RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CCDC27Q2M243 656 aa20.45■□□□□ 0.86
TSPAN4-201ENST00000346501 DALRD3Q5D0E6 543 aaKnown RBP20.45■□□□□ 0.86
TSPAN4-201ENST00000346501 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
TSPAN4-201ENST00000346501 FAM9BQ8IZU0 186 aa20.45■□□□□ 0.86
TSPAN4-201ENST00000346501 MAP3K15Q6ZN16 1313 aa20.45■□□□□ 0.86
TSPAN4-201ENST00000346501 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-201ENST00000346501 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
TSPAN4-201ENST00000346501 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
TSPAN4-201ENST00000346501 BRIP1Q9BX63 1249 aa20.44■□□□□ 0.86
TSPAN4-201ENST00000346501 MBIPQ9NS73 344 aa20.44■□□□□ 0.86
TSPAN4-201ENST00000346501 C2CD5Q86YS7 1000 aa20.43■□□□□ 0.86
TSPAN4-201ENST00000346501 N4BP2Q86UW6 1770 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-201ENST00000346501 CHRNA5P30532 468 aa20.42■□□□□ 0.86
TSPAN4-201ENST00000346501 PRR5LQ6MZQ0 368 aa20.42■□□□□ 0.86
TSPAN4-201ENST00000346501 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
TSPAN4-201ENST00000346501 ZBTB3Q9H5J0 574 aa20.42■□□□□ 0.86
TSPAN4-201ENST00000346501 DDX21Q9NR30 783 aaKnown RBP eCLIP20.42■□□□□ 0.86
TSPAN4-201ENST00000346501 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
TSPAN4-201ENST00000346501 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
TSPAN4-201ENST00000346501 DUSP27Q5VZP5 1158 aa20.41■□□□□ 0.86
TSPAN4-201ENST00000346501 DBF4Q9UBU7 674 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-201ENST00000346501 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-201ENST00000346501 TTLL7Q6ZT98 887 aa20.4■□□□□ 0.86
TSPAN4-201ENST00000346501 ARHGAP27Q6ZUM4 889 aa20.4■□□□□ 0.86
TSPAN4-201ENST00000346501 WWC1Q8IX03 1113 aa20.4■□□□□ 0.86
TSPAN4-201ENST00000346501 NRXN2Q9P2S2 1712 aa20.39■□□□□ 0.86
TSPAN4-201ENST00000346501 FAM177BA6PVY3 158 aa20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 KCNA3P22001 575 aa20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 HLFQ16534 295 aa20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 HSP90AB3PQ58FF7 597 aa20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 TTLL6Q8N841 843 aa20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 ZNF622Q969S3 477 aaKnown RBP eCLIP20.39■□□□□ 0.85
TSPAN4-201ENST00000346501 IL16Q14005 1332 aa20.38■□□□□ 0.85
TSPAN4-201ENST00000346501 COPS6Q7L5N1 327 aa20.38■□□□□ 0.85
TSPAN4-201ENST00000346501 HYPKQ9NX55 129 aa20.38■□□□□ 0.85
TSPAN4-201ENST00000346501 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
TSPAN4-201ENST00000346501 ANXA1P04083 346 aa20.37■□□□□ 0.85
TSPAN4-201ENST00000346501 PDIA6Q15084 440 aa20.37■□□□□ 0.85
TSPAN4-201ENST00000346501 PARP10Q53GL7 1025 aa20.37■□□□□ 0.85
TSPAN4-201ENST00000346501 PPP1R42Q7Z4L9 355 aa20.37■□□□□ 0.85
TSPAN4-201ENST00000346501 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-201ENST00000346501 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
TSPAN4-201ENST00000346501 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
TSPAN4-201ENST00000346501 CCDC24Q8N4L8 307 aa20.36■□□□□ 0.85
TSPAN4-201ENST00000346501 XAGE3Q8WTP9 111 aa20.36■□□□□ 0.85
TSPAN4-201ENST00000346501 CNKSR1Q969H4 720 aa20.36■□□□□ 0.85
TSPAN4-201ENST00000346501 KIAA1551Q9HCM1 1747 aa20.36■□□□□ 0.85
TSPAN4-201ENST00000346501 ATP10DQ9P241 1426 aa20.36■□□□□ 0.85
TSPAN4-201ENST00000346501 GPTP24298 496 aa20.35■□□□□ 0.85
TSPAN4-201ENST00000346501 PROSER3Q2NL68 480 aa20.35■□□□□ 0.85
TSPAN4-201ENST00000346501 CCDC30Q5VVM6 783 aa20.35■□□□□ 0.85
TSPAN4-201ENST00000346501 WDR63Q8IWG1 891 aa20.35■□□□□ 0.85
TSPAN4-201ENST00000346501 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-201ENST00000346501 MASTLQ96GX5 879 aa20.34■□□□□ 0.85
TSPAN4-201ENST00000346501 STYK1Q6J9G0 422 aa20.33■□□□□ 0.85
TSPAN4-201ENST00000346501 STK31Q9BXU1 1019 aa20.33■□□□□ 0.85
TSPAN4-201ENST00000346501 GOLGA2Q08379 1002 aa20.32■□□□□ 0.84
TSPAN4-201ENST00000346501 ANKRD13DQ6ZTN6 518 aa20.32■□□□□ 0.84
TSPAN4-201ENST00000346501 LRP10Q7Z4F1 713 aa20.32■□□□□ 0.84
TSPAN4-201ENST00000346501 ZNF34Q8IZ26 560 aa20.32■□□□□ 0.84
TSPAN4-201ENST00000346501 PLBD2Q8NHP8 589 aa20.32■□□□□ 0.84
TSPAN4-201ENST00000346501 TSR2Q969E8 191 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-201ENST00000346501 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
TSPAN4-201ENST00000346501 SRGNP10124 158 aa20.31■□□□□ 0.84
TSPAN4-201ENST00000346501 NPR1P16066 1061 aa20.31■□□□□ 0.84
TSPAN4-201ENST00000346501 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
TSPAN4-201ENST00000346501 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-201ENST00000346501 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
TSPAN4-201ENST00000346501 NUP98P52948 1817 aa20.31■□□□□ 0.84
TSPAN4-201ENST00000346501 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-201ENST00000346501 ARFGEF1Q9Y6D6 1849 aa20.3■□□□□ 0.84
TSPAN4-201ENST00000346501 CCER2I3L3R5 266 aa20.3■□□□□ 0.84
TSPAN4-201ENST00000346501 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-201ENST00000346501 C8orf58Q8NAV2 365 aa20.3■□□□□ 0.84
TSPAN4-201ENST00000346501 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
TSPAN4-201ENST00000346501 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
TSPAN4-201ENST00000346501 TCIRG1Q13488 830 aa20.29■□□□□ 0.84
TSPAN4-201ENST00000346501 TWISTNBQ3B726 338 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-201ENST00000346501 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
TSPAN4-201ENST00000346501 RIC3Q7Z5B4 369 aa20.29■□□□□ 0.84
TSPAN4-201ENST00000346501 NUTM1Q86Y26 1132 aa20.29■□□□□ 0.84
TSPAN4-201ENST00000346501 RPGRQ92834 1020 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-201ENST00000346501 UBN2Q6ZU65 1347 aa20.27■□□□□ 0.84
TSPAN4-201ENST00000346501 DLEC1Q9Y238 1755 aa20.27■□□□□ 0.84
TSPAN4-201ENST00000346501 ERFEQ4G0M1 354 aa20.27■□□□□ 0.84
TSPAN4-201ENST00000346501 NLRP3Q96P20 1036 aa20.27■□□□□ 0.84
TSPAN4-201ENST00000346501 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-201ENST00000346501 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
TSPAN4-201ENST00000346501 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-201ENST00000346501 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-201ENST00000346501 TMX4Q9H1E5 349 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-201ENST00000346501 GPBP1L1Q9HC44 474 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-201ENST00000346501 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-201ENST00000346501 C21orf2O43822 256 aa20.25■□□□□ 0.83
TSPAN4-201ENST00000346501 NTSR2O95665 410 aa20.25■□□□□ 0.83
TSPAN4-201ENST00000346501 C9orf131Q5VYM1 1079 aa20.25■□□□□ 0.83
TSPAN4-201ENST00000346501 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms