RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
NUDCD3-201ENST00000338427 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
NUDCD3-201ENST00000338427 SBF1O95248 1867 aa17.65■□□□□ 0.42
NUDCD3-201ENST00000338427 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.41
NUDCD3-201ENST00000338427 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
NUDCD3-201ENST00000338427 SRGNP10124 158 aa17.63■□□□□ 0.41
NUDCD3-201ENST00000338427 HSPA6P17066 643 aa17.63■□□□□ 0.41
NUDCD3-201ENST00000338427 SCN7AQ01118 1682 aa17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 ANXA1P04083 346 aa17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 LMNB1P20700 586 aa17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 ST5P78524 1137 aa17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 NECTIN2Q92692 538 aa17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
NUDCD3-201ENST00000338427 CEP350Q5VT06 3117 aa17.61■□□□□ 0.41
NUDCD3-201ENST00000338427 TOMM70O94826 608 aa17.61■□□□□ 0.41
NUDCD3-201ENST00000338427 OLFM4Q6UX06 510 aa17.61■□□□□ 0.41
NUDCD3-201ENST00000338427 GPTP24298 496 aa17.6■□□□□ 0.41
NUDCD3-201ENST00000338427 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
NUDCD3-201ENST00000338427 TPTE2Q6XPS3 522 aa17.6■□□□□ 0.41
NUDCD3-201ENST00000338427 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
NUDCD3-201ENST00000338427 MASTLQ96GX5 879 aa17.6■□□□□ 0.41
NUDCD3-201ENST00000338427 ZBTB3Q9H5J0 574 aa17.6■□□□□ 0.41
NUDCD3-201ENST00000338427 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
NUDCD3-201ENST00000338427 CCDC88AQ3V6T2 1871 aa17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 PDIA6Q15084 440 aa17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 PROSER3Q2NL68 480 aa17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 STYK1Q6J9G0 422 aa17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
NUDCD3-201ENST00000338427 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 HTRA3P83110 453 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 C7orf43Q8WVR3 580 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 CNKSR1Q969H4 720 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 BCORQ6W2J9 1755 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 DLEC1Q9Y238 1755 aa17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.4
NUDCD3-201ENST00000338427 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
NUDCD3-201ENST00000338427 GTF2E1P29083 439 aaPredicted RBP17.57■□□□□ 0.4
NUDCD3-201ENST00000338427 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
NUDCD3-201ENST00000338427 SUSD4Q5VX71 490 aa17.57■□□□□ 0.4
NUDCD3-201ENST00000338427 LRP10Q7Z4F1 713 aa17.57■□□□□ 0.4
NUDCD3-201ENST00000338427 RUNDC1Q96C34 613 aa17.57■□□□□ 0.4
NUDCD3-201ENST00000338427 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
NUDCD3-201ENST00000338427 KLRG2A4D1S0 409 aaPredicted RBP17.56■□□□□ 0.4
NUDCD3-201ENST00000338427 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
NUDCD3-201ENST00000338427 POTECB2RU33 542 aa17.56■□□□□ 0.4
NUDCD3-201ENST00000338427 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
NUDCD3-201ENST00000338427 WDR43Q15061 677 aaKnown RBP eCLIP17.56■□□□□ 0.4
NUDCD3-201ENST00000338427 SLC51AQ86UW1 340 aa17.56■□□□□ 0.4
NUDCD3-201ENST00000338427 ZNF428Q96B54 188 aa17.56■□□□□ 0.4
NUDCD3-201ENST00000338427 NPR1P16066 1061 aa17.55■□□□□ 0.4
NUDCD3-201ENST00000338427 KIF6Q6ZMV9 814 aa17.55■□□□□ 0.4
NUDCD3-201ENST00000338427 C16orf71Q8IYS4 520 aaPredicted RBP17.55■□□□□ 0.4
NUDCD3-201ENST00000338427 UBN2Q6ZU65 1347 aa17.54■□□□□ 0.4
NUDCD3-201ENST00000338427 CHL1O00533 1208 aa17.54■□□□□ 0.4
NUDCD3-201ENST00000338427 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
NUDCD3-201ENST00000338427 CCDC184Q52MB2 194 aa17.54■□□□□ 0.4
NUDCD3-201ENST00000338427 ZNF34Q8IZ26 560 aa17.54■□□□□ 0.4
NUDCD3-201ENST00000338427 RBM46Q8TBY0 533 aaKnown RBP17.54■□□□□ 0.4
NUDCD3-201ENST00000338427 CACNA1SQ13698 1873 aa17.53■□□□□ 0.4
NUDCD3-201ENST00000338427 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
NUDCD3-201ENST00000338427 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
NUDCD3-201ENST00000338427 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
NUDCD3-201ENST00000338427 RGL2O15211 777 aa17.52■□□□□ 0.4
NUDCD3-201ENST00000338427 DDNO94850 711 aaPredicted RBP17.52■□□□□ 0.4
NUDCD3-201ENST00000338427 GIGYF2Q6Y7W6 1299 aaKnown RBP17.52■□□□□ 0.4
NUDCD3-201ENST00000338427 COPS6Q7L5N1 327 aa17.52■□□□□ 0.4
NUDCD3-201ENST00000338427 DNAJC5GQ8N7S2 189 aa17.52■□□□□ 0.4
NUDCD3-201ENST00000338427 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.4
NUDCD3-201ENST00000338427 NUP98P52948 1817 aa17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 SYNE4Q8N205 404 aa17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 XAGE3Q8WTP9 111 aa17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 BABAM1Q9NWV8 329 aa17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
NUDCD3-201ENST00000338427 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
NUDCD3-201ENST00000338427 APAF1O14727 1248 aa17.5■□□□□ 0.39
NUDCD3-201ENST00000338427 NTSR2O95665 410 aa17.49■□□□□ 0.39
NUDCD3-201ENST00000338427 APLP1P51693 650 aa17.49■□□□□ 0.39
NUDCD3-201ENST00000338427 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
NUDCD3-201ENST00000338427 NYXQ9GZU5 481 aa17.49■□□□□ 0.39
NUDCD3-201ENST00000338427 LTBP3Q9NS15 1303 aa17.48■□□□□ 0.39
NUDCD3-201ENST00000338427 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
NUDCD3-201ENST00000338427 CCDC93Q567U6 631 aa17.48■□□□□ 0.39
NUDCD3-201ENST00000338427 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
NUDCD3-201ENST00000338427 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
NUDCD3-201ENST00000338427 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
NUDCD3-201ENST00000338427 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
NUDCD3-201ENST00000338427 TNRC6CQ9HCJ0 1690 aaKnown RBP17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 POTEIP0CG38 1075 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms