RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 TRIM6-TRIM34B2RNG4 842 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 TULP2O00295 520 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 NEK4P51957 841 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 TSPY26PQ9H489 355 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 PHAXQ9H814 394 aaKnown RBP24.69■■□□□ 1.54
SPNS1-203ENST00000334536 CALCOCO1Q9P1Z2 691 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 KDM3BQ7LBC6 1761 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 NBPF6Q5VWK0 638 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 TSHZ3Q63HK5 1081 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 RILPL2Q969X0 211 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 SYAP1Q96A49 352 aaPredicted RBP24.69■■□□□ 1.54
SPNS1-203ENST00000334536 NBPF4Q96M43 638 aa24.69■■□□□ 1.54
SPNS1-203ENST00000334536 U2AF2P26368 475 aaKnown RBP eCLIP24.68■■□□□ 1.54
SPNS1-203ENST00000334536 CUL4AQ13619 759 aa24.68■■□□□ 1.54
SPNS1-203ENST00000334536 AKAP4Q5JQC9 854 aa24.68■■□□□ 1.54
SPNS1-203ENST00000334536 ZGPATQ8N5A5 531 aaKnown RBP24.68■■□□□ 1.54
SPNS1-203ENST00000334536 TPM3P06753 285 aa24.68■■□□□ 1.54
SPNS1-203ENST00000334536 KCNJ4P48050 445 aa24.68■■□□□ 1.54
SPNS1-203ENST00000334536 LMO7Q8WWI1 1683 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 PHF14O94880 888 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 SLFN14P0C7P3 912 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 PLEKHO1Q53GL0 409 aaPredicted RBP24.67■■□□□ 1.54
SPNS1-203ENST00000334536 PPP1R42Q7Z4L9 355 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 PLCD3Q8N3E9 789 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 TSC1Q92574 1164 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 TMX3Q96JJ7 454 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 TMEM63CQ9P1W3 806 aa24.67■■□□□ 1.54
SPNS1-203ENST00000334536 SYCE3A1L190 88 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 HSP90AB4PQ58FF6 505 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 DNAAF4Q8WXU2 420 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 INTS4Q96HW7 963 aaKnown RBP24.66■■□□□ 1.54
SPNS1-203ENST00000334536 NCAPD2Q15021 1401 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 PSME1Q06323 249 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 AMOTQ4VCS5 1084 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 KIF1BPQ96EK5 621 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 ANO2Q9NQ90 1003 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 ZDHHC9Q9Y397 364 aa24.66■■□□□ 1.54
SPNS1-203ENST00000334536 OVOS2A0A0G2JMS6 1433 aa24.65■■□□□ 1.54
SPNS1-203ENST00000334536 NPHP4O75161 1426 aaPredicted RBP24.65■■□□□ 1.54
SPNS1-203ENST00000334536 BEND3Q5T5X7 828 aa24.65■■□□□ 1.54
SPNS1-203ENST00000334536 LGR6Q9HBX8 967 aa24.65■■□□□ 1.54
SPNS1-203ENST00000334536 SURF6O75683 361 aaKnown RBP24.64■■□□□ 1.54
SPNS1-203ENST00000334536 PKP1Q13835 747 aa24.64■■□□□ 1.54
SPNS1-203ENST00000334536 RHPN1Q8TCX5 695 aa24.64■■□□□ 1.54
SPNS1-203ENST00000334536 PRPF40AO75400 957 aaKnown RBP24.64■■□□□ 1.53
SPNS1-203ENST00000334536 EIF2S2P20042 333 aaKnown RBP24.64■■□□□ 1.53
SPNS1-203ENST00000334536 TEFQ10587 303 aa24.64■■□□□ 1.53
SPNS1-203ENST00000334536 JARID2Q92833 1246 aaPredicted RBP24.64■■□□□ 1.53
SPNS1-203ENST00000334536 MORC2Q9Y6X9 1032 aaPredicted RBP24.64■■□□□ 1.53
SPNS1-203ENST00000334536 AK9Q5TCS8 1911 aa24.63■■□□□ 1.53
SPNS1-203ENST00000334536 DDX41Q9UJV9 622 aaKnown RBP24.63■■□□□ 1.53
SPNS1-203ENST00000334536 ZNF530Q6P9A1 599 aaPredicted RBP24.62■■□□□ 1.53
SPNS1-203ENST00000334536 CHPF2Q9P2E5 772 aa24.62■■□□□ 1.53
SPNS1-203ENST00000334536 IL1RAPL2Q9NP60 686 aa24.62■■□□□ 1.53
SPNS1-203ENST00000334536 RBM27Q9P2N5 1060 aaKnown RBP24.62■■□□□ 1.53
SPNS1-203ENST00000334536 ZBTB22O15209 634 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 UNC5CLQ8IV45 518 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 CTNNA3Q9UI47 895 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 PALD1Q9ULE6 856 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 HDAC5Q9UQL6 1122 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 SRGAP3O43295 1099 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 ESCO1Q5FWF5 840 aa24.61■■□□□ 1.53
SPNS1-203ENST00000334536 USP42Q9H9J4 1324 aaKnown RBP24.6■■□□□ 1.53
SPNS1-203ENST00000334536 PI4KAP2A4QPH2 592 aa24.6■■□□□ 1.53
SPNS1-203ENST00000334536 TERF2Q15554 542 aa24.6■■□□□ 1.53
SPNS1-203ENST00000334536 PI4KAP1Q8N8J0 262 aa24.6■■□□□ 1.53
SPNS1-203ENST00000334536 PI4K2BQ8TCG2 481 aa24.6■■□□□ 1.53
SPNS1-203ENST00000334536 RIOK3O14730 519 aaKnown RBP24.59■■□□□ 1.53
SPNS1-203ENST00000334536 HSPA4P34932 840 aa24.59■■□□□ 1.53
SPNS1-203ENST00000334536 MTX1Q13505 466 aa24.59■■□□□ 1.53
SPNS1-203ENST00000334536 NUTM1Q86Y26 1132 aa24.59■■□□□ 1.53
SPNS1-203ENST00000334536 YY1AP1Q9H869 796 aa24.59■■□□□ 1.53
SPNS1-203ENST00000334536 DBF4Q9UBU7 674 aaPredicted RBP24.59■■□□□ 1.53
SPNS1-203ENST00000334536 SLIT3O75094 1523 aa24.59■■□□□ 1.53
SPNS1-203ENST00000334536 RNMTO43148 476 aaKnown RBP24.59■■□□□ 1.53
SPNS1-203ENST00000334536 ALDH1L1O75891 902 aa24.59■■□□□ 1.53
SPNS1-203ENST00000334536 BRD1O95696 1058 aa24.59■■□□□ 1.53
SPNS1-203ENST00000334536 KDM4FA0A1W2PPD8 638 aa24.58■■□□□ 1.53
SPNS1-203ENST00000334536 NBPF7P0C2Y1 421 aaPredicted RBP24.58■■□□□ 1.53
SPNS1-203ENST00000334536 ARHGEF25Q86VW2 580 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 CNTROBQ8N137 903 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 ADCY9O60503 1353 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 KCNQ3O43525 872 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 C1orf141Q5JVX7 400 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 RGS22Q8NE09 1264 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 TTC41PQ6P2S7 1318 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 LMTK3Q96Q04 1460 aa24.57■■□□□ 1.52
SPNS1-203ENST00000334536 HEG1Q9ULI3 1381 aa24.56■■□□□ 1.52
SPNS1-203ENST00000334536 SGSM2O43147 1006 aa24.56■■□□□ 1.52
SPNS1-203ENST00000334536 KIAA1524Q8TCG1 905 aa24.55■■□□□ 1.52
SPNS1-203ENST00000334536 ZFP91Q96JP5 570 aaPredicted RBP24.55■■□□□ 1.52
SPNS1-203ENST00000334536 RGPD2P0DJD1 1756 aa24.54■■□□□ 1.52
SPNS1-203ENST00000334536 RAD50Q92878 1312 aa24.54■■□□□ 1.52
SPNS1-203ENST00000334536 GCP02774 474 aa24.54■■□□□ 1.52
SPNS1-203ENST00000334536 LRRC59Q96AG4 307 aaKnown RBP24.54■■□□□ 1.52
SPNS1-203ENST00000334536 MPRIPQ6WCQ1 1025 aa24.54■■□□□ 1.52
SPNS1-203ENST00000334536 RNF214Q8ND24 703 aa24.54■■□□□ 1.52
SPNS1-203ENST00000334536 EFCC1Q9HA90 598 aa24.54■■□□□ 1.52
SPNS1-203ENST00000334536 IGSF3O75054 1194 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms