RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ANKARQ7Z5J8 1434 aa21.78■■□□□ 1.08
PTP4A3-202ENST00000349124 CCDC8Q9H0W5 538 aaPredicted RBP21.78■■□□□ 1.08
PTP4A3-202ENST00000349124 DBF4Q9UBU7 674 aaPredicted RBP21.78■■□□□ 1.08
PTP4A3-202ENST00000349124 RNMTO43148 476 aaKnown RBP21.77■■□□□ 1.08
PTP4A3-202ENST00000349124 GIGYF1O75420 1035 aaPredicted RBP21.77■■□□□ 1.08
PTP4A3-202ENST00000349124 NECAB1Q8N987 351 aa21.77■■□□□ 1.08
PTP4A3-202ENST00000349124 FAM227BQ96M60 508 aa21.77■■□□□ 1.08
PTP4A3-202ENST00000349124 SMC3Q9UQE7 1217 aa21.77■■□□□ 1.08
PTP4A3-202ENST00000349124 ZNF500O60304 480 aaPredicted RBP21.77■■□□□ 1.07
PTP4A3-202ENST00000349124 AACSQ86V21 672 aa21.77■■□□□ 1.07
PTP4A3-202ENST00000349124 KLHDC4Q8TBB5 520 aa21.77■■□□□ 1.07
PTP4A3-202ENST00000349124 ZNF830Q96NB3 372 aaPredicted RBP21.77■■□□□ 1.07
PTP4A3-202ENST00000349124 ECHDC1Q9NTX5 307 aa21.77■■□□□ 1.07
PTP4A3-202ENST00000349124 MARF1Q9Y4F3 1742 aaKnown RBP21.76■■□□□ 1.07
PTP4A3-202ENST00000349124 IFIT2P09913 472 aaKnown RBP21.76■■□□□ 1.07
PTP4A3-202ENST00000349124 RBM10P98175 930 aaKnown RBP21.76■■□□□ 1.07
PTP4A3-202ENST00000349124 KAZALD1Q96I82 304 aa21.76■■□□□ 1.07
PTP4A3-202ENST00000349124 PLEKHO1Q53GL0 409 aaPredicted RBP21.76■■□□□ 1.07
PTP4A3-202ENST00000349124 HSP90AB4PQ58FF6 505 aa21.76■■□□□ 1.07
PTP4A3-202ENST00000349124 EPB41L2O43491 1005 aaKnown RBP21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 HOXB7P09629 217 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 SUCLG2Q96I99 432 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 TCEANC2Q96MN5 208 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 SIL1Q9H173 461 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 PDRG1Q9NUG6 133 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 TLR7Q9NYK1 1049 aaKnown RBP21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 TPM2P07951 284 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 GJB2P29033 226 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 ST3GAL1Q11201 340 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 ORAI2Q96SN7 254 aa21.75■■□□□ 1.07
PTP4A3-202ENST00000349124 SASH1O94885 1247 aa21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 KSR2Q6VAB6 950 aa21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 EAF2Q96CJ1 260 aaPredicted RBP21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 TCHHQ07283 1943 aa21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 PTMAP06454 111 aaKnown RBP21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 DNM1Q05193 864 aaKnown RBP21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 USP25Q9UHP3 1055 aa21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 TAF6LQ9Y6J9 622 aa21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 TTC41PQ6P2S7 1318 aa21.74■■□□□ 1.07
PTP4A3-202ENST00000349124 RRP9O43818 475 aaKnown RBP21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 F13A1P00488 732 aa21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 MTX1Q13505 466 aa21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 JARID2Q92833 1246 aaPredicted RBP21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 USP42Q9H9J4 1324 aaKnown RBP21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 GCP02774 474 aa21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 HCLS1P14317 486 aaPredicted RBP21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 C1orf141Q5JVX7 400 aa21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 BICC1Q9H694 974 aaKnown RBP21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 CCDC39Q9UFE4 941 aa21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.73■■□□□ 1.07
PTP4A3-202ENST00000349124 SLC39A6Q13433 755 aa21.72■■□□□ 1.07
PTP4A3-202ENST00000349124 ME3Q16798 604 aa21.72■■□□□ 1.07
PTP4A3-202ENST00000349124 BOLA2Q9H3K6 86 aa21.72■■□□□ 1.07
PTP4A3-202ENST00000349124 GIMAP6Q6P9H5 292 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 PXDNQ92626 1479 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 NECTIN1Q15223 517 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 FAM173BQ6P4H8 233 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 MTMR6Q9Y217 621 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 CACNA1FO60840 1977 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 NMIQ13287 307 aaPredicted RBP21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 TMEM87AQ8NBN3 555 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 EDC3Q96F86 508 aaKnown RBP21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 ZSWIM6Q9HCJ5 1215 aa21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 RBM8AQ9Y5S9 174 aaKnown RBP21.71■■□□□ 1.07
PTP4A3-202ENST00000349124 CCDC183Q5T5S1 534 aa21.7■■□□□ 1.06
PTP4A3-202ENST00000349124 ANKRD24Q8TF21 1146 aa21.7■■□□□ 1.06
PTP4A3-202ENST00000349124 RUFY2Q8WXA3 655 aa21.7■■□□□ 1.06
PTP4A3-202ENST00000349124 VPS37CA5D8V6 355 aaPredicted RBP21.7■■□□□ 1.06
PTP4A3-202ENST00000349124 TPCN1Q9ULQ1 816 aa21.7■■□□□ 1.06
PTP4A3-202ENST00000349124 CYP46A1Q9Y6A2 500 aa21.7■■□□□ 1.06
PTP4A3-202ENST00000349124 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 KCNJ4P48050 445 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 PIP4K2AP48426 406 aaPredicted RBP21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 CHMP3Q9Y3E7 222 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 GRM8O00222 908 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 MYL6BP14649 208 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 UBE2HP62256 183 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 CREB3L3Q68CJ9 461 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 FERMT3Q86UX7 667 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 ARHGEF25Q86VW2 580 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 KCNH5Q8NCM2 988 aa21.69■■□□□ 1.06
PTP4A3-202ENST00000349124 PHF14O94880 888 aa21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 VPS53Q5VIR6 699 aa21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 EVI5LQ96CN4 794 aa21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 CCDC171Q6TFL3 1326 aa21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 A0A0D9SFI3 127 aa21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 PLCB2Q00722 1185 aa21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 C17orf53Q8N3J3 647 aaPredicted RBP21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 NDUFB9Q9Y6M9 179 aa21.68■■□□□ 1.06
PTP4A3-202ENST00000349124 CHGBP05060 677 aa21.67■■□□□ 1.06
PTP4A3-202ENST00000349124 IGKV5-2P06315 115 aa21.67■■□□□ 1.06
PTP4A3-202ENST00000349124 G3BP1Q13283 466 aaKnown RBP eCLIP21.67■■□□□ 1.06
PTP4A3-202ENST00000349124 PDIA6Q15084 440 aa21.67■■□□□ 1.06
PTP4A3-202ENST00000349124 EPHA10Q5JZY3 1008 aa21.67■■□□□ 1.06
PTP4A3-202ENST00000349124 NFAT5O94916 1531 aa21.66■■□□□ 1.06
PTP4A3-202ENST00000349124 AMOTQ4VCS5 1084 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms