RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 CASQ1P31415 396 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 GTF2A1P52655 376 aaPredicted RBP16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 TXLNBQ8N3L3 684 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 RIC3Q7Z5B4 369 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 CERS3Q8IU89 383 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
DNMT3B-204ENST00000353855 TRDNQ13061 729 aa16.61■□□□□ 0.25
DNMT3B-204ENST00000353855 ZNF75DP51815 510 aa16.61■□□□□ 0.25
DNMT3B-204ENST00000353855 JAKMIP3Q5VZ66 844 aa16.61■□□□□ 0.25
DNMT3B-204ENST00000353855 KRBA2Q6ZNG9 492 aa16.61■□□□□ 0.25
DNMT3B-204ENST00000353855 PRDM4Q9UKN5 801 aa16.61■□□□□ 0.25
DNMT3B-204ENST00000353855 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
DNMT3B-204ENST00000353855 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 ARFGAP3Q9NP61 516 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 NPHP3Q7Z494 1330 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 ZSCAN12O43309 604 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 CBFA2T2O43439 604 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 SIRT2Q8IXJ6 389 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 CTAGE5O15320 804 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 NSD2O96028 1365 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 WDR7Q9Y4E6 1490 aa16.6■□□□□ 0.25
DNMT3B-204ENST00000353855 KIF4BQ2VIQ3 1234 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 PPFIBP1Q86W92 1011 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 DDX58O95786 925 aaKnown RBP16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 RDXP35241 583 aaKnown RBP16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 CPLX3Q8WVH0 158 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 RSPH14Q9UHP6 348 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 EID1Q9Y6B2 187 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 FANCAO15360 1455 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 PHACTR2O75167 634 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 LMOD1P29536 600 aaPredicted RBP16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 C1orf141Q5JVX7 400 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 ANKRD20A12PQ8NF67 263 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 ZDHHC9Q9Y397 364 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 IDI1Q13907 227 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 RASSF4Q9H2L5 321 aa16.59■□□□□ 0.25
DNMT3B-204ENST00000353855 LIG1P18858 919 aa16.58■□□□□ 0.25
DNMT3B-204ENST00000353855 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.25
DNMT3B-204ENST00000353855 MSH6P52701 1360 aa16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 RBM8AQ9Y5S9 174 aaKnown RBP16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 POLR3DP05423 398 aaPredicted RBP16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 G2E3Q7L622 706 aa16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 NEK11Q8NG66 645 aa16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 BRF1Q92994 677 aa16.58■□□□□ 0.24
DNMT3B-204ENST00000353855 CAPN2P17655 700 aa16.57■□□□□ 0.24
DNMT3B-204ENST00000353855 NLRP6P59044 892 aa16.57■□□□□ 0.24
DNMT3B-204ENST00000353855 CAVIN2O95810 425 aa16.57■□□□□ 0.24
DNMT3B-204ENST00000353855 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
DNMT3B-204ENST00000353855 ADGBQ8N7X0 1667 aa16.57■□□□□ 0.24
DNMT3B-204ENST00000353855 ABCC2Q92887 1545 aa16.57■□□□□ 0.24
DNMT3B-204ENST00000353855 AKAP17AQ02040 695 aaKnown RBP16.57■□□□□ 0.24
DNMT3B-204ENST00000353855 CCDC12Q8WUD4 166 aaPredicted RBP16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 ECHDC1Q9NTX5 307 aa16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 IFNKQ9P0W0 207 aa16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 ANXA1P04083 346 aa16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 CENPHQ9H3R5 247 aa16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 SNX14Q9Y5W7 946 aa16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 KRT32Q14532 448 aa16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 SAFBQ15424 915 aaKnown RBP eCLIP16.56■□□□□ 0.24
DNMT3B-204ENST00000353855 ATP8B2P98198 1209 aa16.55■□□□□ 0.24
DNMT3B-204ENST00000353855 FAM69CQ0P6D2 419 aa16.55■□□□□ 0.24
DNMT3B-204ENST00000353855 CCDC150Q8NCX0 1101 aa16.55■□□□□ 0.24
DNMT3B-204ENST00000353855 NAP1L1P55209 391 aaKnown RBP16.55■□□□□ 0.24
DNMT3B-204ENST00000353855 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
DNMT3B-204ENST00000353855 RAB11FIP4Q86YS3 637 aa16.55■□□□□ 0.24
DNMT3B-204ENST00000353855 RTEL1-TNFRSF6BF6WH68 1400 aa16.55■□□□□ 0.24
DNMT3B-204ENST00000353855 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 NCBP1Q09161 790 aaKnown RBP16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 FILIP1LQ4L180 1135 aa16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 KLHL10Q6JEL2 608 aa16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 VPS18Q9P253 973 aa16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 JMYQ8N9B5 988 aa16.54■□□□□ 0.24
DNMT3B-204ENST00000353855 EVCP57679 992 aa16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 CARD6Q9BX69 1037 aa16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 UBASH3AP57075 661 aa16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 KIAA0754O94854 1291 aa16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 PAXIP1Q6ZW49 1069 aaPredicted RBP16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 DHX16O60231 1041 aaKnown RBP16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 SMARCE1Q969G3 411 aa16.53■□□□□ 0.24
DNMT3B-204ENST00000353855 CEP170Q5SW79 1584 aa16.52■□□□□ 0.24
DNMT3B-204ENST00000353855 CACTINQ8WUQ7 758 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms