RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 XAGE3Q8WTP9 111 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
NLRP3-201ENST00000336119 CPLX2Q6PUV4 134 aaKnown RBP11.06□□□□□ -0.64
NLRP3-201ENST00000336119 CPS1P31327 1500 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 TRDNQ13061 729 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 CCDC158Q5M9N0 1113 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 SSH3Q8TE77 659 aa11.06□□□□□ -0.64
NLRP3-201ENST00000336119 ADAMTS13Q76LX8 1427 aa11.05□□□□□ -0.64
NLRP3-201ENST00000336119 XRCC6P12956 609 aaKnown RBP eCLIP11.05□□□□□ -0.64
NLRP3-201ENST00000336119 CCDC57Q2TAC2 916 aa11.05□□□□□ -0.64
NLRP3-201ENST00000336119 OSBPL3Q9H4L5 887 aa11.05□□□□□ -0.64
NLRP3-201ENST00000336119 ADAMTSL3P82987 1691 aa11.05□□□□□ -0.64
NLRP3-201ENST00000336119 CPLX1O14810 134 aa11.05□□□□□ -0.64
NLRP3-201ENST00000336119 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
NLRP3-201ENST00000336119 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
NLRP3-201ENST00000336119 NFATC2IPQ8NCF5 419 aa11.05□□□□□ -0.64
NLRP3-201ENST00000336119 ESPNB1AK53 854 aa11.04□□□□□ -0.64
NLRP3-201ENST00000336119 APPP05067 770 aa11.04□□□□□ -0.64
NLRP3-201ENST00000336119 NBPF7P0C2Y1 421 aaPredicted RBP11.04□□□□□ -0.64
NLRP3-201ENST00000336119 UBE3BQ7Z3V4 1068 aa11.04□□□□□ -0.64
NLRP3-201ENST00000336119 CCDC83Q8IWF9 413 aa11.04□□□□□ -0.64
NLRP3-201ENST00000336119 KRT85P78386 507 aa11.04□□□□□ -0.64
NLRP3-201ENST00000336119 RALYLQ86SE5 291 aaKnown RBP11.04□□□□□ -0.64
NLRP3-201ENST00000336119 INTS4Q96HW7 963 aaKnown RBP11.04□□□□□ -0.64
NLRP3-201ENST00000336119 CCDC39Q9UFE4 941 aa11.04□□□□□ -0.64
NLRP3-201ENST00000336119 PA2G4Q9UQ80 394 aaKnown RBP11.04□□□□□ -0.64
NLRP3-201ENST00000336119 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 OVOS2A0A0J9YW53 1432 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 OVOS2Q6IE36 1432 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 EPB41L2O43491 1005 aaKnown RBP11.03□□□□□ -0.64
NLRP3-201ENST00000336119 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 GTF2E1P29083 439 aaPredicted RBP11.03□□□□□ -0.64
NLRP3-201ENST00000336119 ZGPATQ8N5A5 531 aaKnown RBP11.03□□□□□ -0.64
NLRP3-201ENST00000336119 TOMM22Q9NS69 142 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 ADGRB2O60241 1585 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 TTC39AQ5SRH9 613 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
NLRP3-201ENST00000336119 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.64
NLRP3-201ENST00000336119 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.64
NLRP3-201ENST00000336119 IBTKQ9P2D0 1353 aaPredicted RBP11.02□□□□□ -0.64
NLRP3-201ENST00000336119 SYCE3A1L190 88 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 KCNQ3O43525 872 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 GOLGA6L19H0YKK7 550 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 GIGYF1O75420 1035 aaPredicted RBP11.02□□□□□ -0.65
NLRP3-201ENST00000336119 STARD3NLO95772 234 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 STK3Q13188 491 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 SIGLEC1Q9BZZ2 1709 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 TPM4P67936 248 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 SASS6Q6UVJ0 657 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.02□□□□□ -0.65
NLRP3-201ENST00000336119 SYNE3Q6ZMZ3 975 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 STAP2Q9UGK3 403 aa11.02□□□□□ -0.65
NLRP3-201ENST00000336119 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
NLRP3-201ENST00000336119 CABLES1Q8TDN4 633 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 NGLY1Q96IV0 654 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 CWC25Q9NXE8 425 aaPredicted RBP11.01□□□□□ -0.65
NLRP3-201ENST00000336119 TMOD3Q9NYL9 352 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 STX6O43752 255 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 U3KPZ7 1027 aaPredicted RBP11.01□□□□□ -0.65
NLRP3-201ENST00000336119 C3P01024 1663 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 MAP2P11137 1827 aaKnown RBP11.01□□□□□ -0.65
NLRP3-201ENST00000336119 CCDC73Q6ZRK6 1079 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 CNNM1Q9NRU3 951 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 CTNNA3Q9UI47 895 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
NLRP3-201ENST00000336119 SHPRHQ149N8 1683 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 BECN2A8MW95 431 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 SGSM2O43147 1006 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
NLRP3-201ENST00000336119 HMG20BQ9P0W2 317 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 AKAP2Q9Y2D5 859 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
NLRP3-201ENST00000336119 DDX24Q9GZR7 859 aaKnown RBP eCLIP11□□□□□ -0.65
NLRP3-201ENST00000336119 BICC1Q9H694 974 aaKnown RBP11□□□□□ -0.65
NLRP3-201ENST00000336119 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 JARID2Q92833 1246 aaPredicted RBP11□□□□□ -0.65
NLRP3-201ENST00000336119 RBM8AQ9Y5S9 174 aaKnown RBP11□□□□□ -0.65
NLRP3-201ENST00000336119 KIF20BQ96Q89 1820 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 CRB1P82279 1406 aa11□□□□□ -0.65
NLRP3-201ENST00000336119 DHX16O60231 1041 aaKnown RBP10.99□□□□□ -0.65
NLRP3-201ENST00000336119 IFIT1P09914 478 aaKnown RBP10.99□□□□□ -0.65
NLRP3-201ENST00000336119 TEX13AQ9BXU3 409 aaPredicted RBP10.99□□□□□ -0.65
NLRP3-201ENST00000336119 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 FOSBP53539 338 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 ZSCAN23Q3MJ62 389 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 FBXO41Q8TF61 875 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 METTL22Q9BUU2 404 aaPredicted RBP10.99□□□□□ -0.65
NLRP3-201ENST00000336119 PANK2Q9BZ23 570 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 CCDC34Q96HJ3 373 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 MYO5BQ9ULV0 1848 aa10.99□□□□□ -0.65
NLRP3-201ENST00000336119 CCDC192P0DO97 292 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 GJB2P29033 226 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 TRIM29Q14134 588 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 KDRP35968 1356 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms