RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 CACNA1FO60840 1977 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
NBR1-201ENST00000341165 GRM8O00222 908 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 TMX3Q96JJ7 454 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
NBR1-201ENST00000341165 EVI5LQ96CN4 794 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 NFAT5O94916 1531 aa9.59□□□□□ -0.87
NBR1-201ENST00000341165 WDR33Q9C0J8 1336 aaKnown RBP9.58□□□□□ -0.88
NBR1-201ENST00000341165 NWD1Q149M9 1564 aa9.58□□□□□ -0.88
NBR1-201ENST00000341165 NBPF7P0C2Y1 421 aaPredicted RBP9.58□□□□□ -0.88
NBR1-201ENST00000341165 XRCC6P12956 609 aaKnown RBP eCLIP9.58□□□□□ -0.88
NBR1-201ENST00000341165 PSMA5P28066 241 aa9.58□□□□□ -0.88
NBR1-201ENST00000341165 MTX1Q13505 466 aa9.58□□□□□ -0.88
NBR1-201ENST00000341165 AACSQ86V21 672 aa9.58□□□□□ -0.88
NBR1-201ENST00000341165 ZNF142P52746 1687 aaPredicted RBP9.58□□□□□ -0.88
NBR1-201ENST00000341165 CABP4P57796 275 aa9.58□□□□□ -0.88
NBR1-201ENST00000341165 SNRPA1P09661 255 aaKnown RBP9.58□□□□□ -0.88
NBR1-201ENST00000341165 NOL8Q76FK4 1167 aaKnown RBP9.58□□□□□ -0.88
NBR1-201ENST00000341165 ZSCAN31Q96LW9 406 aaPredicted RBP9.58□□□□□ -0.88
NBR1-201ENST00000341165 FMNL2Q96PY5 1086 aa9.58□□□□□ -0.88
NBR1-201ENST00000341165 SALL3Q9BXA9 1300 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 KCNQ3O43525 872 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 TPRNQ4KMQ1 711 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 DCAF5Q96JK2 942 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 SLC52A2Q9HAB3 445 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 VGLL3A8MV65 326 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 ZNF790Q6PG37 636 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 ERBB3P21860 1342 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
NBR1-201ENST00000341165 ANXA1P04083 346 aa9.57□□□□□ -0.88
NBR1-201ENST00000341165 FAM208AQ9UK61 1670 aaKnown RBP9.57□□□□□ -0.88
NBR1-201ENST00000341165 MAP4K4O95819 1239 aaPredicted RBP9.56□□□□□ -0.88
NBR1-201ENST00000341165 CCDC173Q0VFZ6 552 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 CWC27Q6UX04 472 aaKnown RBP9.56□□□□□ -0.88
NBR1-201ENST00000341165 PLEKHG2Q9H7P9 1386 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 C1orf167Q5SNV9 1468 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 SGSM2O43147 1006 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 HSPA4P34932 840 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 MAP7D2Q96T17 732 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 SMC3Q9UQE7 1217 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 NASPP49321 788 aaPredicted RBP9.56□□□□□ -0.88
NBR1-201ENST00000341165 CYP46A1Q9Y6A2 500 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 LTN1O94822 1766 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 RAD50Q92878 1312 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 KIF1AQ12756 1690 aa9.56□□□□□ -0.88
NBR1-201ENST00000341165 IRX3P78415 501 aaPredicted RBP9.56□□□□□ -0.88
NBR1-201ENST00000341165 CAVIN1Q6NZI2 390 aaKnown RBP9.56□□□□□ -0.88
NBR1-201ENST00000341165 SLIT3O75094 1523 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 MYL6BP14649 208 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 SH2B1Q9NRF2 756 aaPredicted RBP9.55□□□□□ -0.88
NBR1-201ENST00000341165 LIMCH1Q9UPQ0 1083 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 USP42Q9H9J4 1324 aaKnown RBP9.55□□□□□ -0.88
NBR1-201ENST00000341165 ANKRD1Q15327 319 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 FSD1Q9BTV5 496 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 PHKG2P15735 406 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 MYD88Q99836 296 aa9.55□□□□□ -0.88
NBR1-201ENST00000341165 ADCY9O60503 1353 aa9.54□□□□□ -0.88
NBR1-201ENST00000341165 CUL4AQ13619 759 aa9.54□□□□□ -0.88
NBR1-201ENST00000341165 ZGPATQ8N5A5 531 aaKnown RBP9.54□□□□□ -0.88
NBR1-201ENST00000341165 METTL22Q9BUU2 404 aaPredicted RBP9.54□□□□□ -0.88
NBR1-201ENST00000341165 PI4K2BQ8TCG2 481 aa9.54□□□□□ -0.88
NBR1-201ENST00000341165 UPF3BQ9BZI7 483 aaKnown RBP9.54□□□□□ -0.88
NBR1-201ENST00000341165 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
NBR1-201ENST00000341165 FOXD4L5Q5VV16 416 aaPredicted RBP9.54□□□□□ -0.88
NBR1-201ENST00000341165 XAGE3Q8WTP9 111 aa9.54□□□□□ -0.88
NBR1-201ENST00000341165 FOXD4L4Q8WXT5 416 aaPredicted RBP9.54□□□□□ -0.88
NBR1-201ENST00000341165 CHMP4CQ96CF2 233 aa9.54□□□□□ -0.88
NBR1-201ENST00000341165 LETM1O95202 739 aaPredicted RBP9.53□□□□□ -0.88
NBR1-201ENST00000341165 NFATC2IPQ8NCF5 419 aa9.53□□□□□ -0.88
NBR1-201ENST00000341165 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
NBR1-201ENST00000341165 DCCP43146 1447 aa9.53□□□□□ -0.88
NBR1-201ENST00000341165 LRRFIP1Q32MZ4 808 aaKnown RBP9.53□□□□□ -0.88
NBR1-201ENST00000341165 COPS6Q7L5N1 327 aa9.53□□□□□ -0.88
NBR1-201ENST00000341165 BICC1Q9H694 974 aaKnown RBP9.53□□□□□ -0.88
NBR1-201ENST00000341165 CYP2E1P05181 493 aaPredicted RBP9.53□□□□□ -0.88
NBR1-201ENST00000341165 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
NBR1-201ENST00000341165 MED1Q15648 1581 aaPredicted RBP9.52□□□□□ -0.88
NBR1-201ENST00000341165 TMEM94Q12767 1356 aa9.52□□□□□ -0.88
NBR1-201ENST00000341165 TPM2P07951 284 aa9.52□□□□□ -0.88
NBR1-201ENST00000341165 ZNF445P59923 1031 aa9.52□□□□□ -0.88
NBR1-201ENST00000341165 KRT32Q14532 448 aa9.52□□□□□ -0.88
NBR1-201ENST00000341165 SUCLG2Q96I99 432 aa9.52□□□□□ -0.88
NBR1-201ENST00000341165 LMBRD1Q9NUN5 540 aa9.52□□□□□ -0.88
NBR1-201ENST00000341165 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.88
NBR1-201ENST00000341165 PDCP20941 246 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 SLC39A6Q13433 755 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 UNC5CLQ8IV45 518 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 JAKMIP1Q96N16 626 aaKnown RBP9.52□□□□□ -0.89
NBR1-201ENST00000341165 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 R3HCC1Q9Y3T6 440 aaKnown RBP9.52□□□□□ -0.89
NBR1-201ENST00000341165 LMO7Q8WWI1 1683 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 ERBB4Q15303 1308 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 BRD1O95696 1058 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 IL17RAQ96F46 866 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 TM6SF1Q9BZW5 370 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 SIL1Q9H173 461 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 PRDM11Q9NQV5 511 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 HMG20BQ9P0W2 317 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 SNX14Q9Y5W7 946 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms