RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 NIP7Q9Y221 180 aaKnown RBP eCLIP25.67■■□□□ 1.7
ITGA4-202ENST00000339307 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
ITGA4-202ENST00000339307 APLP1P51693 650 aa25.66■■□□□ 1.7
ITGA4-202ENST00000339307 CNKSR1Q969H4 720 aa25.66■■□□□ 1.7
ITGA4-202ENST00000339307 DLG5Q8TDM6 1919 aa25.66■■□□□ 1.7
ITGA4-202ENST00000339307 NFKBIEO00221 500 aa25.65■■□□□ 1.7
ITGA4-202ENST00000339307 PRELPP51888 382 aa25.65■■□□□ 1.7
ITGA4-202ENST00000339307 RBM46Q8TBY0 533 aaKnown RBP25.65■■□□□ 1.7
ITGA4-202ENST00000339307 GTF2E1P29083 439 aaPredicted RBP25.64■■□□□ 1.7
ITGA4-202ENST00000339307 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.7
ITGA4-202ENST00000339307 TPTE2Q6XPS3 522 aa25.64■■□□□ 1.7
ITGA4-202ENST00000339307 RRP7AQ9Y3A4 280 aaKnown RBP25.64■■□□□ 1.7
ITGA4-202ENST00000339307 RALBP1Q15311 655 aa25.63■■□□□ 1.69
ITGA4-202ENST00000339307 STYK1Q6J9G0 422 aa25.63■■□□□ 1.69
ITGA4-202ENST00000339307 MASTLQ96GX5 879 aa25.63■■□□□ 1.69
ITGA4-202ENST00000339307 ZC3H4Q9UPT8 1303 aaKnown RBP25.63■■□□□ 1.69
ITGA4-202ENST00000339307 COL11A2P13942 1736 aaPredicted RBP25.63■■□□□ 1.69
ITGA4-202ENST00000339307 SRGNP10124 158 aa25.63■■□□□ 1.69
ITGA4-202ENST00000339307 CEP350Q5VT06 3117 aa25.62■■□□□ 1.69
ITGA4-202ENST00000339307 MYL6BP14649 208 aa25.62■■□□□ 1.69
ITGA4-202ENST00000339307 EIF4A1P60842 406 aaKnown RBP25.62■■□□□ 1.69
ITGA4-202ENST00000339307 HLFQ16534 295 aa25.62■■□□□ 1.69
ITGA4-202ENST00000339307 PRPF40BQ6NWY9 871 aaKnown RBP25.62■■□□□ 1.69
ITGA4-202ENST00000339307 CCDC88AQ3V6T2 1871 aa25.61■■□□□ 1.69
ITGA4-202ENST00000339307 GLTPD2A6NH11 291 aa25.61■■□□□ 1.69
ITGA4-202ENST00000339307 ERFEQ4G0M1 354 aa25.61■■□□□ 1.69
ITGA4-202ENST00000339307 RIPK4P57078 832 aa25.6■■□□□ 1.69
ITGA4-202ENST00000339307 DPY19L2Q6NUT2 758 aa25.6■■□□□ 1.69
ITGA4-202ENST00000339307 TAOK3Q9H2K8 898 aa25.6■■□□□ 1.69
ITGA4-202ENST00000339307 CACNA1SQ13698 1873 aa25.59■■□□□ 1.69
ITGA4-202ENST00000339307 KIF6Q6ZMV9 814 aa25.59■■□□□ 1.69
ITGA4-202ENST00000339307 TSPYL4Q9UJ04 414 aa25.59■■□□□ 1.69
ITGA4-202ENST00000339307 TNRC6CQ9HCJ0 1690 aaKnown RBP25.59■■□□□ 1.69
ITGA4-202ENST00000339307 VEGFAP15692 232 aaPredicted RBP25.58■■□□□ 1.69
ITGA4-202ENST00000339307 FSTL1Q12841 308 aa25.58■■□□□ 1.69
ITGA4-202ENST00000339307 LAMB4A4D0S4 1761 aa25.57■■□□□ 1.68
ITGA4-202ENST00000339307 NPR1P16066 1061 aa25.57■■□□□ 1.68
ITGA4-202ENST00000339307 SOGA3Q5TF21 947 aa25.57■■□□□ 1.68
ITGA4-202ENST00000339307 KDM3BQ7LBC6 1761 aa25.57■■□□□ 1.68
ITGA4-202ENST00000339307 SMC1BQ8NDV3 1235 aa25.56■■□□□ 1.68
ITGA4-202ENST00000339307 TIAM2Q8IVF5 1701 aa25.56■■□□□ 1.68
ITGA4-202ENST00000339307 SLX4Q8IY92 1834 aa25.56■■□□□ 1.68
ITGA4-202ENST00000339307 NEUROD2Q15784 382 aa25.55■■□□□ 1.68
ITGA4-202ENST00000339307 TTLL7Q6ZT98 887 aa25.55■■□□□ 1.68
ITGA4-202ENST00000339307 ZBTB3Q9H5J0 574 aa25.55■■□□□ 1.68
ITGA4-202ENST00000339307 RGL2O15211 777 aa25.54■■□□□ 1.68
ITGA4-202ENST00000339307 EIF2S2P20042 333 aaKnown RBP25.54■■□□□ 1.68
ITGA4-202ENST00000339307 HTRA3P83110 453 aa25.54■■□□□ 1.68
ITGA4-202ENST00000339307 CCDC146Q8IYE0 955 aa25.54■■□□□ 1.68
ITGA4-202ENST00000339307 MAP3K15Q6ZN16 1313 aa25.54■■□□□ 1.68
ITGA4-202ENST00000339307 MYBBP1AQ9BQG0 1328 aaKnown RBP25.53■■□□□ 1.68
ITGA4-202ENST00000339307 ERVV-1B6SEH8 477 aa25.53■■□□□ 1.68
ITGA4-202ENST00000339307 GPTP24298 496 aa25.53■■□□□ 1.68
ITGA4-202ENST00000339307 NUTM1Q86Y26 1132 aa25.53■■□□□ 1.68
ITGA4-202ENST00000339307 NYXQ9GZU5 481 aa25.53■■□□□ 1.68
ITGA4-202ENST00000339307 TMPOP42166 694 aaKnown RBP25.52■■□□□ 1.68
ITGA4-202ENST00000339307 LMOD3Q0VAK6 560 aa25.52■■□□□ 1.68
ITGA4-202ENST00000339307 CCDC93Q567U6 631 aa25.52■■□□□ 1.68
ITGA4-202ENST00000339307 FER1L6Q2WGJ9 1857 aa25.52■■□□□ 1.68
ITGA4-202ENST00000339307 LTBP3Q9NS15 1303 aa25.51■■□□□ 1.67
ITGA4-202ENST00000339307 WDR43Q15061 677 aaKnown RBP eCLIP25.51■■□□□ 1.67
ITGA4-202ENST00000339307 ALDH1B1P30837 517 aa25.5■■□□□ 1.67
ITGA4-202ENST00000339307 LAS1LQ9Y4W2 734 aaKnown RBP25.5■■□□□ 1.67
ITGA4-202ENST00000339307 NECTIN2Q92692 538 aa25.49■■□□□ 1.67
ITGA4-202ENST00000339307 KLRG2A4D1S0 409 aaPredicted RBP25.48■■□□□ 1.67
ITGA4-202ENST00000339307 OLFM4Q6UX06 510 aa25.48■■□□□ 1.67
ITGA4-202ENST00000339307 DNAJC5GQ8N7S2 189 aa25.48■■□□□ 1.67
ITGA4-202ENST00000339307 DDNO94850 711 aaPredicted RBP25.47■■□□□ 1.67
ITGA4-202ENST00000339307 C7orf43Q8WVR3 580 aa25.47■■□□□ 1.67
ITGA4-202ENST00000339307 WDR90Q96KV7 1748 aa25.47■■□□□ 1.67
ITGA4-202ENST00000339307 RPGRQ92834 1020 aaKnown RBP25.46■■□□□ 1.67
ITGA4-202ENST00000339307 ZNF277Q9NRM2 450 aaPredicted RBP25.46■■□□□ 1.67
ITGA4-202ENST00000339307 ARFGEF2Q9Y6D5 1785 aa25.46■■□□□ 1.67
ITGA4-202ENST00000339307 NUP98P52948 1817 aa25.46■■□□□ 1.67
ITGA4-202ENST00000339307 ERBB4Q15303 1308 aa25.46■■□□□ 1.67
ITGA4-202ENST00000339307 DICER1Q9UPY3 1922 aaKnown RBP25.46■■□□□ 1.67
ITGA4-202ENST00000339307 ANXA1P04083 346 aa25.46■■□□□ 1.67
ITGA4-202ENST00000339307 FKBP4Q02790 459 aaKnown RBP eCLIP25.46■■□□□ 1.67
ITGA4-202ENST00000339307 SUSD4Q5VX71 490 aa25.46■■□□□ 1.67
ITGA4-202ENST00000339307 RTKN2Q8IZC4 609 aa25.46■■□□□ 1.67
ITGA4-202ENST00000339307 POTECB2RU33 542 aa25.45■■□□□ 1.66
ITGA4-202ENST00000339307 ABCC12Q96J65 1359 aa25.45■■□□□ 1.66
ITGA4-202ENST00000339307 GIGYF2Q6Y7W6 1299 aaKnown RBP25.44■■□□□ 1.66
ITGA4-202ENST00000339307 RUNDC1Q96C34 613 aa25.44■■□□□ 1.66
ITGA4-202ENST00000339307 BABAM1Q9NWV8 329 aa25.44■■□□□ 1.66
ITGA4-202ENST00000339307 UBN2Q6ZU65 1347 aa25.43■■□□□ 1.66
ITGA4-202ENST00000339307 AIMP1Q12904 312 aaKnown RBP25.43■■□□□ 1.66
ITGA4-202ENST00000339307 PPP1R42Q7Z4L9 355 aa25.43■■□□□ 1.66
ITGA4-202ENST00000339307 TCERG1O14776 1098 aaKnown RBP25.42■■□□□ 1.66
ITGA4-202ENST00000339307 PROSER3Q2NL68 480 aa25.42■■□□□ 1.66
ITGA4-202ENST00000339307 ZNF34Q8IZ26 560 aa25.42■■□□□ 1.66
ITGA4-202ENST00000339307 KLRG1Q96E93 195 aa25.42■■□□□ 1.66
ITGA4-202ENST00000339307 SYNE4Q8N205 404 aa25.41■■□□□ 1.66
ITGA4-202ENST00000339307 PDIA6Q15084 440 aa25.4■■□□□ 1.66
ITGA4-202ENST00000339307 CRY2Q49AN0 593 aa25.4■■□□□ 1.66
ITGA4-202ENST00000339307 RBM17Q96I25 401 aaKnown RBP25.4■■□□□ 1.66
ITGA4-202ENST00000339307 ADAMTS8Q9UP79 889 aa25.4■■□□□ 1.66
ITGA4-202ENST00000339307 PARP10Q53GL7 1025 aa25.39■■□□□ 1.66
ITGA4-202ENST00000339307 KRT24Q2M2I5 525 aa25.38■■□□□ 1.65
ITGA4-202ENST00000339307 COPS6Q7L5N1 327 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms