RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
RPL28-201ENST00000344063 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.37
RPL28-201ENST00000344063 CALCOCO1Q9P1Z2 691 aa12.77□□□□□ -0.37
RPL28-201ENST00000344063 MYOM2P54296 1465 aa12.77□□□□□ -0.37
RPL28-201ENST00000344063 H0YHG0 523 aa12.77□□□□□ -0.37
RPL28-201ENST00000344063 CCDC70Q6NSX1 233 aa12.77□□□□□ -0.37
RPL28-201ENST00000344063 ZSCAN22P10073 491 aaPredicted RBP12.76□□□□□ -0.37
RPL28-201ENST00000344063 GJB2P29033 226 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 IL13P35225 146 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 PCMTD1Q96MG8 357 aaPredicted RBP12.76□□□□□ -0.37
RPL28-201ENST00000344063 PTGS1P23219 599 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 ZNF165P49910 485 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 PKP1Q13835 747 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 KIF6Q6ZMV9 814 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 GTPBP4Q9BZE4 634 aaKnown RBP12.76□□□□□ -0.37
RPL28-201ENST00000344063 CCDC8Q9H0W5 538 aaPredicted RBP12.76□□□□□ -0.37
RPL28-201ENST00000344063 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 HMGB1P09429 215 aaKnown RBP12.76□□□□□ -0.37
RPL28-201ENST00000344063 VPS37DQ86XT2 251 aa12.76□□□□□ -0.37
RPL28-201ENST00000344063 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
RPL28-201ENST00000344063 TNRQ92752 1358 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
RPL28-201ENST00000344063 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 ZSCAN25Q6NSZ9 544 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 TMEM63CQ9P1W3 806 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 OTUD7AQ8TE49 926 aaPredicted RBP12.75□□□□□ -0.37
RPL28-201ENST00000344063 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 FLT4P35916 1363 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 AXDND1Q5T1B0 1012 aaPredicted RBP12.75□□□□□ -0.37
RPL28-201ENST00000344063 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
RPL28-201ENST00000344063 LMBRD1Q9NUN5 540 aa12.75□□□□□ -0.37
RPL28-201ENST00000344063 SOS1Q07889 1333 aaPredicted RBP12.75□□□□□ -0.37
RPL28-201ENST00000344063 MARCH6O60337 910 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 CDKL5O76039 1030 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 KRT222Q8N1A0 295 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 CTAGE5O15320 804 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 SFPQP23246 707 aaKnown RBP eCLIP12.74□□□□□ -0.37
RPL28-201ENST00000344063 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 DHX37Q8IY37 1157 aaKnown RBP12.74□□□□□ -0.37
RPL28-201ENST00000344063 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
RPL28-201ENST00000344063 ACBD3Q9H3P7 528 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 ZNF445P59923 1031 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
RPL28-201ENST00000344063 HMG20BQ9P0W2 317 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
RPL28-201ENST00000344063 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
RPL28-201ENST00000344063 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
RPL28-201ENST00000344063 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
RPL28-201ENST00000344063 ANO10Q9NW15 660 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 KIF24Q5T7B8 1368 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 CBFA2T2O43439 604 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 MYRIPQ8NFW9 859 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 CNNM1Q9NRU3 951 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 G3V3G9 751 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 KIF2AO00139 706 aaPredicted RBP12.73□□□□□ -0.37
RPL28-201ENST00000344063 CAVIN2O95810 425 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 DCAF8Q5TAQ9 597 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 CDC42BPAQ5VT25 1732 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 MSH6P52701 1360 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 CHL1O00533 1208 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 TRIM22Q8IYM9 498 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 PPP1R9BQ96SB3 815 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 RUFY1Q96T51 708 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 MYD88Q99836 296 aa12.73□□□□□ -0.37
RPL28-201ENST00000344063 SMTNL1A8MU46 457 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
RPL28-201ENST00000344063 CHMLP26374 656 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 FAM193AP78312 1265 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
RPL28-201ENST00000344063 ANO6Q4KMQ2 910 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 ALDH1L1O75891 902 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 CFAP100Q494V2 611 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 FILIP1LQ4L180 1135 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 DACH1Q9UI36 760 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 USP19O94966 1318 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 BIN1O00499 593 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 ZSWIM4Q9H7M6 989 aa12.72□□□□□ -0.37
RPL28-201ENST00000344063 ABCC4O15439 1325 aa12.71□□□□□ -0.37
RPL28-201ENST00000344063 GADD45BO75293 160 aaPredicted RBP12.71□□□□□ -0.37
RPL28-201ENST00000344063 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.37
RPL28-201ENST00000344063 ZC3H6P61129 1189 aaKnown RBP12.71□□□□□ -0.37
RPL28-201ENST00000344063 TTC41PQ6P2S7 1318 aa12.71□□□□□ -0.38
RPL28-201ENST00000344063 IQGAP3Q86VI3 1631 aa12.71□□□□□ -0.38
RPL28-201ENST00000344063 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 LUZP1Q86V48 1076 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 NACAP1Q9BZK3 213 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 NEMFO60524 1076 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 F13A1P00488 732 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 SKILP12757 684 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms