RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 KIAA2012Q0VF49 1180 aa14.88□□□□□ -0.03
LRRK2-202ENST00000343742 HELBQ8NG08 1087 aaPredicted RBP14.88□□□□□ -0.03
LRRK2-202ENST00000343742 FAM89AQ96GI7 184 aa14.88□□□□□ -0.03
LRRK2-202ENST00000343742 LRRC2Q9BYS8 371 aa14.88□□□□□ -0.03
LRRK2-202ENST00000343742 GIGYF1O75420 1035 aaPredicted RBP14.88□□□□□ -0.03
LRRK2-202ENST00000343742 CPA1P15085 419 aa14.88□□□□□ -0.03
LRRK2-202ENST00000343742 CWC22Q9HCG8 908 aaKnown RBP14.88□□□□□ -0.03
LRRK2-202ENST00000343742 SOS1Q07889 1333 aaPredicted RBP14.88□□□□□ -0.03
LRRK2-202ENST00000343742 TRIM29Q14134 588 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 RAB11FIP4Q86YS3 637 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 KLHL34Q8N239 644 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 LRP2BPQ9P2M1 347 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 ERICH2A1L162 156 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 DDB1Q16531 1140 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 CHAF1AQ13111 956 aaPredicted RBP14.87□□□□□ -0.03
LRRK2-202ENST00000343742 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 NPHP4O75161 1426 aaPredicted RBP14.87□□□□□ -0.03
LRRK2-202ENST00000343742 CAMSAP1Q5T5Y3 1602 aa14.87□□□□□ -0.03
LRRK2-202ENST00000343742 DHX16O60231 1041 aaKnown RBP14.86□□□□□ -0.03
LRRK2-202ENST00000343742 NASPP49321 788 aaPredicted RBP14.86□□□□□ -0.03
LRRK2-202ENST00000343742 TIMM10P62072 90 aa14.86□□□□□ -0.03
LRRK2-202ENST00000343742 HSP90AB3PQ58FF7 597 aa14.86□□□□□ -0.03
LRRK2-202ENST00000343742 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
LRRK2-202ENST00000343742 NOL10Q9BSC4 688 aaKnown RBP14.86□□□□□ -0.03
LRRK2-202ENST00000343742 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.03
LRRK2-202ENST00000343742 RAI14Q9P0K7 980 aa14.86□□□□□ -0.03
LRRK2-202ENST00000343742 IGHMBP2P38935 993 aaKnown RBP14.86□□□□□ -0.03
LRRK2-202ENST00000343742 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
LRRK2-202ENST00000343742 SUCLG2Q96I99 432 aa14.86□□□□□ -0.03
LRRK2-202ENST00000343742 TFCP2Q12800 502 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 NECAB1Q8N987 351 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
LRRK2-202ENST00000343742 QRICH2Q9H0J4 1663 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 KIAA0232Q92628 1395 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 PHF23Q9BUL5 403 aaPredicted RBP14.85□□□□□ -0.03
LRRK2-202ENST00000343742 ZNF335Q9H4Z2 1342 aaPredicted RBP14.85□□□□□ -0.03
LRRK2-202ENST00000343742 BECN2A8MW95 431 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 GSPT1P15170 499 aaKnown RBP14.85□□□□□ -0.03
LRRK2-202ENST00000343742 GUCY1B3Q02153 619 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 ZGPATQ8N5A5 531 aaKnown RBP14.85□□□□□ -0.03
LRRK2-202ENST00000343742 PTPRMP28827 1452 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 GOLGA6L6A8MZA4 724 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
LRRK2-202ENST00000343742 CCDC82Q8N4S0 544 aa14.85□□□□□ -0.03
LRRK2-202ENST00000343742 NEXMIFQ5QGS0 1516 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 TMX3Q96JJ7 454 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 ANKRD18BA2A2Z9 1011 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 CCT2P78371 535 aaKnown RBP14.84□□□□□ -0.03
LRRK2-202ENST00000343742 RTL1A6NKG5 1358 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 WDR33Q9C0J8 1336 aaKnown RBP14.84□□□□□ -0.03
LRRK2-202ENST00000343742 PHKG2P15735 406 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 DNAJC10Q8IXB1 793 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
LRRK2-202ENST00000343742 CLTCQ00610 1675 aaKnown RBP14.84□□□□□ -0.03
LRRK2-202ENST00000343742 CHMLP26374 656 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
LRRK2-202ENST00000343742 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
LRRK2-202ENST00000343742 MRE11P49959 708 aa14.83□□□□□ -0.04
LRRK2-202ENST00000343742 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
LRRK2-202ENST00000343742 AIDAQ96BJ3 306 aa14.83□□□□□ -0.04
LRRK2-202ENST00000343742 EDC3Q96F86 508 aaKnown RBP14.83□□□□□ -0.04
LRRK2-202ENST00000343742 TDO2P48775 406 aa14.83□□□□□ -0.04
LRRK2-202ENST00000343742 USP26Q9BXU7 913 aa14.83□□□□□ -0.04
LRRK2-202ENST00000343742 AKAP2Q9Y2D5 859 aa14.83□□□□□ -0.04
LRRK2-202ENST00000343742 LMTK3Q96Q04 1460 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 ZPR1O75312 459 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 GOLGA6L19H0YKK7 550 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 SLC4A8Q2Y0W8 1093 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 PCDH11XQ9BZA7 1347 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 PCDH11YQ9BZA8 1340 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 PDCP20941 246 aa14.82□□□□□ -0.04
LRRK2-202ENST00000343742 NMIQ13287 307 aaPredicted RBP14.82□□□□□ -0.04
LRRK2-202ENST00000343742 MINDY4BA8MYZ0 360 aa14.81□□□□□ -0.04
LRRK2-202ENST00000343742 LIMCH1Q9UPQ0 1083 aa14.81□□□□□ -0.04
LRRK2-202ENST00000343742 TTLL7Q6ZT98 887 aa14.81□□□□□ -0.04
LRRK2-202ENST00000343742 SDF4Q9BRK5 362 aa14.81□□□□□ -0.04
LRRK2-202ENST00000343742 TEX13AQ9BXU3 409 aaPredicted RBP14.81□□□□□ -0.04
LRRK2-202ENST00000343742 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
LRRK2-202ENST00000343742 SYCE3A1L190 88 aa14.81□□□□□ -0.04
LRRK2-202ENST00000343742 VPS53Q5VIR6 699 aa14.81□□□□□ -0.04
LRRK2-202ENST00000343742 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
LRRK2-202ENST00000343742 PIK3C2BO00750 1634 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 NRDCO43847 1150 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 TOM1O60784 492 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 METTL22Q9BUU2 404 aaPredicted RBP14.8□□□□□ -0.04
LRRK2-202ENST00000343742 GNL3LQ9NVN8 582 aaKnown RBP14.8□□□□□ -0.04
LRRK2-202ENST00000343742 ERBB3P21860 1342 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 ANKRD1Q15327 319 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 CCDC73Q6ZRK6 1079 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 CHST3Q7LGC8 479 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 TFIP11Q9UBB9 837 aaKnown RBP14.8□□□□□ -0.04
LRRK2-202ENST00000343742 CCDC24Q8N4L8 307 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 DBNDD2Q9BQY9 259 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 GCKRQ14397 625 aa14.8□□□□□ -0.04
LRRK2-202ENST00000343742 BCL11BQ9C0K0 894 aaPredicted RBP14.8□□□□□ -0.04
LRRK2-202ENST00000343742 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms