RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 STAP2Q9UGK3 403 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 CLTCQ00610 1675 aaKnown RBP19.28■□□□□ 0.68
SCARB1-202ENST00000339570 LIG1P18858 919 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 PTGS1P23219 599 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 CDC37L1Q7L3B6 337 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 PIP4K2AP48426 406 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-202ENST00000339570 LRMPQ12912 555 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 SSH3Q8TE77 659 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 PIBF1Q8WXW3 757 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
SCARB1-202ENST00000339570 CYP46A1Q9Y6A2 500 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 LRRC2Q9BYS8 371 aa19.27■□□□□ 0.68
SCARB1-202ENST00000339570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-202ENST00000339570 NEO1Q92859 1461 aa19.27■□□□□ 0.68
SCARB1-202ENST00000339570 CHGBP05060 677 aa19.27■□□□□ 0.68
SCARB1-202ENST00000339570 C16orf45Q96MC5 204 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-202ENST00000339570 HDGFP51858 240 aaKnown RBP19.27■□□□□ 0.67
SCARB1-202ENST00000339570 TEFQ10587 303 aa19.27■□□□□ 0.67
SCARB1-202ENST00000339570 DNAAF4Q8WXU2 420 aa19.27■□□□□ 0.67
SCARB1-202ENST00000339570 NRBP1Q9UHY1 535 aa19.27■□□□□ 0.67
SCARB1-202ENST00000339570 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
SCARB1-202ENST00000339570 HYPKQ9NX55 129 aa19.26■□□□□ 0.67
SCARB1-202ENST00000339570 MTMR6Q9Y217 621 aa19.26■□□□□ 0.67
SCARB1-202ENST00000339570 MYRIPQ8NFW9 859 aa19.26■□□□□ 0.67
SCARB1-202ENST00000339570 TTC14Q96N46 770 aa19.26■□□□□ 0.67
SCARB1-202ENST00000339570 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
SCARB1-202ENST00000339570 ZNF710Q8N1W2 664 aa19.25■□□□□ 0.67
SCARB1-202ENST00000339570 TLR7Q9NYK1 1049 aaKnown RBP19.25■□□□□ 0.67
SCARB1-202ENST00000339570 TPCN1Q9ULQ1 816 aa19.25■□□□□ 0.67
SCARB1-202ENST00000339570 RBM8AQ9Y5S9 174 aaKnown RBP19.25■□□□□ 0.67
SCARB1-202ENST00000339570 CEP170BQ9Y4F5 1589 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-202ENST00000339570 BICD2Q8TD16 824 aa19.25■□□□□ 0.67
SCARB1-202ENST00000339570 KIF3AQ9Y496 699 aa19.25■□□□□ 0.67
SCARB1-202ENST00000339570 FLT4P35916 1363 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 DLC1Q96QB1 1528 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 ZKSCAN1P17029 563 aaPredicted RBP19.24■□□□□ 0.67
SCARB1-202ENST00000339570 HOXC9P31274 260 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 TTC6Q86TZ1 520 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 MAP7D2Q96T17 732 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 KCNF1Q9H3M0 494 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 MAP3K2Q9Y2U5 619 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 ATP6V1DQ9Y5K8 247 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 FAM184AQ8NB25 1140 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 FSD1Q9BTV5 496 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 TRIM5Q9C035 493 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 DACT1Q9NYF0 836 aa19.24■□□□□ 0.67
SCARB1-202ENST00000339570 HSP90B1P14625 803 aaKnown RBP19.23■□□□□ 0.67
SCARB1-202ENST00000339570 USP6P35125 1406 aa19.23■□□□□ 0.67
SCARB1-202ENST00000339570 RIOK3O14730 519 aaKnown RBP19.23■□□□□ 0.67
SCARB1-202ENST00000339570 NMIQ13287 307 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-202ENST00000339570 NAA30Q147X3 362 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-202ENST00000339570 ERCC4Q92889 916 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-202ENST00000339570 BCL2L12Q9HB09 334 aa19.23■□□□□ 0.67
SCARB1-202ENST00000339570 TERF1P54274 439 aa19.23■□□□□ 0.67
SCARB1-202ENST00000339570 FGD1P98174 961 aa19.23■□□□□ 0.67
SCARB1-202ENST00000339570 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-202ENST00000339570 CCDC186Q7Z3E2 898 aa19.23■□□□□ 0.67
SCARB1-202ENST00000339570 REREQ9P2R6 1566 aa19.22■□□□□ 0.67
SCARB1-202ENST00000339570 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
SCARB1-202ENST00000339570 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
SCARB1-202ENST00000339570 MYL6BP14649 208 aa19.22■□□□□ 0.67
SCARB1-202ENST00000339570 GLRX3O76003 335 aaKnown RBP19.22■□□□□ 0.67
SCARB1-202ENST00000339570 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.673e-14■■■■□ 21.3
SCARB1-202ENST00000339570 ANO6Q4KMQ2 910 aa19.22■□□□□ 0.67
SCARB1-202ENST00000339570 NUP62CLQ9H1M0 184 aa19.22■□□□□ 0.67
SCARB1-202ENST00000339570 NPHP1O15259 732 aa19.21■□□□□ 0.67
SCARB1-202ENST00000339570 ST3GAL1Q11201 340 aa19.21■□□□□ 0.67
SCARB1-202ENST00000339570 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
SCARB1-202ENST00000339570 TNMDQ9H2S6 317 aa19.21■□□□□ 0.67
SCARB1-202ENST00000339570 LARP1Q6PKG0 1096 aaKnown RBP19.21■□□□□ 0.67
SCARB1-202ENST00000339570 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
SCARB1-202ENST00000339570 RUFY2Q8WXA3 655 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 IGSF1Q8N6C5 1336 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 PLEKHG3A1L390 1219 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 JAK2O60674 1132 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 CREB3L3Q68CJ9 461 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 ECHDC1Q9NTX5 307 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.2■□□□□ 0.663e-7■□□□□ 9.2
SCARB1-202ENST00000339570 V9GYY5 206 aaPredicted RBP19.2■□□□□ 0.66
SCARB1-202ENST00000339570 SPATA32Q96LK8 384 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 DNAJC25Q9H1X3 360 aa19.2■□□□□ 0.66
SCARB1-202ENST00000339570 KRT85P78386 507 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 MAP3K11Q16584 847 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 BEND3Q5T5X7 828 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 MAP3K5Q99683 1374 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 OVOS2A0A0J9YW53 1432 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 OVOS2Q6IE36 1432 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 A0A0D9SFI3 127 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 TYRO3Q06418 890 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 NBPF6Q5VWK0 638 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 CCDC129Q6ZRS4 1044 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 NBPF4Q96M43 638 aa19.19■□□□□ 0.66
SCARB1-202ENST00000339570 GUCY1B3Q02153 619 aa19.18■□□□□ 0.66
SCARB1-202ENST00000339570 UVSSAQ2YD98 709 aa19.18■□□□□ 0.66
SCARB1-202ENST00000339570 DNAJC2Q99543 621 aaKnown RBP19.18■□□□□ 0.66
SCARB1-202ENST00000339570 CCDC94Q9BW85 323 aaPredicted RBP19.18■□□□□ 0.66
SCARB1-202ENST00000339570 SBNO1A3KN83 1393 aa19.18■□□□□ 0.66
SCARB1-202ENST00000339570 ARHGEF10O15013 1369 aa19.18■□□□□ 0.66
SCARB1-202ENST00000339570 G3BP1Q13283 466 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCARB1-202ENST00000339570 SLFNL1Q499Z3 407 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms