RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 MAP3K2Q9Y2U5 619 aa26.58■■□□□ 1.85
NKX2-4-201ENST00000351817 HEG1Q9ULI3 1381 aa26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 CAMTA1Q9Y6Y1 1673 aa26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 GIGYF1O75420 1035 aaPredicted RBP26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 KSR2Q6VAB6 950 aa26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 CLASRPQ8N2M8 674 aaKnown RBP26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 DDX17Q92841 729 aaKnown RBP26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 C9orf78Q9NZ63 289 aaPredicted RBP26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 WDR33Q9C0J8 1336 aaKnown RBP26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 NSFL1CQ9UNZ2 370 aaKnown RBP26.57■■□□□ 1.84
NKX2-4-201ENST00000351817 RGPD5Q99666 1765 aa26.56■■□□□ 1.84
NKX2-4-201ENST00000351817 ERC1Q8IUD2 1116 aa26.55■■□□□ 1.84
NKX2-4-201ENST00000351817 ZSCAN30Q86W11 494 aa26.55■■□□□ 1.84
NKX2-4-201ENST00000351817 RUFY2Q8WXA3 655 aa26.55■■□□□ 1.84
NKX2-4-201ENST00000351817 TTC14Q96N46 770 aa26.55■■□□□ 1.84
NKX2-4-201ENST00000351817 CWC27Q6UX04 472 aaKnown RBP26.54■■□□□ 1.84
NKX2-4-201ENST00000351817 SYCE3A1L190 88 aa26.54■■□□□ 1.84
NKX2-4-201ENST00000351817 GPATCH3Q96I76 525 aa26.54■■□□□ 1.84
NKX2-4-201ENST00000351817 SIPA1L3O60292 1781 aaPredicted RBP26.54■■□□□ 1.84
NKX2-4-201ENST00000351817 HS1BP3Q53T59 392 aa26.53■■□□□ 1.84
NKX2-4-201ENST00000351817 DIAPH3Q9NSV4 1193 aa26.53■■□□□ 1.84
NKX2-4-201ENST00000351817 HYPKQ9NX55 129 aa26.53■■□□□ 1.84
NKX2-4-201ENST00000351817 ECHDC1Q9NTX5 307 aa26.53■■□□□ 1.84
NKX2-4-201ENST00000351817 PROSER3Q2NL68 480 aa26.52■■□□□ 1.84
NKX2-4-201ENST00000351817 SYAP1Q96A49 352 aaPredicted RBP26.52■■□□□ 1.84
NKX2-4-201ENST00000351817 PDLIM2Q96JY6 352 aa26.52■■□□□ 1.84
NKX2-4-201ENST00000351817 LMTK3Q96Q04 1460 aa26.52■■□□□ 1.84
NKX2-4-201ENST00000351817 RASEFQ8IZ41 740 aa26.51■■□□□ 1.84
NKX2-4-201ENST00000351817 ZC3H6P61129 1189 aaKnown RBP26.51■■□□□ 1.83
NKX2-4-201ENST00000351817 LIMCH1Q9UPQ0 1083 aa26.5■■□□□ 1.83
NKX2-4-201ENST00000351817 IFIT2P09913 472 aaKnown RBP26.5■■□□□ 1.83
NKX2-4-201ENST00000351817 AK2P54819 239 aa26.5■■□□□ 1.83
NKX2-4-201ENST00000351817 CADPS2Q86UW7 1296 aa26.5■■□□□ 1.83
NKX2-4-201ENST00000351817 SPG7Q9UQ90 795 aa26.5■■□□□ 1.83
NKX2-4-201ENST00000351817 LINS1Q8NG48 757 aa26.49■■□□□ 1.83
NKX2-4-201ENST00000351817 ADAMTS7Q9UKP4 1686 aa26.49■■□□□ 1.83
NKX2-4-201ENST00000351817 RPAP1Q9BWH6 1393 aaPredicted RBP26.49■■□□□ 1.83
NKX2-4-201ENST00000351817 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
NKX2-4-201ENST00000351817 CWF19L2Q2TBE0 894 aaKnown RBP26.49■■□□□ 1.83
NKX2-4-201ENST00000351817 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.49■■□□□ 1.83
NKX2-4-201ENST00000351817 ERBB3P21860 1342 aa26.48■■□□□ 1.83
NKX2-4-201ENST00000351817 DDX58O95786 925 aaKnown RBP26.48■■□□□ 1.83
NKX2-4-201ENST00000351817 PA2G4Q9UQ80 394 aaKnown RBP26.47■■□□□ 1.83
NKX2-4-201ENST00000351817 UTYO14607 1347 aa26.47■■□□□ 1.83
NKX2-4-201ENST00000351817 MSNP26038 577 aaKnown RBP26.47■■□□□ 1.83
NKX2-4-201ENST00000351817 RUFY3Q7L099 469 aa26.47■■□□□ 1.83
NKX2-4-201ENST00000351817 EVI5LQ96CN4 794 aa26.47■■□□□ 1.83
NKX2-4-201ENST00000351817 DDX21Q9NR30 783 aaKnown RBP eCLIP26.47■■□□□ 1.83
NKX2-4-201ENST00000351817 PRAMEF22A3QJZ6 481 aa26.46■■□□□ 1.83
NKX2-4-201ENST00000351817 GRM8O00222 908 aa26.46■■□□□ 1.83
NKX2-4-201ENST00000351817 NPHP3Q7Z494 1330 aa26.46■■□□□ 1.83
NKX2-4-201ENST00000351817 USP48Q86UV5 1035 aa26.45■■□□□ 1.82
NKX2-4-201ENST00000351817 TMEM87AQ8NBN3 555 aa26.45■■□□□ 1.82
NKX2-4-201ENST00000351817 PHF14O94880 888 aa26.45■■□□□ 1.82
NKX2-4-201ENST00000351817 CASTP20810 708 aaKnown RBP26.45■■□□□ 1.82
NKX2-4-201ENST00000351817 AACSQ86V21 672 aa26.45■■□□□ 1.82
NKX2-4-201ENST00000351817 KCNB2Q92953 911 aa26.45■■□□□ 1.82
NKX2-4-201ENST00000351817 COL18A1P39060 1754 aa26.44■■□□□ 1.82
NKX2-4-201ENST00000351817 ZSCAN22P10073 491 aaPredicted RBP26.44■■□□□ 1.82
NKX2-4-201ENST00000351817 SUCLG2Q96I99 432 aa26.44■■□□□ 1.82
NKX2-4-201ENST00000351817 TM6SF1Q9BZW5 370 aa26.44■■□□□ 1.82
NKX2-4-201ENST00000351817 TCHHQ07283 1943 aa26.44■■□□□ 1.82
NKX2-4-201ENST00000351817 PTH1RQ03431 593 aa26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 TSPY26PQ9H489 355 aa26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 TNS3Q68CZ2 1445 aa26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 G3BP1Q13283 466 aaKnown RBP eCLIP26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 FOXD4L6Q3SYB3 417 aaPredicted RBP26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 FOXD4L3Q6VB84 417 aaPredicted RBP26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 SMC3Q9UQE7 1217 aa26.43■■□□□ 1.82
NKX2-4-201ENST00000351817 GADD45BO75293 160 aaPredicted RBP26.42■■□□□ 1.82
NKX2-4-201ENST00000351817 VPS53Q5VIR6 699 aa26.42■■□□□ 1.82
NKX2-4-201ENST00000351817 GDPD2Q9HCC8 539 aa26.42■■□□□ 1.82
NKX2-4-201ENST00000351817 HIP1O00291 1037 aa26.42■■□□□ 1.82
NKX2-4-201ENST00000351817 STX6O43752 255 aa26.42■■□□□ 1.82
NKX2-4-201ENST00000351817 CABLES1Q8TDN4 633 aa26.42■■□□□ 1.82
NKX2-4-201ENST00000351817 KAZALD1Q96I82 304 aa26.42■■□□□ 1.82
NKX2-4-201ENST00000351817 ZSCAN31Q96LW9 406 aaPredicted RBP26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 BICC1Q9H694 974 aaKnown RBP26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 NOL7Q9UMY1 257 aaKnown RBP26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 SASH1O94885 1247 aa26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 SYT1P21579 422 aa26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 PDIA6Q15084 440 aa26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 PRPF40BQ6NWY9 871 aaKnown RBP26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 ZSWIM6Q9HCJ5 1215 aa26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 PDRG1Q9NUG6 133 aa26.41■■□□□ 1.82
NKX2-4-201ENST00000351817 AIMP1Q12904 312 aaKnown RBP26.4■■□□□ 1.82
NKX2-4-201ENST00000351817 JAKMIP1Q96N16 626 aaKnown RBP26.4■■□□□ 1.82
NKX2-4-201ENST00000351817 CCDC171Q6TFL3 1326 aa26.4■■□□□ 1.82
NKX2-4-201ENST00000351817 ATP6V1DQ9Y5K8 247 aa26.39■■□□□ 1.82
NKX2-4-201ENST00000351817 CYP46A1Q9Y6A2 500 aa26.39■■□□□ 1.82
NKX2-4-201ENST00000351817 KDM4FA0A1W2PPD8 638 aa26.39■■□□□ 1.81
NKX2-4-201ENST00000351817 CPA1P15085 419 aa26.39■■□□□ 1.81
NKX2-4-201ENST00000351817 NECTIN1Q15223 517 aa26.39■■□□□ 1.81
NKX2-4-201ENST00000351817 LARP1Q6PKG0 1096 aaKnown RBP26.39■■□□□ 1.81
NKX2-4-201ENST00000351817 LARP6Q9BRS8 491 aaKnown RBP26.39■■□□□ 1.81
NKX2-4-201ENST00000351817 SH2B1Q9NRF2 756 aaPredicted RBP26.39■■□□□ 1.81
NKX2-4-201ENST00000351817 SPATA31A3Q5VYP0 1347 aa26.39■■□□□ 1.81
NKX2-4-201ENST00000351817 RIC3Q7Z5B4 369 aa26.38■■□□□ 1.81
NKX2-4-201ENST00000351817 EAF2Q96CJ1 260 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms