RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
UBE4B-202ENST00000343090 C8orf76Q96K31 380 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 BIN1O00499 593 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 GPTP24298 496 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 GIMAP6Q6P9H5 292 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 SNX21Q969T3 373 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 TRMT1Q9NXH9 659 aaKnown RBP9.41□□□□□ -0.9
UBE4B-202ENST00000343090 CLIP2Q9UDT6 1046 aa9.41□□□□□ -0.9
UBE4B-202ENST00000343090 VAMP4O75379 141 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 LRRC2Q9BYS8 371 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-202ENST00000343090 KLHL10Q6JEL2 608 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
UBE4B-202ENST00000343090 MYRIPQ8NFW9 859 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 TANGO6Q9C0B7 1094 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 CNPY2Q9Y2B0 182 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 PIK3R4Q99570 1358 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 PPIP5K1Q6PFW1 1433 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 U2AF2P26368 475 aaKnown RBP eCLIP9.4□□□□□ -0.99e-7■■■□□ 17.2
UBE4B-202ENST00000343090 PIP4K2AP48426 406 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-202ENST00000343090 RBM25P49756 843 aaKnown RBP9.4□□□□□ -0.9
UBE4B-202ENST00000343090 PTPN14Q15678 1187 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 TSC1Q92574 1164 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 ZNHIT6Q9NWK9 470 aaKnown RBP9.4□□□□□ -0.9
UBE4B-202ENST00000343090 TMOD3Q9NYL9 352 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 OGFRQ9NZT2 677 aa9.4□□□□□ -0.9
UBE4B-202ENST00000343090 H0YHG0 523 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 STARD3NLO95772 234 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 AXDND1Q5T1B0 1012 aaPredicted RBP9.4□□□□□ -0.91
UBE4B-202ENST00000343090 ISM2Q6H9L7 571 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 TMCO3Q6UWJ1 677 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 ESYT1Q9BSJ8 1104 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 TMX1Q9H3N1 280 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 ZBTB40Q9NUA8 1239 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 SMTNL1A8MU46 457 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 SSBP05455 408 aaKnown RBP eCLIP9.4□□□□□ -0.91
UBE4B-202ENST00000343090 IGHMBP2P38935 993 aaKnown RBP9.4□□□□□ -0.91
UBE4B-202ENST00000343090 FSIP1Q8NA03 581 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 AKAP2Q9Y2D5 859 aa9.4□□□□□ -0.91
UBE4B-202ENST00000343090 POGZQ7Z3K3 1410 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 ZFYVE27Q5T4F4 411 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 KIAA0556O60303 1618 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 POLR3DP05423 398 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 CALRP27797 417 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 IFIT5Q13325 482 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 DDX46Q7L014 1031 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 ZGPATQ8N5A5 531 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 ANO10Q9NW15 660 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 RDXP35241 583 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 GTF2A1P52655 376 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 UVSSAQ2YD98 709 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 ERCC4Q92889 916 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 PA2G4Q9UQ80 394 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 PIK3C2GO75747 1445 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 ZNF213O14771 459 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 SFPQP23246 707 aaKnown RBP eCLIP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 SLC39A6Q13433 755 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 CHRNA2Q15822 529 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 UTP14CQ5TAP6 766 aaKnown RBP9.39□□□□□ -0.91
UBE4B-202ENST00000343090 NAPBQ9H115 298 aa9.39□□□□□ -0.91
UBE4B-202ENST00000343090 STIM1Q13586 685 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 SOGA3Q5TF21 947 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 FEZ1Q99689 392 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 A0A1W2PP64 1363 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 CEP85Q6P2H3 762 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 USP48Q86UV5 1035 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 ANKRD24Q8TF21 1146 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 PPP1R9BQ96SB3 815 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 TRMT112Q9UI30 125 aaKnown RBP9.38□□□□□ -0.91
UBE4B-202ENST00000343090 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-202ENST00000343090 FAM193AP78312 1265 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 UBXN4Q92575 508 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 ERBB4Q15303 1308 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-202ENST00000343090 DHX8Q14562 1220 aaKnown RBP9.38□□□□□ -0.91
UBE4B-202ENST00000343090 NEK1Q96PY6 1258 aa9.38□□□□□ -0.91
UBE4B-202ENST00000343090 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 OTUD7AQ8TE49 926 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-202ENST00000343090 WASF1Q92558 559 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-202ENST00000343090 UBE2HP62256 183 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 KRT28Q7Z3Y7 464 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 A2MP01023 1474 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 TEX14Q8IWB6 1497 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 ZNF500O60304 480 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-202ENST00000343090 ATP8B2P98198 1209 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 BRF1Q92994 677 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 HMGB1P09429 215 aaKnown RBP9.37□□□□□ -0.91
UBE4B-202ENST00000343090 USP5P45974 858 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 USP16Q9Y5T5 823 aa9.37□□□□□ -0.91
UBE4B-202ENST00000343090 RANBP6O60518 1105 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 CPLX3Q8WVH0 158 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 DCTPP1Q9H773 170 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 RBM8AQ9Y5S9 174 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms