RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 PLBD2Q8NHP8 589 aa9.89□□□□□ -0.83
TMC1-202ENST00000340019 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
TMC1-202ENST00000340019 TNS1Q9HBL0 1735 aaKnown RBP9.89□□□□□ -0.83
TMC1-202ENST00000340019 CCDC87Q9NVE4 849 aa9.89□□□□□ -0.83
TMC1-202ENST00000340019 RIC3Q7Z5B4 369 aa9.88□□□□□ -0.83
TMC1-202ENST00000340019 CNTNAP4Q9C0A0 1308 aa9.88□□□□□ -0.83
TMC1-202ENST00000340019 EIF5P55010 431 aaKnown RBP9.88□□□□□ -0.83
TMC1-202ENST00000340019 MEIS3Q99687 375 aa9.88□□□□□ -0.83
TMC1-202ENST00000340019 METTL22Q9BUU2 404 aaPredicted RBP9.88□□□□□ -0.83
TMC1-202ENST00000340019 SRCIN1Q9C0H9 1055 aa9.88□□□□□ -0.83
TMC1-202ENST00000340019 KCNQ4P56696 695 aa9.88□□□□□ -0.83
TMC1-202ENST00000340019 LINS1Q8NG48 757 aa9.88□□□□□ -0.83
TMC1-202ENST00000340019 CCNL1Q9UK58 526 aaPredicted RBP9.88□□□□□ -0.83
TMC1-202ENST00000340019 AFDNP55196 1824 aaKnown RBP9.88□□□□□ -0.83
TMC1-202ENST00000340019 C4BP0C0L5 1744 aa9.87□□□□□ -0.83
TMC1-202ENST00000340019 RGPD3A6NKT7 1758 aaPredicted RBP9.87□□□□□ -0.83
TMC1-202ENST00000340019 RGPD4Q7Z3J3 1758 aa9.87□□□□□ -0.83
TMC1-202ENST00000340019 USP44Q9H0E7 712 aa9.87□□□□□ -0.83
TMC1-202ENST00000340019 KDM2BQ8NHM5 1336 aa9.87□□□□□ -0.83
TMC1-202ENST00000340019 ALDH1L1O75891 902 aa9.87□□□□□ -0.83
TMC1-202ENST00000340019 IGKV5-2P06315 115 aa9.87□□□□□ -0.83
TMC1-202ENST00000340019 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
TMC1-202ENST00000340019 ANKRD36CQ5JPF3 1778 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 LRRC4BQ9NT99 713 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 NUP98P52948 1817 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 CWF19L2Q2TBE0 894 aaKnown RBP9.86□□□□□ -0.83
TMC1-202ENST00000340019 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 MAP3K15Q6ZN16 1313 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 NEURL1BA8MQ27 555 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 PLSCR1O15162 318 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 IGHDP01880 384 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 MYD88Q99836 296 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 C1orf115Q9H7X2 142 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
TMC1-202ENST00000340019 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
TMC1-202ENST00000340019 KIF6Q6ZMV9 814 aa9.85□□□□□ -0.83
TMC1-202ENST00000340019 PROM2Q8N271 834 aa9.85□□□□□ -0.83
TMC1-202ENST00000340019 ZBTB3Q9H5J0 574 aa9.85□□□□□ -0.83
TMC1-202ENST00000340019 ZNF330Q9Y3S2 320 aaPredicted RBP9.85□□□□□ -0.83
TMC1-202ENST00000340019 UTYO14607 1347 aa9.85□□□□□ -0.83
TMC1-202ENST00000340019 GNAI3P08754 354 aa9.85□□□□□ -0.83
TMC1-202ENST00000340019 HDAC1Q13547 482 aaPredicted RBP9.85□□□□□ -0.83
TMC1-202ENST00000340019 ERVV-1B6SEH8 477 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 NBPF7P0C2Y1 421 aaPredicted RBP9.84□□□□□ -0.83
TMC1-202ENST00000340019 DZIP3Q86Y13 1208 aaKnown RBP9.84□□□□□ -0.83
TMC1-202ENST00000340019 SIRT2Q8IXJ6 389 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 UBR3Q6ZT12 1888 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 COL15A1P39059 1388 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 GCKRQ14397 625 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 CENPQQ7L2Z9 268 aaPredicted RBP9.84□□□□□ -0.83
TMC1-202ENST00000340019 ISCA1Q9BUE6 129 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 GRM8O00222 908 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 RPS6KA4O75676 772 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 GNAI2P04899 355 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 TCIRG1Q13488 830 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 HLFQ16534 295 aa9.84□□□□□ -0.83
TMC1-202ENST00000340019 GIGYF2Q6Y7W6 1299 aaKnown RBP9.84□□□□□ -0.83
TMC1-202ENST00000340019 C4AP0C0L4 1744 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 SCN7AQ01118 1682 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 ATP5J2-PTCD1G3V325 749 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 APBA3O96018 575 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 UBTFL1P0CB47 393 aaPredicted RBP9.83□□□□□ -0.84
TMC1-202ENST00000340019 TRIM28Q13263 835 aaKnown RBP9.83□□□□□ -0.84
TMC1-202ENST00000340019 TXNRD1Q16881 649 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 CEP85Q6P2H3 762 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 TBC1D2BQ9UPU7 963 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 CAMTA2O94983 1202 aa9.83□□□□□ -0.84
TMC1-202ENST00000340019 RPAP2Q8IXW5 612 aaPredicted RBP9.83□□□□□ -0.84
TMC1-202ENST00000340019 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
TMC1-202ENST00000340019 AMIGO3Q86WK7 504 aa9.82□□□□□ -0.84
TMC1-202ENST00000340019 ANKRD44Q8N8A2 993 aa9.82□□□□□ -0.84
TMC1-202ENST00000340019 CCDC191Q8NCU4 936 aa9.82□□□□□ -0.84
TMC1-202ENST00000340019 RWDD1Q9H446 243 aaPredicted RBP9.82□□□□□ -0.84
TMC1-202ENST00000340019 LRRFIP2Q9Y608 721 aaKnown RBP9.82□□□□□ -0.84
TMC1-202ENST00000340019 A0A087WZG4 1122 aa9.82□□□□□ -0.84
TMC1-202ENST00000340019 GNPATO15228 680 aa9.82□□□□□ -0.84
TMC1-202ENST00000340019 HSP90AB3PQ58FF7 597 aa9.82□□□□□ -0.84
TMC1-202ENST00000340019 C9orf78Q9NZ63 289 aaPredicted RBP9.82□□□□□ -0.84
TMC1-202ENST00000340019 RGL2O15211 777 aa9.81□□□□□ -0.84
TMC1-202ENST00000340019 CASP7P55210 303 aa9.81□□□□□ -0.84
TMC1-202ENST00000340019 CWC25Q9NXE8 425 aaPredicted RBP9.81□□□□□ -0.84
TMC1-202ENST00000340019 HMGB2P26583 209 aaKnown RBP9.81□□□□□ -0.84
TMC1-202ENST00000340019 KAZALD1Q96I82 304 aa9.81□□□□□ -0.84
TMC1-202ENST00000340019 ARXQ96QS3 562 aa9.81□□□□□ -0.84
TMC1-202ENST00000340019 RTCBQ9Y3I0 505 aaKnown RBP9.81□□□□□ -0.84
TMC1-202ENST00000340019 H7C1W4 665 aa9.81□□□□□ -0.84
TMC1-202ENST00000340019 ZNF34Q8IZ26 560 aa9.81□□□□□ -0.84
TMC1-202ENST00000340019 SMIM5Q71RC9 77 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 SMC5Q8IY18 1101 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 AK7Q96M32 723 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 ATP8B2P98198 1209 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 NLRP10Q86W26 655 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 SUCLG2Q96I99 432 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 NARFQ9UHQ1 456 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 HDAC5Q9UQL6 1122 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 TUBGCP6Q96RT7 1819 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 UBN2Q6ZU65 1347 aa9.8□□□□□ -0.84
TMC1-202ENST00000340019 MTX1Q13505 466 aa9.79□□□□□ -0.84
TMC1-202ENST00000340019 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms