RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 FGFR1OPO95684 399 aaKnown RBP20.69■□□□□ 0.9
CRKL-201ENST00000354336 FAM83GA6ND36 823 aa20.68■□□□□ 0.9
CRKL-201ENST00000354336 GOLIM4O00461 696 aa20.68■□□□□ 0.9
CRKL-201ENST00000354336 CAVIN2O95810 425 aa20.68■□□□□ 0.9
CRKL-201ENST00000354336 NEK1Q96PY6 1258 aa20.68■□□□□ 0.9
CRKL-201ENST00000354336 FBXO31Q5XUX0 539 aaPredicted RBP20.68■□□□□ 0.9
CRKL-201ENST00000354336 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
CRKL-201ENST00000354336 CCDC194A0A1B0GVG4 234 aa20.68■□□□□ 0.9
CRKL-201ENST00000354336 TTF1Q15361 905 aaPredicted RBP20.68■□□□□ 0.9
CRKL-201ENST00000354336 C16orf45Q96MC5 204 aaPredicted RBP20.68■□□□□ 0.9
CRKL-201ENST00000354336 YEATS4O95619 227 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 TMEM266Q2M3C6 531 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 ZNF444Q8N0Y2 327 aaPredicted RBP20.67■□□□□ 0.9
CRKL-201ENST00000354336 PI4KAP2A4QPH2 592 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 DESP17661 470 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 HMGB2P26583 209 aaKnown RBP20.67■□□□□ 0.9
CRKL-201ENST00000354336 VPS36Q86VN1 386 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 PI4KAP1Q8N8J0 262 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 NUP88Q99567 741 aaPredicted RBP20.67■□□□□ 0.9
CRKL-201ENST00000354336 POTEJP0CG39 1038 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 NLRP5P59047 1200 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 TRMT1Q9NXH9 659 aaKnown RBP20.67■□□□□ 0.9
CRKL-201ENST00000354336 MATR3P43243 847 aaKnown RBP eCLIP20.67■□□□□ 0.96e-6■■□□□ 12.5
CRKL-201ENST00000354336 ZNF165P49910 485 aa20.67■□□□□ 0.9
CRKL-201ENST00000354336 ZPR1O75312 459 aa20.66■□□□□ 0.9
CRKL-201ENST00000354336 GBP2P32456 591 aaPredicted RBP20.66■□□□□ 0.9
CRKL-201ENST00000354336 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
CRKL-201ENST00000354336 TSHZ3Q63HK5 1081 aa20.66■□□□□ 0.9
CRKL-201ENST00000354336 RBM27Q9P2N5 1060 aaKnown RBP20.66■□□□□ 0.9
CRKL-201ENST00000354336 TNIP1Q15025 636 aa20.66■□□□□ 0.9
CRKL-201ENST00000354336 TMC6Q7Z403 805 aa20.66■□□□□ 0.9
CRKL-201ENST00000354336 TMX3Q96JJ7 454 aa20.66■□□□□ 0.9
CRKL-201ENST00000354336 PPP1R1BQ9UD71 204 aaPredicted RBP20.66■□□□□ 0.9
CRKL-201ENST00000354336 USO1O60763 962 aaKnown RBP20.66■□□□□ 0.9
CRKL-201ENST00000354336 CETN2P41208 172 aa20.66■□□□□ 0.9
CRKL-201ENST00000354336 CRACR2BQ8N4Y2 399 aaPredicted RBP20.66■□□□□ 0.9
CRKL-201ENST00000354336 FOXO3O43524 673 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 ZSCAN23Q3MJ62 389 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 TAF3Q5VWG9 929 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 PLCD4Q9BRC7 762 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 KIF20AO95235 890 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 CBX1P83916 185 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 RHPN1Q8TCX5 695 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 PHF23Q9BUL5 403 aaPredicted RBP20.65■□□□□ 0.9
CRKL-201ENST00000354336 SDSP20132 328 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CRKL-201ENST00000354336 ORC3Q9UBD5 711 aaPredicted RBP20.65■□□□□ 0.9
CRKL-201ENST00000354336 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 EZRP15311 586 aaKnown RBP20.65■□□□□ 0.9
CRKL-201ENST00000354336 ZBTB3Q9H5J0 574 aa20.65■□□□□ 0.9
CRKL-201ENST00000354336 CWC25Q9NXE8 425 aaPredicted RBP20.65■□□□□ 0.9
CRKL-201ENST00000354336 BIN1O00499 593 aa20.64■□□□□ 0.9
CRKL-201ENST00000354336 SSR1P43307 286 aaKnown RBP20.64■□□□□ 0.9
CRKL-201ENST00000354336 CPLX3Q8WVH0 158 aa20.64■□□□□ 0.9
CRKL-201ENST00000354336 ZSCAN16Q9H4T2 348 aaPredicted RBP20.64■□□□□ 0.9
CRKL-201ENST00000354336 ANKIB1Q9P2G1 1089 aa20.64■□□□□ 0.89
CRKL-201ENST00000354336 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.89
CRKL-201ENST00000354336 SHTN1A0MZ66 631 aa20.64■□□□□ 0.89
CRKL-201ENST00000354336 ZSCAN22P10073 491 aaPredicted RBP20.64■□□□□ 0.89
CRKL-201ENST00000354336 ASXL1Q8IXJ9 1541 aa20.64■□□□□ 0.89
CRKL-201ENST00000354336 TMEM67Q5HYA8 995 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 KRI1Q8N9T8 703 aaKnown RBP20.63■□□□□ 0.89
CRKL-201ENST00000354336 SF3B2Q13435 895 aaKnown RBP20.63■□□□□ 0.89
CRKL-201ENST00000354336 LRSAM1Q6UWE0 723 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 IFNL2Q8IZJ0 200 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 NCOA7Q8NI08 942 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 PAFAH1B1P43034 410 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 GOLGA6L9A6NEM1 432 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 UBE3BQ7Z3V4 1068 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 LUZP1Q86V48 1076 aa20.63■□□□□ 0.89
CRKL-201ENST00000354336 TEX13AQ9BXU3 409 aaPredicted RBP20.62■□□□□ 0.89
CRKL-201ENST00000354336 PYM1Q9BRP8 204 aaKnown RBP20.62■□□□□ 0.89
CRKL-201ENST00000354336 KANK3Q6NY19 840 aa20.62■□□□□ 0.89
CRKL-201ENST00000354336 LDHAL6AQ6ZMR3 332 aa20.62■□□□□ 0.89
CRKL-201ENST00000354336 POTEB2H3BUK9 544 aa20.62■□□□□ 0.89
CRKL-201ENST00000354336 METAP2P50579 478 aaKnown RBP eCLIP20.62■□□□□ 0.896e-11■□□□□ 10.2
CRKL-201ENST00000354336 MEIS3Q99687 375 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 ANAPC15P60006 121 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 UBA5Q9GZZ9 404 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 SNRKQ9NRH2 765 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 ACEP12821 1306 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 CCDC96Q2M329 555 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 CCDC102BQ68D86 513 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 PDE1AP54750 535 aa20.61■□□□□ 0.89
CRKL-201ENST00000354336 ATP5J2-PTCD1G3V325 749 aa20.6■□□□□ 0.89
CRKL-201ENST00000354336 GPTP24298 496 aa20.6■□□□□ 0.89
CRKL-201ENST00000354336 SLF2Q8IX21 1173 aa20.6■□□□□ 0.89
CRKL-201ENST00000354336 CCDC150Q8NCX0 1101 aa20.6■□□□□ 0.89
CRKL-201ENST00000354336 SNW1Q13573 536 aaKnown RBP20.6■□□□□ 0.89
CRKL-201ENST00000354336 TDRD12Q587J7 1177 aaKnown RBP20.6■□□□□ 0.89
CRKL-201ENST00000354336 KIF5BP33176 963 aa20.6■□□□□ 0.89
CRKL-201ENST00000354336 HAND2P61296 217 aa20.6■□□□□ 0.89
CRKL-201ENST00000354336 CCDC12Q8WUD4 166 aaPredicted RBP20.6■□□□□ 0.89
CRKL-201ENST00000354336 MTIF2P46199 727 aaKnown RBP20.6■□□□□ 0.89
CRKL-201ENST00000354336 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
CRKL-201ENST00000354336 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
CRKL-201ENST00000354336 AMPD3Q01432 767 aa20.59■□□□□ 0.89
CRKL-201ENST00000354336 PRKCSHP14314 528 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms