RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 BLOC1S2Q6QNY1 142 aa14.48□□□□□ -0.09
SMAD9-201ENST00000350148 SMARCA5O60264 1052 aaPredicted RBP14.48□□□□□ -0.09
SMAD9-201ENST00000350148 TTF1Q15361 905 aaPredicted RBP14.48□□□□□ -0.09
SMAD9-201ENST00000350148 ADAMTS13Q76LX8 1427 aa14.47□□□□□ -0.09
SMAD9-201ENST00000350148 DRC7Q8IY82 874 aa14.47□□□□□ -0.09
SMAD9-201ENST00000350148 HMGB1P09429 215 aaKnown RBP14.47□□□□□ -0.09
SMAD9-201ENST00000350148 ZBTB3Q9H5J0 574 aa14.47□□□□□ -0.09
SMAD9-201ENST00000350148 BTG4Q9NY30 223 aa14.47□□□□□ -0.09
SMAD9-201ENST00000350148 HOOK1Q9UJC3 728 aaKnown RBP14.47□□□□□ -0.09
SMAD9-201ENST00000350148 NCAPD2Q15021 1401 aa14.47□□□□□ -0.09
SMAD9-201ENST00000350148 MCTP1Q6DN14 999 aa14.47□□□□□ -0.09
SMAD9-201ENST00000350148 ABCC4O15439 1325 aa14.46□□□□□ -0.09
SMAD9-201ENST00000350148 WDR33Q9C0J8 1336 aaKnown RBP14.46□□□□□ -0.09
SMAD9-201ENST00000350148 LETM1O95202 739 aaPredicted RBP14.46□□□□□ -0.09
SMAD9-201ENST00000350148 EIF4A1P60842 406 aaKnown RBP14.46□□□□□ -0.09
SMAD9-201ENST00000350148 KIAA2012Q0VF49 1180 aa14.46□□□□□ -0.09
SMAD9-201ENST00000350148 SLC39A6Q13433 755 aa14.46□□□□□ -0.09
SMAD9-201ENST00000350148 UBE3BQ7Z3V4 1068 aa14.46□□□□□ -0.09
SMAD9-201ENST00000350148 IL15P40933 162 aaPredicted RBP14.46□□□□□ -0.09
SMAD9-201ENST00000350148 BRMS1Q9HCU9 246 aa14.46□□□□□ -0.09
SMAD9-201ENST00000350148 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
SMAD9-201ENST00000350148 AOX1Q06278 1338 aa14.46□□□□□ -0.09
SMAD9-201ENST00000350148 CWC27Q6UX04 472 aaKnown RBP14.46□□□□□ -0.09
SMAD9-201ENST00000350148 VPS37CA5D8V6 355 aaPredicted RBP14.46□□□□□ -0.1
SMAD9-201ENST00000350148 PLBD2Q8NHP8 589 aa14.46□□□□□ -0.1
SMAD9-201ENST00000350148 CAVIN4Q5BKX8 364 aa14.45□□□□□ -0.1
SMAD9-201ENST00000350148 KDM2BQ8NHM5 1336 aa14.45□□□□□ -0.1
SMAD9-201ENST00000350148 UQCRFS1P1P0C7P4 283 aa14.45□□□□□ -0.1
SMAD9-201ENST00000350148 SETQ01105 290 aaPredicted RBP14.45□□□□□ -0.1
SMAD9-201ENST00000350148 PDRG1Q9NUG6 133 aa14.45□□□□□ -0.1
SMAD9-201ENST00000350148 FKBP4Q02790 459 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMAD9-201ENST00000350148 ZNF853P0CG23 659 aa14.45□□□□□ -0.1
SMAD9-201ENST00000350148 FAM43AQ8N2R8 423 aa14.45□□□□□ -0.1
SMAD9-201ENST00000350148 SH2B1Q9NRF2 756 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-201ENST00000350148 TBC1D9Q6ZT07 1266 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 TBC1D32Q96NH3 1257 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-201ENST00000350148 CEP170BQ9Y4F5 1589 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-201ENST00000350148 PDE1AP54750 535 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 IMMTQ16891 758 aaKnown RBP14.44□□□□□ -0.1
SMAD9-201ENST00000350148 CCDC152Q4G0S7 254 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 FOXD4L5Q5VV16 416 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-201ENST00000350148 FOXD4L4Q8WXT5 416 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-201ENST00000350148 METTL22Q9BUU2 404 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-201ENST00000350148 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 PTPRUQ92729 1446 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 CDKL5O76039 1030 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 PHKG2P15735 406 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 MROH2AA6NES4 1674 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 HMG20BQ9P0W2 317 aa14.44□□□□□ -0.1
SMAD9-201ENST00000350148 ANAPC15P60006 121 aa14.43□□□□□ -0.1
SMAD9-201ENST00000350148 NCOA3Q9Y6Q9 1424 aa14.43□□□□□ -0.1
SMAD9-201ENST00000350148 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-201ENST00000350148 ZNF396Q96N95 335 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-201ENST00000350148 MAP3K12Q12852 859 aa14.43□□□□□ -0.1
SMAD9-201ENST00000350148 AK7Q96M32 723 aa14.43□□□□□ -0.1
SMAD9-201ENST00000350148 MYO3AQ8NEV4 1616 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 MAP4K4O95819 1239 aaPredicted RBP14.42□□□□□ -0.1
SMAD9-201ENST00000350148 NYXQ9GZU5 481 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 ATP6V1AP38606 617 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 RASSF8Q8NHQ8 419 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 KRT24Q2M2I5 525 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 IL17REQ8NFR9 667 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 FBXW7Q969H0 707 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 JAKMIP1Q96N16 626 aaKnown RBP14.42□□□□□ -0.1
SMAD9-201ENST00000350148 BOLA2Q9H3K6 86 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 LGR6Q9HBX8 967 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 ATP5J2-PTCD1G3V325 749 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 ANXA1P04083 346 aa14.42□□□□□ -0.1
SMAD9-201ENST00000350148 CCDC73Q6ZRK6 1079 aa14.41□□□□□ -0.1
SMAD9-201ENST00000350148 CCDC191Q8NCU4 936 aa14.41□□□□□ -0.1
SMAD9-201ENST00000350148 LDHAL6AQ6ZMR3 332 aa14.41□□□□□ -0.1
SMAD9-201ENST00000350148 CCDC8Q9H0W5 538 aaPredicted RBP14.41□□□□□ -0.1
SMAD9-201ENST00000350148 PARP10Q53GL7 1025 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 AIDAQ96BJ3 306 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 LRP2BPQ9P2M1 347 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 MARCH6O60337 910 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 CCDC47Q96A33 483 aaKnown RBP14.4□□□□□ -0.1
SMAD9-201ENST00000350148 TNNQ9UQP3 1299 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 SPATA31A3Q5VYP0 1347 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 USP19O94966 1318 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 WDR17Q8IZU2 1322 aa14.4□□□□□ -0.1
SMAD9-201ENST00000350148 BICD2Q8TD16 824 aa14.4□□□□□ -0.11
SMAD9-201ENST00000350148 UTP14AQ9BVJ6 771 aaKnown RBP14.4□□□□□ -0.11
SMAD9-201ENST00000350148 ZNF287Q9HBT7 754 aa14.4□□□□□ -0.11
SMAD9-201ENST00000350148 ERBB3P21860 1342 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 RAD50Q92878 1312 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 SLF2Q8IX21 1173 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 C8orf37Q96NL8 207 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 SDSP20132 328 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 DZIP3Q86Y13 1208 aaKnown RBP14.39□□□□□ -0.11
SMAD9-201ENST00000350148 GOLGA6L1Q8N7Z2 621 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 RAI14Q9P0K7 980 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 G2E3Q7L622 706 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 TRIM22Q8IYM9 498 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 WASF1Q92558 559 aa14.39□□□□□ -0.11
SMAD9-201ENST00000350148 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
SMAD9-201ENST00000350148 GOLGA6L19H0YKK7 550 aa14.38□□□□□ -0.11
SMAD9-201ENST00000350148 EPB41L2O43491 1005 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms