RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 POLD1P28340 1107 aa10.04□□□□□ -0.8
COMMD9-202ENST00000355500 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
COMMD9-202ENST00000355500 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-202ENST00000355500 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
COMMD9-202ENST00000355500 TWISTNBQ3B726 338 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-202ENST00000355500 IBTKQ9P2D0 1353 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-202ENST00000355500 MYBPC2Q14324 1141 aa10.03□□□□□ -0.8
COMMD9-202ENST00000355500 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
COMMD9-202ENST00000355500 FAM196AQ6ZSG2 479 aa10.03□□□□□ -0.8
COMMD9-202ENST00000355500 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-202ENST00000355500 HOXC9P31274 260 aa10.02□□□□□ -0.81
COMMD9-202ENST00000355500 INTS3Q68E01 1043 aaKnown RBP10.02□□□□□ -0.81
COMMD9-202ENST00000355500 NUTM2FA1L443 756 aa10.02□□□□□ -0.81
COMMD9-202ENST00000355500 TMEM57Q8N5G2 664 aa10.02□□□□□ -0.81
COMMD9-202ENST00000355500 MAP3K5Q99683 1374 aa10.01□□□□□ -0.81
COMMD9-202ENST00000355500 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
COMMD9-202ENST00000355500 HMGB2P26583 209 aaKnown RBP10.01□□□□□ -0.81
COMMD9-202ENST00000355500 FBXW7Q969H0 707 aa10.01□□□□□ -0.81
COMMD9-202ENST00000355500 DNAJC14Q6Y2X3 702 aaPredicted RBP10.01□□□□□ -0.81
COMMD9-202ENST00000355500 ANKRD13AQ8IZ07 590 aa10.01□□□□□ -0.81
COMMD9-202ENST00000355500 CEMIPQ8WUJ3 1361 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
COMMD9-202ENST00000355500 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
COMMD9-202ENST00000355500 HSP90AB2PQ58FF8 381 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 ITPRIPQ8IWB1 547 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 IP6K1Q92551 441 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 PDZRN3Q9UPQ7 1066 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 HOXB7P09629 217 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 NUCB1Q02818 461 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 SPATA32Q96LK8 384 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 PAPPAQ13219 1627 aa10□□□□□ -0.81
COMMD9-202ENST00000355500 ANP32BQ92688 251 aaKnown RBP9.99□□□□□ -0.81
COMMD9-202ENST00000355500 AMPHP49418 695 aa9.99□□□□□ -0.81
COMMD9-202ENST00000355500 BCL2L13Q9BXK5 485 aa9.99□□□□□ -0.81
COMMD9-202ENST00000355500 PEX14O75381 377 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 NLRP6P59044 892 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 CASC1Q6TDU7 716 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 EYA1Q99502 592 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 TNNQ9UQP3 1299 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 PKD1L3Q7Z443 1732 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 GORABQ5T7V8 394 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 ATP10DQ9P241 1426 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 CEP120Q8N960 986 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 C8orf58Q8NAV2 365 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
COMMD9-202ENST00000355500 MTA3Q9BTC8 594 aa9.98□□□□□ -0.81
COMMD9-202ENST00000355500 PLSCR1O15162 318 aa9.97□□□□□ -0.81
COMMD9-202ENST00000355500 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
COMMD9-202ENST00000355500 GNAT3A8MTJ3 354 aa9.97□□□□□ -0.81
COMMD9-202ENST00000355500 MTHFSDQ2M296 383 aaKnown RBP9.97□□□□□ -0.81
COMMD9-202ENST00000355500 ZNF662Q6ZS27 426 aa9.97□□□□□ -0.81
COMMD9-202ENST00000355500 TSPYL6Q8N831 410 aa9.97□□□□□ -0.81
COMMD9-202ENST00000355500 RETREG2Q8NC44 543 aa9.97□□□□□ -0.81
COMMD9-202ENST00000355500 UPF2Q9HAU5 1272 aaKnown RBP9.97□□□□□ -0.81
COMMD9-202ENST00000355500 BTG4Q9NY30 223 aa9.97□□□□□ -0.81
COMMD9-202ENST00000355500 MRC1P22897 1456 aa9.96□□□□□ -0.81
COMMD9-202ENST00000355500 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.81
COMMD9-202ENST00000355500 RPAP2Q8IXW5 612 aaPredicted RBP9.96□□□□□ -0.81
COMMD9-202ENST00000355500 ABTB2Q8N961 1025 aa9.96□□□□□ -0.81
COMMD9-202ENST00000355500 TUBGCP6Q96RT7 1819 aa9.96□□□□□ -0.81
COMMD9-202ENST00000355500 RGPD2P0DJD1 1756 aa9.96□□□□□ -0.82
COMMD9-202ENST00000355500 SSFA2P28290 1259 aa9.96□□□□□ -0.82
COMMD9-202ENST00000355500 FOSBP53539 338 aa9.96□□□□□ -0.82
COMMD9-202ENST00000355500 SKAP1Q86WV1 359 aa9.96□□□□□ -0.82
COMMD9-202ENST00000355500 MICAL1Q8TDZ2 1067 aa9.96□□□□□ -0.82
COMMD9-202ENST00000355500 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
COMMD9-202ENST00000355500 CCT4P50991 539 aaKnown RBP9.95□□□□□ -0.82
COMMD9-202ENST00000355500 BMP2KLQ5H9B9 411 aa9.95□□□□□ -0.82
COMMD9-202ENST00000355500 OTUD6BQ8N6M0 293 aa9.95□□□□□ -0.82
COMMD9-202ENST00000355500 TBC1D32Q96NH3 1257 aa9.95□□□□□ -0.82
COMMD9-202ENST00000355500 SCN11AQ9UI33 1791 aa9.95□□□□□ -0.82
COMMD9-202ENST00000355500 AMOTQ4VCS5 1084 aa9.95□□□□□ -0.82
COMMD9-202ENST00000355500 PPFIA4O75335 1185 aa9.94□□□□□ -0.82
COMMD9-202ENST00000355500 TNS2Q63HR2 1409 aa9.94□□□□□ -0.82
COMMD9-202ENST00000355500 CHD1LQ86WJ1 897 aa9.94□□□□□ -0.82
COMMD9-202ENST00000355500 THUMPD2Q9BTF0 503 aaKnown RBP9.94□□□□□ -0.82
COMMD9-202ENST00000355500 PRDM11Q9NQV5 511 aa9.94□□□□□ -0.82
COMMD9-202ENST00000355500 BECN1Q14457 450 aa9.93□□□□□ -0.82
COMMD9-202ENST00000355500 ARHGEF25Q86VW2 580 aa9.93□□□□□ -0.82
COMMD9-202ENST00000355500 ANKRD44Q8N8A2 993 aa9.93□□□□□ -0.82
COMMD9-202ENST00000355500 ZNF831Q5JPB2 1677 aa9.93□□□□□ -0.82
COMMD9-202ENST00000355500 LY75O60449 1722 aa9.93□□□□□ -0.82
COMMD9-202ENST00000355500 RGPD5Q99666 1765 aa9.93□□□□□ -0.82
COMMD9-202ENST00000355500 ANKRD62A6NC57 917 aa9.93□□□□□ -0.82
COMMD9-202ENST00000355500 PAK3O75914 559 aaPredicted RBP9.93□□□□□ -0.82
COMMD9-202ENST00000355500 XPCQ01831 940 aaPredicted RBP9.92□□□□□ -0.82
COMMD9-202ENST00000355500 TAF7Q15545 349 aaPredicted RBP9.92□□□□□ -0.82
COMMD9-202ENST00000355500 CCDC30Q5VVM6 783 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 PROM2Q8N271 834 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 SDR16C5Q8N3Y7 309 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 TRIM44Q96DX7 344 aaPredicted RBP9.92□□□□□ -0.82
COMMD9-202ENST00000355500 DCTPP1Q9H773 170 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 LAMB4A4D0S4 1761 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 MAP4K4O95819 1239 aaPredicted RBP9.92□□□□□ -0.82
COMMD9-202ENST00000355500 AKAP4Q5JQC9 854 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 PNMA2Q9UL42 364 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 HEG1Q9ULI3 1381 aa9.92□□□□□ -0.82
COMMD9-202ENST00000355500 DHX16O60231 1041 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms