RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 LMNB1P20700 586 aa23.31■■□□□ 1.32
CKLF-202ENST00000345436 STYK1Q6J9G0 422 aa23.31■■□□□ 1.32
CKLF-202ENST00000345436 C16orf71Q8IYS4 520 aaPredicted RBP23.31■■□□□ 1.32
CKLF-202ENST00000345436 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
CKLF-202ENST00000345436 ZC3H4Q9UPT8 1303 aaKnown RBP23.31■■□□□ 1.32
CKLF-202ENST00000345436 SOGA3Q5TF21 947 aa23.3■■□□□ 1.32
CKLF-202ENST00000345436 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
CKLF-202ENST00000345436 MASTLQ96GX5 879 aa23.3■■□□□ 1.32
CKLF-202ENST00000345436 ARFGEF1Q9Y6D6 1849 aa23.3■■□□□ 1.32
CKLF-202ENST00000345436 BRCA1P38398 1863 aaKnown RBP23.3■■□□□ 1.32
CKLF-202ENST00000345436 AFDNP55196 1824 aaKnown RBP23.29■■□□□ 1.32
CKLF-202ENST00000345436 NYXQ9GZU5 481 aa23.29■■□□□ 1.32
CKLF-202ENST00000345436 SCN7AQ01118 1682 aa23.28■■□□□ 1.32
CKLF-202ENST00000345436 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
CKLF-202ENST00000345436 PRKRIP1Q9H875 184 aaPredicted RBP23.28■■□□□ 1.32
CKLF-202ENST00000345436 KIF3CO14782 793 aa23.27■■□□□ 1.32
CKLF-202ENST00000345436 TOMM70O94826 608 aa23.27■■□□□ 1.32
CKLF-202ENST00000345436 MYL6BP14649 208 aa23.27■■□□□ 1.32
CKLF-202ENST00000345436 CCDC24Q8N4L8 307 aa23.27■■□□□ 1.32
CKLF-202ENST00000345436 SRGNP10124 158 aa23.26■■□□□ 1.31
CKLF-202ENST00000345436 CCDC146Q8IYE0 955 aa23.26■■□□□ 1.31
CKLF-202ENST00000345436 MAP3K15Q6ZN16 1313 aa23.26■■□□□ 1.31
CKLF-202ENST00000345436 C21orf2O43822 256 aa23.25■■□□□ 1.31
CKLF-202ENST00000345436 NPR1P16066 1061 aa23.25■■□□□ 1.31
CKLF-202ENST00000345436 ADAMTS8Q9UP79 889 aa23.25■■□□□ 1.31
CKLF-202ENST00000345436 DLG5Q8TDM6 1919 aa23.23■■□□□ 1.31
CKLF-202ENST00000345436 FAM177BA6PVY3 158 aa23.23■■□□□ 1.31
CKLF-202ENST00000345436 HSPA6P17066 643 aa23.23■■□□□ 1.31
CKLF-202ENST00000345436 EIF2S2P20042 333 aaKnown RBP23.23■■□□□ 1.31
CKLF-202ENST00000345436 RASSF7Q02833 373 aa23.23■■□□□ 1.31
CKLF-202ENST00000345436 HLFQ16534 295 aa23.23■■□□□ 1.31
CKLF-202ENST00000345436 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
CKLF-202ENST00000345436 DPY19L2Q6NUT2 758 aa23.22■■□□□ 1.31
CKLF-202ENST00000345436 PRPF40BQ6NWY9 871 aaKnown RBP23.22■■□□□ 1.31
CKLF-202ENST00000345436 NMRK2Q9NPI5 230 aa23.22■■□□□ 1.31
CKLF-202ENST00000345436 ZNF219Q9P2Y4 722 aaPredicted RBP23.22■■□□□ 1.31
CKLF-202ENST00000345436 LAS1LQ9Y4W2 734 aaKnown RBP23.22■■□□□ 1.31
CKLF-202ENST00000345436 CALD1Q05682 793 aaKnown RBP23.21■■□□□ 1.31
CKLF-202ENST00000345436 KLRG2A4D1S0 409 aaPredicted RBP23.2■■□□□ 1.3
CKLF-202ENST00000345436 CHL1O00533 1208 aa23.2■■□□□ 1.3
CKLF-202ENST00000345436 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
CKLF-202ENST00000345436 TAOK3Q9H2K8 898 aa23.2■■□□□ 1.3
CKLF-202ENST00000345436 KDM3BQ7LBC6 1761 aa23.19■■□□□ 1.3
CKLF-202ENST00000345436 GIGYF2Q6Y7W6 1299 aaKnown RBP23.19■■□□□ 1.3
CKLF-202ENST00000345436 TTLL7Q6ZT98 887 aa23.19■■□□□ 1.3
CKLF-202ENST00000345436 RBM46Q8TBY0 533 aaKnown RBP23.19■■□□□ 1.3
CKLF-202ENST00000345436 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
CKLF-202ENST00000345436 BCORQ6W2J9 1755 aa23.19■■□□□ 1.3
CKLF-202ENST00000345436 LTBP3Q9NS15 1303 aa23.18■■□□□ 1.3
CKLF-202ENST00000345436 GLTPD2A6NH11 291 aa23.18■■□□□ 1.3
CKLF-202ENST00000345436 NFKBIEO00221 500 aa23.18■■□□□ 1.3
CKLF-202ENST00000345436 ERFEQ4G0M1 354 aa23.18■■□□□ 1.3
CKLF-202ENST00000345436 PARP10Q53GL7 1025 aa23.18■■□□□ 1.3
CKLF-202ENST00000345436 CCDC93Q567U6 631 aa23.18■■□□□ 1.3
CKLF-202ENST00000345436 RRAGCQ9HB90 399 aa23.18■■□□□ 1.3
CKLF-202ENST00000345436 LAMB4A4D0S4 1761 aa23.17■■□□□ 1.3
CKLF-202ENST00000345436 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
CKLF-202ENST00000345436 HSP90AB3PQ58FF7 597 aa23.17■■□□□ 1.3
CKLF-202ENST00000345436 RTKN2Q8IZC4 609 aa23.17■■□□□ 1.3
CKLF-202ENST00000345436 HOXB7P09629 217 aa23.16■■□□□ 1.3
CKLF-202ENST00000345436 VEGFAP15692 232 aaPredicted RBP23.16■■□□□ 1.3
CKLF-202ENST00000345436 APLP1P51693 650 aa23.16■■□□□ 1.3
CKLF-202ENST00000345436 FSTL1Q12841 308 aa23.16■■□□□ 1.3
CKLF-202ENST00000345436 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
CKLF-202ENST00000345436 TRIM35Q9UPQ4 493 aa23.16■■□□□ 1.3
CKLF-202ENST00000345436 GPTP24298 496 aa23.15■■□□□ 1.3
CKLF-202ENST00000345436 RPGRQ92834 1020 aaKnown RBP23.15■■□□□ 1.3
CKLF-202ENST00000345436 CFAP44Q96MT7 982 aa23.15■■□□□ 1.3
CKLF-202ENST00000345436 IBTKQ9P2D0 1353 aaPredicted RBP23.14■■□□□ 1.3
CKLF-202ENST00000345436 ZNF34Q8IZ26 560 aa23.14■■□□□ 1.29
CKLF-202ENST00000345436 TMX4Q9H1E5 349 aaPredicted RBP23.14■■□□□ 1.29
CKLF-202ENST00000345436 DDX21Q9NR30 783 aaKnown RBP eCLIP23.14■■□□□ 1.29
CKLF-202ENST00000345436 GRIPAP1Q4V328 841 aa23.13■■□□□ 1.29
CKLF-202ENST00000345436 CC2D2BQ6DHV5 1058 aa23.13■■□□□ 1.29
CKLF-202ENST00000345436 ANKRD31Q8N7Z5 1873 aa23.13■■□□□ 1.29
CKLF-202ENST00000345436 PDIA6Q15084 440 aa23.12■■□□□ 1.29
CKLF-202ENST00000345436 COPS6Q7L5N1 327 aa23.12■■□□□ 1.29
CKLF-202ENST00000345436 NUTM1Q86Y26 1132 aa23.12■■□□□ 1.29
CKLF-202ENST00000345436 NLRP3Q96P20 1036 aa23.12■■□□□ 1.29
CKLF-202ENST00000345436 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
CKLF-202ENST00000345436 AIMP1Q12904 312 aaKnown RBP23.11■■□□□ 1.29
CKLF-202ENST00000345436 HDGFL1Q5TGJ6 251 aa23.11■■□□□ 1.29
CKLF-202ENST00000345436 SUSD4Q5VX71 490 aa23.11■■□□□ 1.29
CKLF-202ENST00000345436 C7orf43Q8WVR3 580 aa23.11■■□□□ 1.29
CKLF-202ENST00000345436 NECTIN2Q92692 538 aa23.11■■□□□ 1.29
CKLF-202ENST00000345436 RBM17Q96I25 401 aaKnown RBP23.11■■□□□ 1.29
CKLF-202ENST00000345436 DBF4Q9UBU7 674 aaPredicted RBP23.11■■□□□ 1.29
CKLF-202ENST00000345436 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
CKLF-202ENST00000345436 APAF1O14727 1248 aa23.1■■□□□ 1.29
CKLF-202ENST00000345436 GNAI1P63096 354 aa23.1■■□□□ 1.29
CKLF-202ENST00000345436 FKBP4Q02790 459 aaKnown RBP eCLIP23.1■■□□□ 1.29
CKLF-202ENST00000345436 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
CKLF-202ENST00000345436 SMC1BQ8NDV3 1235 aa23.1■■□□□ 1.29
CKLF-202ENST00000345436 SBF1O95248 1867 aa23.1■■□□□ 1.29
CKLF-202ENST00000345436 PRELPP51888 382 aa23.09■■□□□ 1.29
CKLF-202ENST00000345436 XAGE3Q8WTP9 111 aa23.09■■□□□ 1.29
CKLF-202ENST00000345436 HOXA10P31260 410 aaPredicted RBP23.08■■□□□ 1.29
CKLF-202ENST00000345436 LRP10Q7Z4F1 713 aa23.08■■□□□ 1.29
CKLF-202ENST00000345436 IFT57Q9NWB7 429 aa23.08■■□□□ 1.29
CKLF-202ENST00000345436 HYPKQ9NX55 129 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms