RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 NRDCO43847 1150 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 DHX16O60231 1041 aaKnown RBP7.7□□□□□ -1.18
HMG20A-201ENST00000336216 AKAP17AQ02040 695 aaKnown RBP7.7□□□□□ -1.18
HMG20A-201ENST00000336216 SYNE3Q6ZMZ3 975 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 SDF4Q9BRK5 362 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 LRRC2Q9BYS8 371 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 ABCF2Q9UG63 623 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 KIF3AQ9Y496 699 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 PLEKHG1Q9ULL1 1385 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 CPA1P15085 419 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 PDE1AP54750 535 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 PPP4R3BQ5MIZ7 849 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 BLOC1S2Q6QNY1 142 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 TMEM63CQ9P1W3 806 aa7.7□□□□□ -1.18
HMG20A-201ENST00000336216 CLSTN1O94985 981 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 HOXC9P31274 260 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 TTC39AQ5SRH9 613 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 VPS53Q5VIR6 699 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 NBPF6Q5VWK0 638 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 LARP1Q6PKG0 1096 aaKnown RBP7.69□□□□□ -1.18
HMG20A-201ENST00000336216 LRSAM1Q6UWE0 723 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 RHPN1Q8TCX5 695 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 NBPF4Q96M43 638 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 MPHOSPH8Q99549 860 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 LMBRD1Q9NUN5 540 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.69□□□□□ -1.18
HMG20A-201ENST00000336216 NDUFB9Q9Y6M9 179 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 IL16Q14005 1332 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 METP08581 1390 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 TTC22Q5TAA0 569 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 CEP85Q6P2H3 762 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 CPLX2Q6PUV4 134 aaKnown RBP7.69□□□□□ -1.18
HMG20A-201ENST00000336216 DDX46Q7L014 1031 aaKnown RBP7.69□□□□□ -1.18
HMG20A-201ENST00000336216 ANKRD44Q8N8A2 993 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 PDRG1Q9NUG6 133 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
HMG20A-201ENST00000336216 TBX22Q9Y458 520 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 CAMK4Q16566 473 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 AMOTQ4VCS5 1084 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 CCDC158Q5M9N0 1113 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 MTERF4Q7Z6M4 381 aaKnown RBP7.69□□□□□ -1.18
HMG20A-201ENST00000336216 ERC1Q8IUD2 1116 aa7.69□□□□□ -1.18
HMG20A-201ENST00000336216 NOL7Q9UMY1 257 aaKnown RBP7.69□□□□□ -1.18
HMG20A-201ENST00000336216 GLRX3O76003 335 aaKnown RBP7.68□□□□□ -1.18
HMG20A-201ENST00000336216 ADCY5O95622 1261 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 HAND2P61296 217 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 ANKRD13DQ6ZTN6 518 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 NECAB1Q8N987 351 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 ACSBG1Q96GR2 724 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 TMX3Q96JJ7 454 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 TMOD3Q9NYL9 352 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 IQSEC3Q9UPP2 1182 aaPredicted RBP7.68□□□□□ -1.18
HMG20A-201ENST00000336216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.68□□□□□ -1.185e-6■■□□□ 12.1
HMG20A-201ENST00000336216 PNMA6EA0A0J9YXQ4 647 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 RAB11FIP3O75154 756 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 NBPF7P0C2Y1 421 aaPredicted RBP7.68□□□□□ -1.18
HMG20A-201ENST00000336216 PSMA5P28066 241 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 PLEKHM2Q8IWE5 1019 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 KLHL34Q8N239 644 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 TMX4Q9H1E5 349 aaPredicted RBP7.68□□□□□ -1.18
HMG20A-201ENST00000336216 NSFL1CQ9UNZ2 370 aaKnown RBP7.68□□□□□ -1.18
HMG20A-201ENST00000336216 MYO3AQ8NEV4 1616 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 GOLIM4O00461 696 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 DYNC1I1O14576 645 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 SLC4A8Q2Y0W8 1093 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 PDCL2Q8N4E4 241 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 PTPRCP08575 1304 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 CCT2P78371 535 aaKnown RBP7.68□□□□□ -1.18
HMG20A-201ENST00000336216 TRIM29Q14134 588 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 LRRFIP1Q32MZ4 808 aaKnown RBP7.68□□□□□ -1.18
HMG20A-201ENST00000336216 METTL24Q5JXM2 366 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 IFNL2Q8IZJ0 200 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 PPP1R9BQ96SB3 815 aa7.68□□□□□ -1.18
HMG20A-201ENST00000336216 ARHGEF28Q8N1W1 1705 aaKnown RBP7.67□□□□□ -1.18
HMG20A-201ENST00000336216 MARCH6O60337 910 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 GIMAP6Q6P9H5 292 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 GPT2Q8TD30 523 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 ARHGAP45Q92619 1136 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 GSPT1P15170 499 aaKnown RBP7.67□□□□□ -1.18
HMG20A-201ENST00000336216 HMGN5P82970 282 aaKnown RBP7.67□□□□□ -1.18
HMG20A-201ENST00000336216 PDE4CQ08493 712 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 LMBR1LQ6UX01 489 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 USP26Q9BXU7 913 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 TRIM5Q9C035 493 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 DCTPP1Q9H773 170 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 ECHDC1Q9NTX5 307 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 TRMT112Q9UI30 125 aaKnown RBP7.67□□□□□ -1.18
HMG20A-201ENST00000336216 FER1L4A9Z1Z3 1794 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 DLC1Q96QB1 1528 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 FAM135BQ49AJ0 1406 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 NOLC1Q14978 699 aaKnown RBP eCLIP7.67□□□□□ -1.18
HMG20A-201ENST00000336216 HSP90AB3PQ58FF7 597 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 NUP133Q8WUM0 1156 aa7.67□□□□□ -1.18
HMG20A-201ENST00000336216 TULP4Q9NRJ4 1543 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 CHL1O00533 1208 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 GADD45BO75293 160 aaPredicted RBP7.66□□□□□ -1.18
HMG20A-201ENST00000336216 TBC1D2BQ9UPU7 963 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 IFIT1P09914 478 aaKnown RBP7.66□□□□□ -1.18
HMG20A-201ENST00000336216 CCDC73Q6ZRK6 1079 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 USP48Q86UV5 1035 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms