RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 ATF3P18847 181 aa7.56□□□□□ -1.2
PCDH18-201ENST00000344876 GNG11P61952 73 aa7.56□□□□□ -1.2
PCDH18-201ENST00000344876 PLEKHO1Q53GL0 409 aaPredicted RBP7.56□□□□□ -1.2
PCDH18-201ENST00000344876 CEP135Q66GS9 1140 aa7.56□□□□□ -1.2
PCDH18-201ENST00000344876 CCDC12Q8WUD4 166 aaPredicted RBP7.56□□□□□ -1.2
PCDH18-201ENST00000344876 PRPF31Q8WWY3 499 aaKnown RBP7.56□□□□□ -1.2
PCDH18-201ENST00000344876 CCDC94Q9BW85 323 aaPredicted RBP7.56□□□□□ -1.2
PCDH18-201ENST00000344876 CCDC8Q9H0W5 538 aaPredicted RBP7.56□□□□□ -1.2
PCDH18-201ENST00000344876 DYNC1I1O14576 645 aa7.56□□□□□ -1.2
PCDH18-201ENST00000344876 CNNM3Q8NE01 707 aa7.56□□□□□ -1.2
PCDH18-201ENST00000344876 AIDAQ96BJ3 306 aa7.56□□□□□ -1.2
PCDH18-201ENST00000344876 SPG7Q9UQ90 795 aa7.56□□□□□ -1.2
PCDH18-201ENST00000344876 HCLS1P14317 486 aaPredicted RBP7.56□□□□□ -1.2
PCDH18-201ENST00000344876 APBB1IPQ7Z5R6 666 aaPredicted RBP7.56□□□□□ -1.2
PCDH18-201ENST00000344876 CTNNA2P26232 953 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 FLIIQ13045 1269 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 DNAJC21Q5F1R6 531 aaKnown RBP7.55□□□□□ -1.2
PCDH18-201ENST00000344876 TCERG1LQ5VWI1 586 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 ZNF530Q6P9A1 599 aaPredicted RBP7.55□□□□□ -1.2
PCDH18-201ENST00000344876 TXNDC2Q86VQ3 553 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 CEP126Q9P2H0 1117 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 IVLP07476 585 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
PCDH18-201ENST00000344876 C8orf76Q96K31 380 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 PRAM1Q96QH2 718 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 KIF4AO95239 1232 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 STAMBPO95630 424 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 CEP128Q6ZU80 1094 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 HOOK3Q86VS8 718 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 CEP57Q86XR8 500 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 F6X3S4 739 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 RAB11FIP3O75154 756 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 PHACTR2O75167 634 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 PEX14O75381 377 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 ARMC9Q7Z3E5 817 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 CABP1Q9NZU7 370 aa7.55□□□□□ -1.2
PCDH18-201ENST00000344876 GCOM1H8Y6P7 765 aaPredicted RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 MYZAPP0CAP1 466 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 MTIF2P46199 727 aaKnown RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 MICALL1Q8N3F8 863 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 COMMD10Q9Y6G5 202 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 ZFYP08048 801 aaPredicted RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 SREK1Q8WXA9 508 aaKnown RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 SEPT8Q92599 483 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 HOMER2Q9NSB8 354 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 RUSC2Q8N2Y8 1516 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 KIF2AO00139 706 aaPredicted RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 LRRC23Q53EV4 343 aaPredicted RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 MCM10Q7L590 875 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 WDR63Q8IWG1 891 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 CEP120Q8N960 986 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 SCLT1Q96NL6 688 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 TSPY2A6NKD2 308 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 RANBP6O60518 1105 aaKnown RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 TSPY3P0CV98 308 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 TSPY8P0CW00 308 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 IDEP14735 1019 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 TSPY1Q01534 308 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 ATP6V1E2Q96A05 226 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 HYPKQ9NX55 129 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 USO1O60763 962 aaKnown RBP7.54□□□□□ -1.2
PCDH18-201ENST00000344876 MX1P20591 662 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 GJB2P29033 226 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 CETN2P41208 172 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 ANKRD24Q8TF21 1146 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 ATRIPQ8WXE1 791 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 CTNNA3Q9UI47 895 aa7.54□□□□□ -1.2
PCDH18-201ENST00000344876 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 ZRANB2O95218 330 aaKnown RBP eCLIP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 YEATS4O95619 227 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 PTGS1P23219 599 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 DDX27Q96GQ7 796 aaKnown RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 SMIM23A6NLE4 172 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 BTBD11A6QL63 1104 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 ZNF165P49910 485 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 BMS1Q14692 1282 aaKnown RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 CYB5RLQ6IPT4 315 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 RGS22Q8NE09 1264 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 VAT1LQ9HCJ6 419 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 CEP131Q9UPN4 1083 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 PPP1R12BO60237 982 aaPredicted RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 POTEJP0CG39 1038 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 PRKG1Q13976 671 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 ZSCAN25Q6NSZ9 544 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 PUF60Q9UHX1 559 aaKnown RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 DNAI1Q9UI46 699 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 DESP17661 470 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 HAND2P61296 217 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 MXRA7P84157 204 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 KRT32Q14532 448 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 CCDC6Q16204 474 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 TRIML1Q8N9V2 468 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 TSG101Q99816 390 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 TTC12Q9H892 705 aaPredicted RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 METTL24Q5JXM2 366 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 SH2D4BQ5SQS7 431 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms