RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 F6X3S4 739 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 SLF2Q8IX21 1173 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 ASAP3Q8TDY4 903 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 CNNM1Q9NRU3 951 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 RABGAP1Q9Y3P9 1069 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 PEG3Q9GZU2 1588 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 SNUPNO95149 360 aaKnown RBP7.09□□□□□ -1.27
RFC1-201ENST00000349703 MCCP23508 829 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 PNISRQ8TF01 805 aaKnown RBP7.09□□□□□ -1.27
RFC1-201ENST00000349703 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 COMMD10Q9Y6G5 202 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 PTPN23Q9H3S7 1636 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 ADCY1Q08828 1119 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 PLA2G4EQ3MJ16 856 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 ARHGAP29Q52LW3 1261 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 CCDC184Q52MB2 194 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 GTF3C2Q8WUA4 911 aaPredicted RBP7.09□□□□□ -1.27
RFC1-201ENST00000349703 PPM1EQ8WY54 764 aa7.09□□□□□ -1.27
RFC1-201ENST00000349703 PPP4CP60510 307 aa7.09□□□□□ -1.28
RFC1-201ENST00000349703 PDCD2Q16342 344 aaPredicted RBP7.09□□□□□ -1.28
RFC1-201ENST00000349703 KCNK17Q96T54 332 aa7.09□□□□□ -1.28
RFC1-201ENST00000349703 ASCC2Q9H1I8 757 aaPredicted RBP7.09□□□□□ -1.28
RFC1-201ENST00000349703 CHMP5Q9NZZ3 219 aa7.09□□□□□ -1.28
RFC1-201ENST00000349703 GABBR1Q9UBS5 961 aa7.09□□□□□ -1.28
RFC1-201ENST00000349703 RCCD1A6NED2 376 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 FKBP4Q02790 459 aaKnown RBP eCLIP7.08□□□□□ -1.28
RFC1-201ENST00000349703 GNASQ5JWF2 1037 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 TBC1D9Q6ZT07 1266 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 DDX54Q8TDD1 881 aaKnown RBP7.08□□□□□ -1.28
RFC1-201ENST00000349703 PRR14Q9BWN1 585 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 CFAP43Q8NDM7 1665 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 NOM1Q5C9Z4 860 aaKnown RBP7.08□□□□□ -1.28
RFC1-201ENST00000349703 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 HOMER2Q9NSB8 354 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 SH3BGRP55822 239 aaPredicted RBP7.08□□□□□ -1.28
RFC1-201ENST00000349703 CTDSPL2Q05D32 466 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 ZFYVE27Q5T4F4 411 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 CC2D2BQ6DHV5 1058 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 GGT6Q6P531 493 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 CREBRFQ8IUR6 639 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 ZDHHC16Q969W1 377 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 FEZ1Q99689 392 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 CDCA7Q9BWT1 371 aaPredicted RBP7.08□□□□□ -1.28
RFC1-201ENST00000349703 RAD18Q9NS91 495 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 KNSTRNQ9Y448 316 aa7.08□□□□□ -1.28
RFC1-201ENST00000349703 TLR3O15455 904 aaKnown RBP7.07□□□□□ -1.28
RFC1-201ENST00000349703 FLT3P36888 993 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 NCAPG2Q86XI2 1143 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 CGNL1Q0VF96 1302 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 K7ELQ4 463 aaPredicted RBP7.07□□□□□ -1.28
RFC1-201ENST00000349703 EPB42P16452 691 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 LEO1Q8WVC0 666 aaPredicted RBP7.07□□□□□ -1.28
RFC1-201ENST00000349703 PDCL3Q9H2J4 239 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 FGD5Q6ZNL6 1462 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 EHBP1L1Q8N3D4 1523 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 OPLAHO14841 1288 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 PHACTR2O75167 634 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 ZNF16P17020 682 aaPredicted RBP7.07□□□□□ -1.28
RFC1-201ENST00000349703 ERBB3P21860 1342 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 NAIPQ13075 1403 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 TRIM5Q9C035 493 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 TRIM17Q9Y577 477 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 SENP3-EIF4A1A0A087X0R7 540 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 CFHP08603 1231 aa7.07□□□□□ -1.28
RFC1-201ENST00000349703 CCDC85BQ15834 202 aaPredicted RBP7.07□□□□□ -1.28
RFC1-201ENST00000349703 RWDD1Q9H446 243 aaPredicted RBP7.07□□□□□ -1.28
RFC1-201ENST00000349703 LRCH2Q5VUJ6 765 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 FMNL3Q8IVF7 1028 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 PROM2Q8N271 834 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 NGEFQ8N5V2 710 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 ABTB2Q8N961 1025 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 PUF60Q9UHX1 559 aaKnown RBP7.06□□□□□ -1.28
RFC1-201ENST00000349703 IGF1RP08069 1367 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 ATP9BO43861 1147 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 MLLT1Q03111 559 aaPredicted RBP7.06□□□□□ -1.28
RFC1-201ENST00000349703 DZIP1Q86YF9 867 aaKnown RBP7.06□□□□□ -1.28
RFC1-201ENST00000349703 ZNF654Q8IZM8 581 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 SPON2Q9BUD6 331 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 PCF11O94913 1555 aaKnown RBP7.06□□□□□ -1.28
RFC1-201ENST00000349703 NINLQ9Y2I6 1382 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 KRT37O76014 449 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 GPR152Q8TDT2 470 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 CREBZFQ9NS37 354 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 NOB1Q9ULX3 412 aaKnown RBP7.06□□□□□ -1.28
RFC1-201ENST00000349703 PCDHGB7Q9Y5F8 929 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 SNX13Q9Y5W8 968 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 TMF1P82094 1093 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 ZKSCAN5Q9Y2L8 839 aa7.06□□□□□ -1.28
RFC1-201ENST00000349703 TATP17735 454 aaPredicted RBP7.05□□□□□ -1.28
RFC1-201ENST00000349703 AMHR2Q16671 573 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 CCDC144BQ3MJ40 725 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 DNTTIP2Q5QJE6 756 aaKnown RBP7.05□□□□□ -1.28
RFC1-201ENST00000349703 FAM117BQ6P1L5 589 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 NCAPD3P42695 1498 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 SUPT6HQ7KZ85 1726 aaKnown RBP7.05□□□□□ -1.28
RFC1-201ENST00000349703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.05□□□□□ -1.28
RFC1-201ENST00000349703 PDIA6Q15084 440 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 APOBRQ0VD83 1088 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms