□□□□ 0.62
CCNE1-202ENST00000357943 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
CCNE1-202ENST00000357943 TBC1D9BQ66K14 1250 aa18.9■□□□□ 0.62
CCNE1-202ENST00000357943 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
CCNE1-202ENST00000357943 CLUAP1Q96AJ1 413 aa18.9■□□□□ 0.62
CCNE1-202ENST00000357943 API5Q9BZZ5 524 aaKnown RBP18.9■□□□□ 0.62
CCNE1-202ENST00000357943 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.62
CCNE1-202ENST00000357943 RGL2O15211 777 aa18.89■□□□□ 0.62
CCNE1-202ENST00000357943 ZBTB7AO95365 584 aa18.89■□□□□ 0.62
CCNE1-202ENST00000357943 BICDL1Q6ZP65 573 aa18.89■□□□□ 0.62
CCNE1-202ENST00000357943 SLC16A10Q8TF71 515 aa18.89■□□□□ 0.62
CCNE1-202ENST00000357943 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.62
CCNE1-202ENST00000357943 ARFGEF2Q9Y6D5 1785 aa18.89■□□□□ 0.61
CCNE1-202ENST00000357943 CASZ1Q86V15 1759 aa18.89■□□□□ 0.61
CCNE1-202ENST00000357943 IGKV5-2P06315 115 aa18.89■□□□□ 0.61
CCNE1-202ENST00000357943 GPTP24298 496 aa18.89■□□□□ 0.61
CCNE1-202ENST00000357943 RRP1P56182 461 aaKnown RBP18.89■□□□□ 0.61
CCNE1-202ENST00000357943 HSP90AB3PQ58FF7 597 aa18.89■□□□□ 0.61
CCNE1-202ENST00000357943 ZNF34Q8IZ26 560 aa18.88■□□□□ 0.61
CCNE1-202ENST00000357943 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
CCNE1-202ENST00000357943 NIP7Q9Y221 180 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCNE1-202ENST00000357943 ATP10DQ9P241 1426 aa18.88■□□□□ 0.61
CCNE1-202ENST00000357943 UBN2Q6ZU65 1347 aa18.88■□□□□ 0.61
CCNE1-202ENST00000357943 NFIXQ14938 502 aa18.87■□□□□ 0.61
CCNE1-202ENST00000357943 CWF19L2Q2TBE0 894 aaKnown RBP18.87■□□□□ 0.61
CCNE1-202ENST00000357943 BEND3Q5T5X7 828 aa18.87■□□□□ 0.61
CCNE1-202ENST00000357943 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.87■□□□□ 0.61
CCNE1-202ENST00000357943 ISCA1Q9BUE6 129 aa18.87■□□□□ 0.61
CCNE1-202ENST00000357943 ABCC4O15439 1325 aa18.87■□□□□ 0.61
CCNE1-202ENST00000357943 NUP98P52948 1817 aa18.87■□□□□ 0.61
CCNE1-202ENST00000357943 RLBP1P12271 317 aa18.86■□□□□ 0.61
CCNE1-202ENST00000357943 TM4SF1P30408 202 aa18.86■□□□□ 0.61
CCNE1-202ENST00000357943 NEXNQ0ZGT2 675 aa18.86■□□□□ 0.61
CCNE1-202ENST00000357943 C20orf194Q5TEA3 1177 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
CCNE1-202ENST00000357943 DZIP1LQ8IYY4 767 aaKnown RBP18.85■□□□□ 0.61
CCNE1-202ENST00000357943 SETDB2Q96T68 719 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 MTFR1LQ9H019 292 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
CCNE1-202ENST00000357943 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 NEURL1BA8MQ27 555 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 NLRP10Q86W26 655 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 LINS1Q8NG48 757 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 PANK1Q8TE04 598 aa18.85■□□□□ 0.61
CCNE1-202ENST00000357943 FAM177BA6PVY3 158 aa18.84■□□□□ 0.61
CCNE1-202ENST00000357943 MMP10P09238 476 aa18.84■□□□□ 0.61
CCNE1-202ENST00000357943 DDR1Q08345 913 aa18.84■□□□□ 0.61
CCNE1-202ENST00000357943 TRIM28Q13263 835 aaKnown RBP18.84■□□□□ 0.61
CCNE1-202ENST00000357943 TMEM57Q8N5G2 664 aa18.84■□□□□ 0.61
CCNE1-202ENST00000357943 SRCIN1Q9C0H9 1055 aa18.84■□□□□ 0.61
CCNE1-202ENST00000357943 PXDNLA1KZ92 1463 aa18.83■□□□□ 0.61
CCNE1-202ENST00000357943 POLRMTO00411 1230 aaKnown RBP18.83■□□□□ 0.61
CCNE1-202ENST00000357943 SUSD4Q5VX71 490 aa18.83■□□□□ 0.61
CCNE1-202ENST00000357943 PARP10Q53GL7 1025 aa18.82■□□□□ 0.6
CCNE1-202ENST00000357943 INTS3Q68E01 1043 aaKnown RBP18.82■□□□□ 0.6
CCNE1-202ENST00000357943 CCDC191Q8NCU4 936 aa18.82■□□□□ 0.6
CCNE1-202ENST00000357943 CARMIL3Q8ND23 1372 aa18.82■□□□□ 0.6
CCNE1-202ENST00000357943 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms