RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DDB1Q16531 1140 aa19.95■□□□□ 0.78
LITAF-201ENST00000339430 BARGINQ6ZT62 677 aa19.95■□□□□ 0.78
LITAF-201ENST00000339430 PXDNLA1KZ92 1463 aa19.94■□□□□ 0.78
LITAF-201ENST00000339430 ST18O60284 1047 aa19.94■□□□□ 0.78
LITAF-201ENST00000339430 GIGYF1O75420 1035 aaPredicted RBP19.94■□□□□ 0.78
LITAF-201ENST00000339430 TTC5Q8N0Z6 440 aa19.94■□□□□ 0.78
LITAF-201ENST00000339430 TNS2Q63HR2 1409 aa19.94■□□□□ 0.78
LITAF-201ENST00000339430 HOXB7P09629 217 aa19.94■□□□□ 0.78
LITAF-201ENST00000339430 FAM98CQ17RN3 349 aaKnown RBP19.94■□□□□ 0.78
LITAF-201ENST00000339430 SRCIN1Q9C0H9 1055 aa19.94■□□□□ 0.78
LITAF-201ENST00000339430 HEG1Q9ULI3 1381 aa19.94■□□□□ 0.78
LITAF-201ENST00000339430 PRAMEF22A3QJZ6 481 aa19.93■□□□□ 0.78
LITAF-201ENST00000339430 ZNF496Q96IT1 587 aaPredicted RBP19.93■□□□□ 0.78
LITAF-201ENST00000339430 TOGARAM1Q9Y4F4 1720 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 PKP1Q13835 747 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 PPP1R42Q7Z4L9 355 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 NUTM1Q86Y26 1132 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 ZGPATQ8N5A5 531 aaKnown RBP19.92■□□□□ 0.78
LITAF-201ENST00000339430 ESYT1Q9BSJ8 1104 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 AFF2P51816 1311 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 PI4KAP2A4QPH2 592 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 NBPF7P0C2Y1 421 aaPredicted RBP19.92■□□□□ 0.78
LITAF-201ENST00000339430 PI4KAP1Q8N8J0 262 aa19.92■□□□□ 0.78
LITAF-201ENST00000339430 SURF6O75683 361 aaKnown RBP19.91■□□□□ 0.78
LITAF-201ENST00000339430 BAG4O95429 457 aaKnown RBP19.91■□□□□ 0.78
LITAF-201ENST00000339430 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
LITAF-201ENST00000339430 TMOD3Q9NYL9 352 aa19.91■□□□□ 0.78
LITAF-201ENST00000339430 MAP4K4O95819 1239 aaPredicted RBP19.9■□□□□ 0.78
LITAF-201ENST00000339430 CHMLP26374 656 aa19.9■□□□□ 0.78
LITAF-201ENST00000339430 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.9■□□□□ 0.78
LITAF-201ENST00000339430 ANO2Q9NQ90 1003 aa19.9■□□□□ 0.78
LITAF-201ENST00000339430 SRGAP3O43295 1099 aa19.89■□□□□ 0.77
LITAF-201ENST00000339430 DNAAF4Q8WXU2 420 aa19.89■□□□□ 0.77
LITAF-201ENST00000339430 FMNL2Q96PY5 1086 aa19.89■□□□□ 0.77
LITAF-201ENST00000339430 NEK4P51957 841 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 MARCH10Q8NA82 808 aaPredicted RBP19.88■□□□□ 0.77
LITAF-201ENST00000339430 GRPEL1Q9HAV7 217 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 STAP2Q9UGK3 403 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 PALD1Q9ULE6 856 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 A0A0G2JS52 829 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 GOLGA6L22H0YM25 854 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 SKOR2Q2VWA4 1001 aaPredicted RBP19.88■□□□□ 0.77
LITAF-201ENST00000339430 FAM43AQ8N2R8 423 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 CHMP4AQ9BY43 222 aa19.88■□□□□ 0.77
LITAF-201ENST00000339430 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
LITAF-201ENST00000339430 MRE11P49959 708 aa19.87■□□□□ 0.77
LITAF-201ENST00000339430 BEND3Q5T5X7 828 aa19.87■□□□□ 0.77
LITAF-201ENST00000339430 MCTP1Q6DN14 999 aa19.87■□□□□ 0.77
LITAF-201ENST00000339430 PIGBQ92521 554 aa19.87■□□□□ 0.77
LITAF-201ENST00000339430 GAS2L3Q86XJ1 694 aa19.87■□□□□ 0.77
LITAF-201ENST00000339430 SYTL4Q96C24 671 aaPredicted RBP19.87■□□□□ 0.77
LITAF-201ENST00000339430 NUCB2P80303 420 aa19.86■□□□□ 0.77
LITAF-201ENST00000339430 SNRPA1P09661 255 aaKnown RBP19.86■□□□□ 0.77
LITAF-201ENST00000339430 PTMSP20962 102 aa19.86■□□□□ 0.77
LITAF-201ENST00000339430 POLA2Q14181 598 aa19.86■□□□□ 0.77
LITAF-201ENST00000339430 NOL8Q76FK4 1167 aaKnown RBP19.86■□□□□ 0.77
LITAF-201ENST00000339430 RHPN1Q8TCX5 695 aa19.86■□□□□ 0.77
LITAF-201ENST00000339430 C5P01031 1676 aa19.86■□□□□ 0.77
LITAF-201ENST00000339430 PTCD1O75127 700 aaKnown RBP19.85■□□□□ 0.77
LITAF-201ENST00000339430 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
LITAF-201ENST00000339430 IL25Q9H293 177 aa19.85■□□□□ 0.77
LITAF-201ENST00000339430 ADCY9O60503 1353 aa19.85■□□□□ 0.77
LITAF-201ENST00000339430 ITGB4P16144 1822 aa19.85■□□□□ 0.77
LITAF-201ENST00000339430 CYP2E1P05181 493 aaPredicted RBP19.85■□□□□ 0.77
LITAF-201ENST00000339430 PRIM1P49642 420 aaKnown RBP19.85■□□□□ 0.77
LITAF-201ENST00000339430 CLEC17AQ6ZS10 378 aa19.85■□□□□ 0.77
LITAF-201ENST00000339430 DBF4Q9UBU7 674 aaPredicted RBP19.85■□□□□ 0.77
LITAF-201ENST00000339430 DDX49Q9Y6V7 483 aaKnown RBP19.85■□□□□ 0.77
LITAF-201ENST00000339430 PROSER3Q2NL68 480 aa19.84■□□□□ 0.77
LITAF-201ENST00000339430 ASAP1Q9ULH1 1129 aa19.84■□□□□ 0.77
LITAF-201ENST00000339430 USP16Q9Y5T5 823 aa19.84■□□□□ 0.77
LITAF-201ENST00000339430 RAB11FIP3O75154 756 aa19.84■□□□□ 0.77
LITAF-201ENST00000339430 MCCP23508 829 aa19.84■□□□□ 0.77
LITAF-201ENST00000339430 CWC22Q9HCG8 908 aaKnown RBP19.84■□□□□ 0.77
LITAF-201ENST00000339430 PAPPAQ13219 1627 aa19.84■□□□□ 0.77
LITAF-201ENST00000339430 TRPC5Q9UL62 973 aaPredicted RBP19.83■□□□□ 0.77
LITAF-201ENST00000339430 BCL9O00512 1426 aa19.83■□□□□ 0.76
LITAF-201ENST00000339430 GLI3P10071 1580 aa19.83■□□□□ 0.76
LITAF-201ENST00000339430 FOXD4L5Q5VV16 416 aaPredicted RBP19.83■□□□□ 0.76
LITAF-201ENST00000339430 FOXD4L4Q8WXT5 416 aaPredicted RBP19.83■□□□□ 0.76
LITAF-201ENST00000339430 ACSBG1Q96GR2 724 aa19.83■□□□□ 0.76
LITAF-201ENST00000339430 TMX3Q96JJ7 454 aa19.83■□□□□ 0.76
LITAF-201ENST00000339430 RRAGDQ9NQL2 400 aaPredicted RBP19.83■□□□□ 0.76
LITAF-201ENST00000339430 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.76
LITAF-201ENST00000339430 UBR2Q8IWV8 1755 aa19.82■□□□□ 0.76
LITAF-201ENST00000339430 DOT1LQ8TEK3 1739 aa19.82■□□□□ 0.76
LITAF-201ENST00000339430 CHAMP1Q96JM3 812 aa19.82■□□□□ 0.76
LITAF-201ENST00000339430 MAP3K2Q9Y2U5 619 aa19.82■□□□□ 0.76
LITAF-201ENST00000339430 PI4K2BQ8TCG2 481 aa19.81■□□□□ 0.76
LITAF-201ENST00000339430 KIF1BPQ96EK5 621 aa19.81■□□□□ 0.76
LITAF-201ENST00000339430 ATG3Q9NT62 314 aa19.81■□□□□ 0.76
LITAF-201ENST00000339430 ZDHHC9Q9Y397 364 aa19.81■□□□□ 0.76
LITAF-201ENST00000339430 AOX1Q06278 1338 aa19.81■□□□□ 0.76
LITAF-201ENST00000339430 OS9Q13438 667 aaPredicted RBP19.81■□□□□ 0.76
LITAF-201ENST00000339430 ATRNO75882 1429 aa19.81■□□□□ 0.76
LITAF-201ENST00000339430 NCLP19338 710 aaKnown RBP19.8■□□□□ 0.76
LITAF-201ENST00000339430 UPF3BQ9BZI7 483 aaKnown RBP19.8■□□□□ 0.76
LITAF-201ENST00000339430 QTRT2Q9H974 415 aaKnown RBP19.8■□□□□ 0.76
LITAF-201ENST00000339430 PDIA6Q15084 440 aa19.8■□□□□ 0.76
LITAF-201ENST00000339430 KLHL40Q2TBA0 621 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms