RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 ATP8B2P98198 1209 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 A0A087WWV3 80 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 ADCY5O95622 1261 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 POLR3DP05423 398 aaPredicted RBP18.05■□□□□ 0.48
STRN3-201ENST00000355683 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
STRN3-201ENST00000355683 NPC1L1Q9UHC9 1359 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 NBPF6Q5VWK0 638 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 NBPF4Q96M43 638 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 ZHX1Q9UKY1 873 aaPredicted RBP18.05■□□□□ 0.48
STRN3-201ENST00000355683 IDH1O75874 414 aaKnown RBP18.04■□□□□ 0.48
STRN3-201ENST00000355683 SNX21Q969T3 373 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 IQSEC3Q9UPP2 1182 aaPredicted RBP18.04■□□□□ 0.48
STRN3-201ENST00000355683 LIMCH1Q9UPQ0 1083 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 SYNMO15061 1565 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 PTPRCP08575 1304 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 PRR36Q9H6K5 1346 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 CCDC73Q6ZRK6 1079 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 RALYLQ86SE5 291 aaKnown RBP18.04■□□□□ 0.48
STRN3-201ENST00000355683 ANKRD24Q8TF21 1146 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 CBX1P83916 185 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 HDAC5Q9UQL6 1122 aa18.04■□□□□ 0.48
STRN3-201ENST00000355683 ARHGEF40Q8TER5 1519 aa18.03■□□□□ 0.48
STRN3-201ENST00000355683 SMC2O95347 1197 aa18.03■□□□□ 0.48
STRN3-201ENST00000355683 KRT85P78386 507 aa18.03■□□□□ 0.48
STRN3-201ENST00000355683 C16orf45Q96MC5 204 aaPredicted RBP18.03■□□□□ 0.48
STRN3-201ENST00000355683 MCM2P49736 904 aa18.03■□□□□ 0.48
STRN3-201ENST00000355683 TPD52L1Q16890 204 aaPredicted RBP18.03■□□□□ 0.48
STRN3-201ENST00000355683 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
STRN3-201ENST00000355683 BRF1Q92994 677 aa18.03■□□□□ 0.48
STRN3-201ENST00000355683 RBM8AQ9Y5S9 174 aaKnown RBP18.02■□□□□ 0.48
STRN3-201ENST00000355683 BRPF1P55201 1214 aaPredicted RBP18.02■□□□□ 0.48
STRN3-201ENST00000355683 TIMM10P62072 90 aa18.02■□□□□ 0.48
STRN3-201ENST00000355683 PDILTQ8N807 584 aa18.02■□□□□ 0.48
STRN3-201ENST00000355683 USP44Q9H0E7 712 aa18.02■□□□□ 0.48
STRN3-201ENST00000355683 DBF4Q9UBU7 674 aaPredicted RBP18.02■□□□□ 0.48
STRN3-201ENST00000355683 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.02■□□□□ 0.48
STRN3-201ENST00000355683 V9GYY5 206 aaPredicted RBP18.02■□□□□ 0.48
STRN3-201ENST00000355683 NLRP1Q9C000 1473 aa18.02■□□□□ 0.47
STRN3-201ENST00000355683 ERBB4Q15303 1308 aa18.02■□□□□ 0.47
STRN3-201ENST00000355683 RXRAP19793 462 aa18.01■□□□□ 0.47
STRN3-201ENST00000355683 CLTCQ00610 1675 aaKnown RBP18.01■□□□□ 0.47
STRN3-201ENST00000355683 ADAMTS2O95450 1211 aa18.01■□□□□ 0.47
STRN3-201ENST00000355683 HOXC9P31274 260 aa18.01■□□□□ 0.47
STRN3-201ENST00000355683 BICDL1Q6ZP65 573 aa18.01■□□□□ 0.47
STRN3-201ENST00000355683 CLTCL1P53675 1640 aa18.01■□□□□ 0.47
STRN3-201ENST00000355683 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
STRN3-201ENST00000355683 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
STRN3-201ENST00000355683 SLFNL1Q499Z3 407 aa18.01■□□□□ 0.47
STRN3-201ENST00000355683 RNF17Q9BXT8 1623 aaKnown RBP18■□□□□ 0.47
STRN3-201ENST00000355683 NMIQ13287 307 aaPredicted RBP18■□□□□ 0.47
STRN3-201ENST00000355683 SKIDA1Q1XH10 827 aa18■□□□□ 0.47
STRN3-201ENST00000355683 SYNE3Q6ZMZ3 975 aa18■□□□□ 0.47
STRN3-201ENST00000355683 NUP62CLQ9H1M0 184 aa18■□□□□ 0.47
STRN3-201ENST00000355683 SYT1P21579 422 aa18■□□□□ 0.47
STRN3-201ENST00000355683 PSMA5P28066 241 aa18■□□□□ 0.47
STRN3-201ENST00000355683 RASEFQ8IZ41 740 aa18■□□□□ 0.47
STRN3-201ENST00000355683 LMBRD1Q9NUN5 540 aa18■□□□□ 0.47
STRN3-201ENST00000355683 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
STRN3-201ENST00000355683 TRDNQ13061 729 aa18■□□□□ 0.47
STRN3-201ENST00000355683 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
STRN3-201ENST00000355683 OTUD7BQ6GQQ9 843 aa17.99■□□□□ 0.47
STRN3-201ENST00000355683 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
STRN3-201ENST00000355683 E9PCH4 1651 aa17.99■□□□□ 0.47
STRN3-201ENST00000355683 GPT2Q8TD30 523 aa17.99■□□□□ 0.47
STRN3-201ENST00000355683 BICC1Q9H694 974 aaKnown RBP17.99■□□□□ 0.47
STRN3-201ENST00000355683 SEC62Q99442 399 aaKnown RBP17.99■□□□□ 0.47
STRN3-201ENST00000355683 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 HELBQ8NG08 1087 aaPredicted RBP17.98■□□□□ 0.47
STRN3-201ENST00000355683 PPRC1Q5VV67 1664 aaKnown RBP17.98■□□□□ 0.47
STRN3-201ENST00000355683 KINO60870 393 aaKnown RBP17.98■□□□□ 0.47
STRN3-201ENST00000355683 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 STK38Q15208 465 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
STRN3-201ENST00000355683 ZNF594Q96JF6 807 aaPredicted RBP17.98■□□□□ 0.47
STRN3-201ENST00000355683 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 AGLP35573 1532 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 KIF1BO60333 1816 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 PTH1RQ03431 593 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
STRN3-201ENST00000355683 ZNF335Q9H4Z2 1342 aaPredicted RBP17.97■□□□□ 0.47
STRN3-201ENST00000355683 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
STRN3-201ENST00000355683 NPHP4O75161 1426 aaPredicted RBP17.97■□□□□ 0.47
STRN3-201ENST00000355683 FRMPD1Q5SYB0 1578 aa17.97■□□□□ 0.47
STRN3-201ENST00000355683 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
STRN3-201ENST00000355683 RTL1A6NKG5 1358 aa17.97■□□□□ 0.47
STRN3-201ENST00000355683 TTC39AQ5SRH9 613 aa17.97■□□□□ 0.47
STRN3-201ENST00000355683 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
STRN3-201ENST00000355683 LRSAM1Q6UWE0 723 aa17.96■□□□□ 0.47
STRN3-201ENST00000355683 LUZP1Q86V48 1076 aa17.96■□□□□ 0.47
STRN3-201ENST00000355683 ABCC4O15439 1325 aa17.96■□□□□ 0.47
STRN3-201ENST00000355683 CHGBP05060 677 aa17.96■□□□□ 0.47
STRN3-201ENST00000355683 TOM1O60784 492 aa17.96■□□□□ 0.46
STRN3-201ENST00000355683 TPM4P67936 248 aa17.96■□□□□ 0.46
STRN3-201ENST00000355683 LMTK3Q96Q04 1460 aa17.96■□□□□ 0.46
STRN3-201ENST00000355683 CCDC57Q2TAC2 916 aa17.95■□□□□ 0.46
STRN3-201ENST00000355683 ABCF2Q9UG63 623 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms