RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SGSM2O43147 1006 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 CBX1P83916 185 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 C16orf45Q96MC5 204 aaPredicted RBP8.1□□□□□ -1.11
RTN4-203ENST00000357376 AATKQ6ZMQ8 1374 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 MAP3K5Q99683 1374 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 NRXN1Q9ULB1 1477 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 TPM3P06753 285 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 IL17REQ8NFR9 667 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 TSC1Q92574 1164 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 ATP7BP35670 1465 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 SLC39A6Q13433 755 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 CCDC85AQ96PX6 553 aaPredicted RBP8.09□□□□□ -1.11
RTN4-203ENST00000357376 MROH2AA6NES4 1674 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 KIAA1210Q9ULL0 1709 aa8.09□□□□□ -1.11
RTN4-203ENST00000357376 HSPA4P34932 840 aa8.09□□□□□ -1.12
RTN4-203ENST00000357376 DDIT3P35638 169 aa8.09□□□□□ -1.12
RTN4-203ENST00000357376 NMIQ13287 307 aaPredicted RBP8.09□□□□□ -1.12
RTN4-203ENST00000357376 KLHDC4Q8TBB5 520 aa8.09□□□□□ -1.12
RTN4-203ENST00000357376 ZDHHC9Q9Y397 364 aa8.09□□□□□ -1.12
RTN4-203ENST00000357376 RAD50Q92878 1312 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 KCNQ3O43525 872 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 ZNF771Q7L3S4 317 aaPredicted RBP8.08□□□□□ -1.12
RTN4-203ENST00000357376 DACT1Q9NYF0 836 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 ATP5J2-PTCD1G3V325 749 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 PTCD1O75127 700 aaKnown RBP8.08□□□□□ -1.12
RTN4-203ENST00000357376 CCT2P78371 535 aaKnown RBP8.08□□□□□ -1.12
RTN4-203ENST00000357376 HOMER1Q86YM7 354 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 RASEFQ8IZ41 740 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 FAM227BQ96M60 508 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 SCAND2PQ9GZW5 306 aaPredicted RBP8.08□□□□□ -1.12
RTN4-203ENST00000357376 NEO1Q92859 1461 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 MED14O60244 1454 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 CDK12Q9NYV4 1490 aaPredicted RBP8.08□□□□□ -1.12
RTN4-203ENST00000357376 SBNO1A3KN83 1393 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 SMC2O95347 1197 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 LTKP29376 864 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 FKBP4Q02790 459 aaKnown RBP eCLIP8.08□□□□□ -1.12
RTN4-203ENST00000357376 UVSSAQ2YD98 709 aa8.08□□□□□ -1.12
RTN4-203ENST00000357376 IBTKQ9P2D0 1353 aaPredicted RBP8.07□□□□□ -1.12
RTN4-203ENST00000357376 SYNE3Q6ZMZ3 975 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 DDX46Q7L014 1031 aaKnown RBP8.07□□□□□ -1.12
RTN4-203ENST00000357376 RALYLQ86SE5 291 aaKnown RBP8.07□□□□□ -1.12
RTN4-203ENST00000357376 CREBRFQ8IUR6 639 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 OSBPL3Q9H4L5 887 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 LMTK2Q8IWU2 1503 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 PTPRMP28827 1452 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 CREB3L3Q68CJ9 461 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 UBE3BQ7Z3V4 1068 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 LUZP1Q86V48 1076 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 PDCL2Q8N4E4 241 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 ABCA9Q8IUA7 1624 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 SPDYE4A6NLX3 237 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 KCNA6P17658 529 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 ZNF165P49910 485 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 PTH1RQ03431 593 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 STK38Q15208 465 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 ANO6Q4KMQ2 910 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 STK11IPQ8N1F8 1099 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 CCDC112Q8NEF3 446 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 NDUFB9Q9Y6M9 179 aa8.07□□□□□ -1.12
RTN4-203ENST00000357376 GRM8O00222 908 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
RTN4-203ENST00000357376 LARP1Q6PKG0 1096 aaKnown RBP8.06□□□□□ -1.12
RTN4-203ENST00000357376 CCDC186Q7Z3E2 898 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 BRF1Q92994 677 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 CAMSAP1Q5T5Y3 1602 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 KIDINS220Q9ULH0 1771 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 KRT32Q14532 448 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 RUFY3Q7L099 469 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 CCAR2Q8N163 923 aaKnown RBP8.06□□□□□ -1.12
RTN4-203ENST00000357376 KCNH5Q8NCM2 988 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 SSH3Q8TE77 659 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 CLIP2Q9UDT6 1046 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 NEXMIFQ5QGS0 1516 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 NCOA3Q9Y6Q9 1424 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 PTGS1P23219 599 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 TRDNQ13061 729 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 KSR2Q6VAB6 950 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 RAB11FIP4Q86YS3 637 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 HYPKQ9NX55 129 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 CCDC171Q6TFL3 1326 aa8.06□□□□□ -1.12
RTN4-203ENST00000357376 A0A087WZG4 1122 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ADCK5Q3MIX3 580 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 PPP4R3BQ5MIZ7 849 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 VPS53Q5VIR6 699 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 NFXL1Q6ZNB6 911 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 EDC3Q96F86 508 aaKnown RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 DNAJC25Q9H1X3 360 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 BICC1Q9H694 974 aaKnown RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 TRMT1Q9NXH9 659 aaKnown RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 TTC41PQ6P2S7 1318 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 VWDEQ8N2E2 1590 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 TYRO3Q06418 890 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 CUL4AQ13619 759 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 AMOTQ4VCS5 1084 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms