RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 SULT6B1Q6IMI4 303 aa6.65□□□□□ -1.34
VCAM1-202ENST00000347652 DEFB132Q7Z7B7 95 aa6.65□□□□□ -1.34
VCAM1-202ENST00000347652 TRIM37O94972 964 aa6.65□□□□□ -1.35
VCAM1-202ENST00000347652 PNNQ9H307 717 aaKnown RBP6.65□□□□□ -1.35
VCAM1-202ENST00000347652 VRTNQ9H8Y1 702 aa6.65□□□□□ -1.35
VCAM1-202ENST00000347652 ANO8Q9HCE9 1232 aaPredicted RBP6.65□□□□□ -1.35
VCAM1-202ENST00000347652 GABBR1Q9UBS5 961 aa6.65□□□□□ -1.35
VCAM1-202ENST00000347652 ABL2P42684 1182 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 TNS2Q63HR2 1409 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 KAT6BQ8WYB5 2073 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 EXOC5O00471 708 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 RECKO95980 971 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 CCDC146Q8IYE0 955 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 DDX54Q8TDD1 881 aaKnown RBP6.64□□□□□ -1.35
VCAM1-202ENST00000347652 RUNDC1Q96C34 613 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 SBF2Q86WG5 1849 aa6.64□□□□□ -1.35
VCAM1-202ENST00000347652 KCNQ2O43526 872 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 PRKAR2BP31323 418 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 ACSBG1Q96GR2 724 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 TBC1D2Q9BYX2 928 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 TNS1Q9HBL0 1735 aaKnown RBP6.63□□□□□ -1.35
VCAM1-202ENST00000347652 MAP2K5Q13163 448 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 OS9Q13438 667 aaPredicted RBP6.63□□□□□ -1.35
VCAM1-202ENST00000347652 SH3D19Q5HYK7 790 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 ZNF467Q7Z7K2 595 aaPredicted RBP6.63□□□□□ -1.35
VCAM1-202ENST00000347652 MTMR14Q8NCE2 650 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 OVOS2A0A0G2JMS6 1433 aa6.63□□□□□ -1.35
VCAM1-202ENST00000347652 SCNN1AP37088 669 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 WWC1Q8IX03 1113 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 TBC1D2BQ9UPU7 963 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 PLEKHG2Q9H7P9 1386 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 SPDYE2BA6NHP3 402 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 SPDYE5A6NIY4 337 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 APAF1O14727 1248 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 CYP27B1O15528 508 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 PPFIA4O75335 1185 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 SPDYE6P0CI01 402 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 EN1Q05925 392 aaPredicted RBP6.62□□□□□ -1.35
VCAM1-202ENST00000347652 SPDYE2Q495Y8 402 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 FAM196AQ6ZSG2 479 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 ZCRB1Q8TBF4 217 aaKnown RBP6.62□□□□□ -1.35
VCAM1-202ENST00000347652 RAPGEF4Q8WZA2 1011 aa6.62□□□□□ -1.35
VCAM1-202ENST00000347652 MAPK8IP3Q9UPT6 1336 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 TATP17735 454 aaPredicted RBP6.61□□□□□ -1.35
VCAM1-202ENST00000347652 SETQ01105 290 aaPredicted RBP6.61□□□□□ -1.35
VCAM1-202ENST00000347652 FOXD4Q12950 439 aaPredicted RBP6.61□□□□□ -1.35
VCAM1-202ENST00000347652 LARGE2Q8N3Y3 721 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 LNPKQ9C0E8 428 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 KCNG1Q9UIX4 513 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 NEFMP07197 916 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 TMPOP42166 694 aaKnown RBP6.61□□□□□ -1.35
VCAM1-202ENST00000347652 NFE2L2Q16236 605 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 MTHFSDQ2M296 383 aaKnown RBP6.61□□□□□ -1.35
VCAM1-202ENST00000347652 PKD1L3Q7Z443 1732 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 DOT1LQ8TEK3 1739 aa6.61□□□□□ -1.35
VCAM1-202ENST00000347652 PAX3P23760 479 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 EZH2Q15910 746 aaKnown RBP6.6□□□□□ -1.35
VCAM1-202ENST00000347652 AMOTQ4VCS5 1084 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 PLEKHO1Q53GL0 409 aaPredicted RBP6.6□□□□□ -1.35
VCAM1-202ENST00000347652 RASEFQ8IZ41 740 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 NLGN1Q8N2Q7 840 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 NME8Q8N427 588 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 PMM1Q92871 262 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 TOGARAM1Q9Y4F4 1720 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 APBA3O96018 575 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 PTMSP20962 102 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 HNRNPUQ00839 825 aaKnown RBP eCLIP6.6□□□□□ -1.35
VCAM1-202ENST00000347652 NGEFQ8N5V2 710 aa6.6□□□□□ -1.35
VCAM1-202ENST00000347652 SENP3-EIF4A1A0A087X0R7 540 aa6.59□□□□□ -1.35
VCAM1-202ENST00000347652 PRIM1P49642 420 aaKnown RBP6.59□□□□□ -1.35
VCAM1-202ENST00000347652 RIPK4P57078 832 aa6.59□□□□□ -1.35
VCAM1-202ENST00000347652 GAS2L2Q8NHY3 880 aa6.59□□□□□ -1.35
VCAM1-202ENST00000347652 SYTL4Q96C24 671 aaPredicted RBP6.59□□□□□ -1.35
VCAM1-202ENST00000347652 YTHDC1Q96MU7 727 aaKnown RBP6.59□□□□□ -1.35
VCAM1-202ENST00000347652 RRP7AQ9Y3A4 280 aaKnown RBP6.59□□□□□ -1.35
VCAM1-202ENST00000347652 KCNQ4P56696 695 aa6.59□□□□□ -1.35
VCAM1-202ENST00000347652 TRIM35Q9UPQ4 493 aa6.59□□□□□ -1.35
VCAM1-202ENST00000347652 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
VCAM1-202ENST00000347652 BTAF1O14981 1849 aa6.59□□□□□ -1.35
VCAM1-202ENST00000347652 NHSQ6T4R5 1651 aa6.59□□□□□ -1.36
VCAM1-202ENST00000347652 SF3B2Q13435 895 aaKnown RBP6.58□□□□□ -1.36
VCAM1-202ENST00000347652 AKAP4Q5JQC9 854 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 PHLDB3Q6NSJ2 640 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 PIF1Q9H611 641 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 HTATSF1O43719 755 aaKnown RBP6.58□□□□□ -1.36
VCAM1-202ENST00000347652 HDGFL1Q5TGJ6 251 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
VCAM1-202ENST00000347652 CAMKK2Q96RR4 588 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 PNMA2Q9UL42 364 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 FARP1Q9Y4F1 1045 aaPredicted RBP6.58□□□□□ -1.36
VCAM1-202ENST00000347652 ZBED9Q6R2W3 1325 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 ZNF521Q96K83 1311 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 PCDH11XQ9BZA7 1347 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 PCDH11YQ9BZA8 1340 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 BCL9O00512 1426 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 GNAT3A8MTJ3 354 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 DPYSL4O14531 572 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 C7P10643 843 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 PHKG2P15735 406 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms