RNA–Protein interactions for RNA: ENST00000355192.7

MSRB3-202, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 1 (best) BASIC

Gene MSRB3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-202ENST00000355192 ASXL2Q76L83 1435 aa16.34■□□□□ 0.21
MSRB3-202ENST00000355192 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
MSRB3-202ENST00000355192 CPA1P15085 419 aa16.34■□□□□ 0.21
MSRB3-202ENST00000355192 CCDC57Q2TAC2 916 aa16.34■□□□□ 0.21
MSRB3-202ENST00000355192 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
MSRB3-202ENST00000355192 NEK1Q96PY6 1258 aa16.33■□□□□ 0.21
MSRB3-202ENST00000355192 ATP10AO60312 1499 aa16.33■□□□□ 0.21
MSRB3-202ENST00000355192 STX1AQ16623 288 aa16.33■□□□□ 0.21
MSRB3-202ENST00000355192 BRMS1Q9HCU9 246 aa16.33■□□□□ 0.21
MSRB3-202ENST00000355192 CWC15Q9P013 229 aaKnown RBP16.33■□□□□ 0.21
MSRB3-202ENST00000355192 ABCC4O15439 1325 aa16.33■□□□□ 0.2
MSRB3-202ENST00000355192 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
MSRB3-202ENST00000355192 PPFIBP1Q86W92 1011 aa16.33■□□□□ 0.2
MSRB3-202ENST00000355192 C8orf76Q96K31 380 aa16.33■□□□□ 0.2
MSRB3-202ENST00000355192 IMMTQ16891 758 aaKnown RBP16.33■□□□□ 0.2
MSRB3-202ENST00000355192 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.2
MSRB3-202ENST00000355192 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
MSRB3-202ENST00000355192 CNNM1Q9NRU3 951 aa16.33■□□□□ 0.2
MSRB3-202ENST00000355192 CAVIN2O95810 425 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
MSRB3-202ENST00000355192 TYRO3Q06418 890 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 CCDC85AQ96PX6 553 aaPredicted RBP16.32■□□□□ 0.2
MSRB3-202ENST00000355192 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 FAM177BA6PVY3 158 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 BIN1O00499 593 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 CCAR1Q8IX12 1150 aaKnown RBP16.32■□□□□ 0.2
MSRB3-202ENST00000355192 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 PLEKHF1Q96S99 279 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 CHL1O00533 1208 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 URI1O94763 535 aaPredicted RBP16.32■□□□□ 0.2
MSRB3-202ENST00000355192 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 BRF1Q92994 677 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 DNAJC25Q9H1X3 360 aa16.32■□□□□ 0.2
MSRB3-202ENST00000355192 CDKL5O76039 1030 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
MSRB3-202ENST00000355192 HMG20BQ9P0W2 317 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 CLSTN1O94985 981 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 ATF3P18847 181 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 CEP135Q66GS9 1140 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 CHAMP1Q96JM3 812 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 GADD45BO75293 160 aaPredicted RBP16.31■□□□□ 0.2
MSRB3-202ENST00000355192 PTGS1P23219 599 aa16.31■□□□□ 0.2
MSRB3-202ENST00000355192 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
MSRB3-202ENST00000355192 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
MSRB3-202ENST00000355192 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
MSRB3-202ENST00000355192 PAXBP1Q9Y5B6 917 aa16.3■□□□□ 0.2
MSRB3-202ENST00000355192 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
MSRB3-202ENST00000355192 GSDMDP57764 484 aa16.3■□□□□ 0.2
MSRB3-202ENST00000355192 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
MSRB3-202ENST00000355192 TMC6Q7Z403 805 aa16.3■□□□□ 0.2
MSRB3-202ENST00000355192 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
MSRB3-202ENST00000355192 BRD1O95696 1058 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 C17orf53Q8N3J3 647 aaPredicted RBP16.29■□□□□ 0.2
MSRB3-202ENST00000355192 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
MSRB3-202ENST00000355192 AK7Q96M32 723 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 RUFY1Q96T51 708 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
MSRB3-202ENST00000355192 ZSCAN16Q9H4T2 348 aaPredicted RBP16.29■□□□□ 0.2
MSRB3-202ENST00000355192 CFAP65Q6ZU64 1925 aaKnown RBP16.29■□□□□ 0.2
MSRB3-202ENST00000355192 CCDC69A6NI79 296 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 DTNBO60941 627 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
MSRB3-202ENST00000355192 TERF1P54274 439 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 LEKR1Q6ZMV7 388 aa16.29■□□□□ 0.2
MSRB3-202ENST00000355192 SKILP12757 684 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 A0A087WZG4 1122 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 PNMA6EA0A0J9YXQ4 647 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 NUP133Q8WUM0 1156 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
MSRB3-202ENST00000355192 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
MSRB3-202ENST00000355192 PHAXQ9H814 394 aaKnown RBP16.28■□□□□ 0.2
MSRB3-202ENST00000355192 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 GOLIM4O00461 696 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 IDH1O75874 414 aaKnown RBP16.28■□□□□ 0.2
MSRB3-202ENST00000355192 NMIQ13287 307 aaPredicted RBP16.28■□□□□ 0.2
MSRB3-202ENST00000355192 VPS53Q5VIR6 699 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 EYA1Q99502 592 aa16.28■□□□□ 0.2
MSRB3-202ENST00000355192 TTC41PQ6P2S7 1318 aa16.27■□□□□ 0.2
MSRB3-202ENST00000355192 TOP1P11387 765 aaKnown RBP16.27■□□□□ 0.2
MSRB3-202ENST00000355192 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-202ENST00000355192 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
MSRB3-202ENST00000355192 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.2
MSRB3-202ENST00000355192 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
MSRB3-202ENST00000355192 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-202ENST00000355192 GPT2Q8TD30 523 aa16.27■□□□□ 0.2
MSRB3-202ENST00000355192 POLR3DP05423 398 aaPredicted RBP16.27■□□□□ 0.19
MSRB3-202ENST00000355192 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.19
MSRB3-202ENST00000355192 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.19
MSRB3-202ENST00000355192 ZSCAN12O43309 604 aa16.26■□□□□ 0.19
MSRB3-202ENST00000355192 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
MSRB3-202ENST00000355192 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
MSRB3-202ENST00000355192 GOLGA8BA8MQT2 603 aa16.26■□□□□ 0.19
MSRB3-202ENST00000355192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms