RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 LTBP1Q14766 1721 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 ERC2O15083 957 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 GPT2Q8TD30 523 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 PHAXQ9H814 394 aaKnown RBP10□□□□□ -0.81
CFAP54-201ENST00000342887 FBXL16Q8N461 479 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 FUCA2Q9BTY2 467 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 F6X3S4 739 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 MX1P20591 662 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 PKP1Q13835 747 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 ANKLE2Q86XL3 938 aa10□□□□□ -0.81
CFAP54-201ENST00000342887 KCNQ3O43525 872 aa9.99□□□□□ -0.81
CFAP54-201ENST00000342887 SMARCA5O60264 1052 aaPredicted RBP9.99□□□□□ -0.81
CFAP54-201ENST00000342887 SKOR2Q2VWA4 1001 aaPredicted RBP9.99□□□□□ -0.81
CFAP54-201ENST00000342887 TM6SF1Q9BZW5 370 aa9.99□□□□□ -0.81
CFAP54-201ENST00000342887 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
CFAP54-201ENST00000342887 PALLDQ8WX93 1383 aa9.99□□□□□ -0.81
CFAP54-201ENST00000342887 CLCN1P35523 988 aa9.99□□□□□ -0.81
CFAP54-201ENST00000342887 MIS18AQ9NYP9 233 aa9.99□□□□□ -0.81
CFAP54-201ENST00000342887 SOS2Q07890 1332 aaPredicted RBP9.99□□□□□ -0.81
CFAP54-201ENST00000342887 GCP02774 474 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 IGKV5-2P06315 115 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 LRRCC1Q9C099 1032 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 ZNF609O15014 1411 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 NECTIN1Q15223 517 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 HSCBQ8IWL3 235 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 ZBTB22O15209 634 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 MRE11P49959 708 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 RGS22Q8NE09 1264 aa9.98□□□□□ -0.81
CFAP54-201ENST00000342887 NBPF7P0C2Y1 421 aaPredicted RBP9.97□□□□□ -0.81
CFAP54-201ENST00000342887 SSFA2P28290 1259 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 HS1BP3Q53T59 392 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 L1TD1Q5T7N2 865 aaKnown RBP9.97□□□□□ -0.81
CFAP54-201ENST00000342887 MCM2P49736 904 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 LRRFIP2Q9Y608 721 aaKnown RBP9.97□□□□□ -0.81
CFAP54-201ENST00000342887 SPATA31A3Q5VYP0 1347 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 NLRP6P59044 892 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 AGXT2Q9BYV1 514 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 NPHP3Q7Z494 1330 aa9.97□□□□□ -0.81
CFAP54-201ENST00000342887 SASH1O94885 1247 aa9.96□□□□□ -0.81
CFAP54-201ENST00000342887 ELL2O00472 640 aaPredicted RBP9.96□□□□□ -0.81
CFAP54-201ENST00000342887 HMMRO75330 724 aa9.96□□□□□ -0.81
CFAP54-201ENST00000342887 TNRC6CQ9HCJ0 1690 aaKnown RBP9.96□□□□□ -0.82
CFAP54-201ENST00000342887 HSP90AB1P08238 724 aaKnown RBP9.96□□□□□ -0.82
CFAP54-201ENST00000342887 PROSER3Q2NL68 480 aa9.96□□□□□ -0.82
CFAP54-201ENST00000342887 SLKQ9H2G2 1235 aaPredicted RBP9.96□□□□□ -0.82
CFAP54-201ENST00000342887 MYH14Q7Z406 1995 aaKnown RBP9.96□□□□□ -0.82
CFAP54-201ENST00000342887 RBM43Q6ZSC3 357 aaKnown RBP9.95□□□□□ -0.82
CFAP54-201ENST00000342887 RHPN1Q8TCX5 695 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 GRPEL1Q9HAV7 217 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 PHKG2P15735 406 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 KSR2Q6VAB6 950 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 PANK2Q9BZ23 570 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 CHPF2Q9P2E5 772 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 REC8O95072 547 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 PDE4CQ08493 712 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 GLIPR1L2Q4G1C9 344 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 ZGPATQ8N5A5 531 aaKnown RBP9.95□□□□□ -0.82
CFAP54-201ENST00000342887 DNAAF4Q8WXU2 420 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
CFAP54-201ENST00000342887 SLC52A2Q9HAB3 445 aa9.95□□□□□ -0.82
CFAP54-201ENST00000342887 DDX21Q9NR30 783 aaKnown RBP eCLIP9.95□□□□□ -0.82
CFAP54-201ENST00000342887 ABTB2Q8N961 1025 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 SNX14Q9Y5W7 946 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 RIC1Q4ADV7 1423 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 NUCB2P80303 420 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 QSER1Q2KHR3 1735 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 SALL1Q9NSC2 1324 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 NID2Q14112 1375 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 CARMIL3Q8ND23 1372 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 PPP1R42Q7Z4L9 355 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 ORAI2Q96SN7 254 aa9.94□□□□□ -0.82
CFAP54-201ENST00000342887 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
CFAP54-201ENST00000342887 MYH13Q9UKX3 1938 aa9.93□□□□□ -0.82
CFAP54-201ENST00000342887 MAP4K1Q92918 833 aa9.93□□□□□ -0.82
CFAP54-201ENST00000342887 COPRSQ9NQ92 184 aa9.93□□□□□ -0.82
CFAP54-201ENST00000342887 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
CFAP54-201ENST00000342887 DBF4Q9UBU7 674 aaPredicted RBP9.93□□□□□ -0.82
CFAP54-201ENST00000342887 NGDNQ8NEJ9 315 aaKnown RBP9.93□□□□□ -0.82
CFAP54-201ENST00000342887 KIF1BPQ96EK5 621 aa9.93□□□□□ -0.82
CFAP54-201ENST00000342887 NSFL1CQ9UNZ2 370 aaKnown RBP9.93□□□□□ -0.82
CFAP54-201ENST00000342887 AMPHP49418 695 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 EVCP57679 992 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 COL9A3Q14050 684 aaPredicted RBP9.92□□□□□ -0.82
CFAP54-201ENST00000342887 RUFY3Q7L099 469 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 C19orf44Q9H6X5 657 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 LINS1Q8NG48 757 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 CHMP4AQ9BY43 222 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 PRDM4Q9UKN5 801 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 MYH2Q9UKX2 1941 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 TERF1P54274 439 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 ANKRD24Q8TF21 1146 aa9.92□□□□□ -0.82
CFAP54-201ENST00000342887 ESF1Q9H501 851 aaKnown RBP9.92□□□□□ -0.82
CFAP54-201ENST00000342887 PRAMEF22A3QJZ6 481 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 NEURL1BA8MQ27 555 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 FOXP2O15409 715 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms