RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TWISTNBQ3B726 338 aaPredicted RBP15.58■□□□□ 0.09
IFT88-202ENST00000351808 TRAK1Q9UPV9 953 aa15.58■□□□□ 0.09
IFT88-202ENST00000351808 RUFY3Q7L099 469 aa15.58■□□□□ 0.08
IFT88-202ENST00000351808 GOLGA6L19H0YKK7 550 aa15.58■□□□□ 0.08
IFT88-202ENST00000351808 EXOC4Q96A65 974 aa15.58■□□□□ 0.08
IFT88-202ENST00000351808 IL25Q9H293 177 aa15.58■□□□□ 0.08
IFT88-202ENST00000351808 ANKRD65E5RJM6 399 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 LARGE1O95461 756 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 FOXR1Q6PIV2 292 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 FERMT3Q86UX7 667 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 CCDC83Q8IWF9 413 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 LIMCH1Q9UPQ0 1083 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 EIF3CLB5ME19 914 aaKnown RBP15.57■□□□□ 0.08
IFT88-202ENST00000351808 E4F1Q66K89 784 aaPredicted RBP15.57■□□□□ 0.08
IFT88-202ENST00000351808 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
IFT88-202ENST00000351808 C8orf58Q8NAV2 365 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 MRFAP1L1Q96HT8 127 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 EIF3CQ99613 913 aaKnown RBP15.57■□□□□ 0.08
IFT88-202ENST00000351808 CXorf56Q9H5V9 222 aa15.57■□□□□ 0.08
IFT88-202ENST00000351808 GOLGA6L4A6NEF3 574 aa15.56■□□□□ 0.08
IFT88-202ENST00000351808 IQUBQ8NA54 791 aa15.56■□□□□ 0.08
IFT88-202ENST00000351808 SAMD9LQ8IVG5 1584 aa15.56■□□□□ 0.08
IFT88-202ENST00000351808 ATP8B1O43520 1251 aa15.56■□□□□ 0.08
IFT88-202ENST00000351808 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
IFT88-202ENST00000351808 PPP1R13BQ96KQ4 1090 aa15.56■□□□□ 0.08
IFT88-202ENST00000351808 GGNBP2Q9H3C7 697 aa15.56■□□□□ 0.08
IFT88-202ENST00000351808 MBIPQ9NS73 344 aa15.56■□□□□ 0.08
IFT88-202ENST00000351808 BCCIPQ9P287 314 aaKnown RBP eCLIP15.56■□□□□ 0.08
IFT88-202ENST00000351808 FAM135BQ49AJ0 1406 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 CPA1P15085 419 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 HSPA4P34932 840 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 KRT85P78386 507 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 MNS1Q8NEH6 495 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 IL17RAQ96F46 866 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 MEIS3Q99687 375 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 ARHGEF40Q8TER5 1519 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 IQCB1Q15051 598 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 CC2D1AQ6P1N0 951 aaPredicted RBP15.55■□□□□ 0.08
IFT88-202ENST00000351808 LEKR1Q6ZMV7 388 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 TTC14Q96N46 770 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 CLSTN2Q9H4D0 955 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 PSD3Q9NYI0 1048 aa15.55■□□□□ 0.08
IFT88-202ENST00000351808 SARM1Q6SZW1 724 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 CARD10Q9BWT7 1032 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 KCND1Q9NSA2 647 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 TFIP11Q9UBB9 837 aaKnown RBP15.54■□□□□ 0.08
IFT88-202ENST00000351808 NR1I2O75469 434 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 RBM43Q6ZSC3 357 aaKnown RBP15.54■□□□□ 0.08
IFT88-202ENST00000351808 CCDC91Q7Z6B0 441 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 UNC5CLQ8IV45 518 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 SBNO2Q9Y2G9 1366 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 PRKAR2BP31323 418 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 HOMER1Q86YM7 354 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 DDX19AQ9NUU7 478 aaKnown RBP15.54■□□□□ 0.08
IFT88-202ENST00000351808 DNAI1Q9UI46 699 aa15.54■□□□□ 0.08
IFT88-202ENST00000351808 H3BQF6 201 aa15.53■□□□□ 0.08
IFT88-202ENST00000351808 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
IFT88-202ENST00000351808 TADA3O75528 432 aa15.53■□□□□ 0.08
IFT88-202ENST00000351808 IVLP07476 585 aa15.53■□□□□ 0.08
IFT88-202ENST00000351808 C11orf57Q6ZUT1 292 aaPredicted RBP15.53■□□□□ 0.08
IFT88-202ENST00000351808 DONSONQ9NYP3 566 aa15.53■□□□□ 0.08
IFT88-202ENST00000351808 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
IFT88-202ENST00000351808 KIF24Q5T7B8 1368 aa15.52■□□□□ 0.08
IFT88-202ENST00000351808 PATL2C9JE40 543 aaKnown RBP15.52■□□□□ 0.08
IFT88-202ENST00000351808 GNAI3P08754 354 aa15.52■□□□□ 0.08
IFT88-202ENST00000351808 DNAJC21Q5F1R6 531 aaKnown RBP15.52■□□□□ 0.08
IFT88-202ENST00000351808 RASEFQ8IZ41 740 aa15.52■□□□□ 0.08
IFT88-202ENST00000351808 PDRG1Q9NUG6 133 aa15.52■□□□□ 0.08
IFT88-202ENST00000351808 EVCP57679 992 aa15.52■□□□□ 0.07
IFT88-202ENST00000351808 GNAI1P63096 354 aa15.52■□□□□ 0.07
IFT88-202ENST00000351808 PPM1EQ8WY54 764 aa15.52■□□□□ 0.07
IFT88-202ENST00000351808 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
IFT88-202ENST00000351808 CCDC158Q5M9N0 1113 aa15.51■□□□□ 0.07
IFT88-202ENST00000351808 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
IFT88-202ENST00000351808 ATP10BO94823 1461 aa15.51■□□□□ 0.07
IFT88-202ENST00000351808 SYCP2Q9BX26 1530 aa15.51■□□□□ 0.07
IFT88-202ENST00000351808 A0A087WWV3 80 aa15.51■□□□□ 0.07
IFT88-202ENST00000351808 GSCP56915 257 aaPredicted RBP15.51■□□□□ 0.07
IFT88-202ENST00000351808 PHACTR3Q96KR7 559 aa15.51■□□□□ 0.07
IFT88-202ENST00000351808 SUFUQ9UMX1 484 aa15.51■□□□□ 0.07
IFT88-202ENST00000351808 BECN2A8MW95 431 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 MCTP2Q6DN12 878 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 SPATA32Q96LK8 384 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 FUT8Q9BYC5 575 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 ARFGAP3Q9NP61 516 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 TTC21BQ7Z4L5 1316 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 CDC37L1Q7L3B6 337 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 SUGP1Q8IWZ8 645 aaKnown RBP15.5■□□□□ 0.07
IFT88-202ENST00000351808 BICD2Q8TD16 824 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 COL3A1P02461 1466 aaPredicted RBP15.5■□□□□ 0.07
IFT88-202ENST00000351808 EFCAB8A8MWE9 144 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 ETF1P62495 437 aaKnown RBP15.5■□□□□ 0.07
IFT88-202ENST00000351808 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
IFT88-202ENST00000351808 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 VPS18Q9P253 973 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 MSH6P52701 1360 aa15.5■□□□□ 0.07
IFT88-202ENST00000351808 KIAA1210Q9ULL0 1709 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms