RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 CGNQ9P2M7 1197 aaKnown RBP14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 PAXBP1Q9Y5B6 917 aa14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 OVOS2A0A0J9YW53 1432 aa14.44□□□□□ -0.1
SMARCAL1-201ENST00000357276 OVOS2Q6IE36 1432 aa14.44□□□□□ -0.1
SMARCAL1-201ENST00000357276 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
SMARCAL1-201ENST00000357276 ADGRL3Q9HAR2 1447 aa14.44□□□□□ -0.1
SMARCAL1-201ENST00000357276 GJB2P29033 226 aa14.44□□□□□ -0.1
SMARCAL1-201ENST00000357276 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
SMARCAL1-201ENST00000357276 TOPAZ1Q8N9V7 1692 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 TTC21AQ8NDW8 1320 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 LTKP29376 864 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 TYRO3Q06418 890 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 VPS53Q5VIR6 699 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 USP42Q9H9J4 1324 aaKnown RBP14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 POLA2Q14181 598 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 ZSCAN25Q6NSZ9 544 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 TM6SF1Q9BZW5 370 aa14.43□□□□□ -0.1
SMARCAL1-201ENST00000357276 RAB11FIP3O75154 756 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 PDIA4P13667 645 aaKnown RBP14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 PLCB2Q00722 1185 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 MAP3K11Q16584 847 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 CCDC186Q7Z3E2 898 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 TTC6Q86TZ1 520 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 TDRD7Q8NHU6 1098 aaKnown RBP14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 SH2B1Q9NRF2 756 aaPredicted RBP14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 TXNDC2Q86VQ3 553 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 KIF18AQ8NI77 898 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 ZSCAN31Q96LW9 406 aaPredicted RBP14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 ZNF75DP51815 510 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 LRMPQ12912 555 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 FLIIQ13045 1269 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 ZSWIM6Q9HCJ5 1215 aa14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 LRRFIP2Q9Y608 721 aaKnown RBP14.42□□□□□ -0.1
SMARCAL1-201ENST00000357276 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.41□□□□□ -0.1
SMARCAL1-201ENST00000357276 LUZP1Q86V48 1076 aa14.41□□□□□ -0.1
SMARCAL1-201ENST00000357276 USP44Q9H0E7 712 aa14.41□□□□□ -0.1
SMARCAL1-201ENST00000357276 CBX8Q9HC52 389 aa14.41□□□□□ -0.1
SMARCAL1-201ENST00000357276 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
SMARCAL1-201ENST00000357276 CDC25BP30305 580 aa14.41□□□□□ -0.1
SMARCAL1-201ENST00000357276 MIS18AQ9NYP9 233 aa14.41□□□□□ -0.1
SMARCAL1-201ENST00000357276 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 NUP62CLQ9H1M0 184 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 NRBP1Q9UHY1 535 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 KDRP35968 1356 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 TNNT1P13805 278 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 LIG1P18858 919 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 C16orf45Q96MC5 204 aaPredicted RBP14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 LARP6Q9BRS8 491 aaKnown RBP14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 CCDC61Q9Y6R9 512 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 IGSF3O75054 1194 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 GTF2E1P29083 439 aaPredicted RBP14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 CCDC83Q8IWF9 413 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 TSPYL4Q9UJ04 414 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 USP31Q70CQ4 1352 aa14.4□□□□□ -0.1
SMARCAL1-201ENST00000357276 CASTP20810 708 aaKnown RBP14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 NUTM1Q86Y26 1132 aa14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 PTPRUQ92729 1446 aa14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 TERF2Q15554 542 aa14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 IL1RAPL2Q9NP60 686 aa14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 TTC21BQ7Z4L5 1316 aa14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 CPA1P15085 419 aa14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 RBM6P78332 1123 aaKnown RBP14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 NAA30Q147X3 362 aaPredicted RBP14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
SMARCAL1-201ENST00000357276 KRT85P78386 507 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 ME3Q16798 604 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 ADCK5Q3MIX3 580 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 ANO6Q4KMQ2 910 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 NYAP1Q6ZVC0 841 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 CNTROBQ8N137 903 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 RHPN1Q8TCX5 695 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 KCND1Q9NSA2 647 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 STK31Q9BXU1 1019 aa14.38□□□□□ -0.11
SMARCAL1-201ENST00000357276 NCKAP5LQ9HCH0 1330 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 FAM193AP78312 1265 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 MTHFSDQ2M296 383 aaKnown RBP14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 ZNF771Q7L3S4 317 aaPredicted RBP14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 CLSTN2Q9H4D0 955 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 PDRG1Q9NUG6 133 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 SLFNL1Q499Z3 407 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 CCDC30Q5VVM6 783 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 SARM1Q6SZW1 724 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 DDX19AQ9NUU7 478 aaKnown RBP14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 MAP3K19Q56UN5 1328 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 FOXO3O43524 673 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 MAP4K4O95819 1239 aaPredicted RBP14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 NECTIN1Q15223 517 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 CCDC144BQ3MJ40 725 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 CCDC144CPQ8IYA2 1237 aa14.37□□□□□ -0.11
SMARCAL1-201ENST00000357276 ZNF397Q8NF99 534 aaPredicted RBP14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 ROBO2Q9HCK4 1378 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 ERBB3P21860 1342 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 TTC41PQ6P2S7 1318 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 NPHP3Q7Z494 1330 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 PRR36Q9H6K5 1346 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 NWD1Q149M9 1564 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 CAVIN2O95810 425 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms