RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CTNNBL1Q8WYA6 563 aaPredicted RBP14.77□□□□□ -0.05
SMC4-202ENST00000357388 RASSF4Q9H2L5 321 aa14.77□□□□□ -0.05
SMC4-202ENST00000357388 NAP1L3Q99457 506 aaPredicted RBP14.76□□□□□ -0.05
SMC4-202ENST00000357388 ANKRD30BQ9BXX2 1392 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 SSFA2P28290 1259 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 NOLC1Q14978 699 aaKnown RBP eCLIP14.76□□□□□ -0.054e-16■■■■■ 30.2
SMC4-202ENST00000357388 GRIPAP1Q4V328 841 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 CUL5Q93034 780 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 SLU7O95391 586 aaKnown RBP14.76□□□□□ -0.05
SMC4-202ENST00000357388 RBM25P49756 843 aaKnown RBP14.76□□□□□ -0.05
SMC4-202ENST00000357388 AMPD3Q01432 767 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 TMEM266Q2M3C6 531 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 METTL24Q5JXM2 366 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 GBP6Q6ZN66 633 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 KIF1BPQ96EK5 621 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 CCDC77Q9BR77 488 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 RASAL2Q9UJF2 1139 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 A0A1B0GUL7 405 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 OTUD6BQ8N6M0 293 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 FERMT1Q9BQL6 677 aa14.76□□□□□ -0.05
SMC4-202ENST00000357388 ZNF644Q9H582 1327 aaPredicted RBP14.75□□□□□ -0.05
SMC4-202ENST00000357388 CCDC172P0C7W6 258 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 PPM1FP49593 454 aaPredicted RBP14.75□□□□□ -0.05
SMC4-202ENST00000357388 KLHL10Q6JEL2 608 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 CTAGE1Q96RT6 745 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 OGFRQ9NZT2 677 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 ABCF2Q9UG63 623 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 IKBKGQ9Y6K9 419 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 CLGNO14967 610 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 ZNF165P49910 485 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 FSIP1Q8NA03 581 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 MX1P20591 662 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 CTNNA2P26232 953 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 TBC1D2Q9BYX2 928 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 TMOD3Q9NYL9 352 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 TMCO5BA8MYB1 307 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 SMC6Q96SB8 1091 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 LRRC27Q9C0I9 530 aa14.75□□□□□ -0.05
SMC4-202ENST00000357388 PRPHP41219 470 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 TTLL12Q14166 644 aaPredicted RBP14.74□□□□□ -0.05
SMC4-202ENST00000357388 KIAA0753Q2KHM9 967 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 CCDC129Q6ZRS4 1044 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 GOLGA1Q92805 767 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 MAP4K4O95819 1239 aaPredicted RBP14.74□□□□□ -0.05
SMC4-202ENST00000357388 CAPN2P17655 700 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 FERMT3Q86UX7 667 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.74□□□□□ -0.057e-7■■□□□ 12.7
SMC4-202ENST00000357388 JADE2Q9NQC1 790 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 CYLC1P35663 651 aaPredicted RBP14.74□□□□□ -0.05
SMC4-202ENST00000357388 MTIF2P46199 727 aaKnown RBP14.74□□□□□ -0.05
SMC4-202ENST00000357388 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
SMC4-202ENST00000357388 PRDM2Q13029 1718 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 ZFYP08048 801 aaPredicted RBP14.74□□□□□ -0.05
SMC4-202ENST00000357388 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
SMC4-202ENST00000357388 A0A1W2PRG0 241 aa14.73□□□□□ -0.05
SMC4-202ENST00000357388 PAXIP1Q6ZW49 1069 aaPredicted RBP14.73□□□□□ -0.05
SMC4-202ENST00000357388 PPP1R14CQ8TAE6 165 aa14.73□□□□□ -0.05
SMC4-202ENST00000357388 HYPKQ9NX55 129 aa14.73□□□□□ -0.05
SMC4-202ENST00000357388 RBM28Q9NW13 759 aaKnown RBP14.73□□□□□ -0.05
SMC4-202ENST00000357388 ZKSCAN5Q9Y2L8 839 aa14.73□□□□□ -0.05
SMC4-202ENST00000357388 BAG4O95429 457 aaKnown RBP14.73□□□□□ -0.05
SMC4-202ENST00000357388 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
SMC4-202ENST00000357388 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
SMC4-202ENST00000357388 DZIP1Q86YF9 867 aaKnown RBP14.73□□□□□ -0.05
SMC4-202ENST00000357388 A6NNZ2 444 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 KIF3CO14782 793 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 ZSCAN23Q3MJ62 389 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 TUBB8Q3ZCM7 444 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 SWAP70Q9UH65 585 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 CCDC160A6NGH7 325 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 SLFN5Q08AF3 891 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 ALDH1L2Q3SY69 923 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 CTCFLQ8NI51 663 aaPredicted RBP14.72□□□□□ -0.05
SMC4-202ENST00000357388 ATRIPQ8WXE1 791 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 GNAT3A8MTJ3 354 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 SPAG1Q07617 926 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 RMND1Q9NWS8 449 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 STIM2Q9P246 746 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 FCHSD2O94868 740 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 CKAP2LQ8IYA6 745 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 PPFIBP2Q8ND30 876 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 STXBP4Q6ZWJ1 553 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 CPLX3Q8WVH0 158 aa14.72□□□□□ -0.05
SMC4-202ENST00000357388 PRPF40BQ6NWY9 871 aaKnown RBP14.71□□□□□ -0.05
SMC4-202ENST00000357388 MPHOSPH6Q99547 160 aaKnown RBP14.71□□□□□ -0.05
SMC4-202ENST00000357388 ZSCAN16Q9H4T2 348 aaPredicted RBP14.71□□□□□ -0.05
SMC4-202ENST00000357388 WIZO95785 1651 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 MXRA7P84157 204 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 CCDC50Q8IVM0 306 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 IGF1RP08069 1367 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 STX6O43752 255 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 MAP3K12Q12852 859 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 CEP57Q86XR8 500 aa14.71□□□□□ -0.05
SMC4-202ENST00000357388 ZNF444Q8N0Y2 327 aaPredicted RBP14.71□□□□□ -0.05
SMC4-202ENST00000357388 ACTN2P35609 894 aa14.71□□□□□ -0.06
SMC4-202ENST00000357388 WDR78Q5VTH9 848 aa14.71□□□□□ -0.06
SMC4-202ENST00000357388 RPGRQ92834 1020 aaKnown RBP14.71□□□□□ -0.06
SMC4-202ENST00000357388 IQCGQ9H095 443 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms