RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 ZNF831Q5JPB2 1677 aa13.07□□□□□ -0.32
AP1S3-201ENST00000334271 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
AP1S3-201ENST00000334271 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
AP1S3-201ENST00000334271 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
AP1S3-201ENST00000334271 DDX58O95786 925 aaKnown RBP13.07□□□□□ -0.32
AP1S3-201ENST00000334271 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
AP1S3-201ENST00000334271 RPAP2Q8IXW5 612 aaPredicted RBP13.06□□□□□ -0.32
AP1S3-201ENST00000334271 BCL9O00512 1426 aa13.06□□□□□ -0.32
AP1S3-201ENST00000334271 GLI3P10071 1580 aa13.06□□□□□ -0.32
AP1S3-201ENST00000334271 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
AP1S3-201ENST00000334271 C5P01031 1676 aa13.06□□□□□ -0.32
AP1S3-201ENST00000334271 ITGB4P16144 1822 aa13.06□□□□□ -0.32
AP1S3-201ENST00000334271 CLGNO14967 610 aa13.05□□□□□ -0.32
AP1S3-201ENST00000334271 GNAI3P08754 354 aa13.05□□□□□ -0.32
AP1S3-201ENST00000334271 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
AP1S3-201ENST00000334271 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
AP1S3-201ENST00000334271 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
AP1S3-201ENST00000334271 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
AP1S3-201ENST00000334271 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
AP1S3-201ENST00000334271 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
AP1S3-201ENST00000334271 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
AP1S3-201ENST00000334271 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
AP1S3-201ENST00000334271 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
AP1S3-201ENST00000334271 FOXD4L6Q3SYB3 417 aaPredicted RBP13.03□□□□□ -0.32
AP1S3-201ENST00000334271 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
AP1S3-201ENST00000334271 FOXD4L3Q6VB84 417 aaPredicted RBP13.03□□□□□ -0.32
AP1S3-201ENST00000334271 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
AP1S3-201ENST00000334271 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
AP1S3-201ENST00000334271 DDB1Q16531 1140 aa13.03□□□□□ -0.32
AP1S3-201ENST00000334271 PCDHB15Q9Y5E8 787 aa13.03□□□□□ -0.32
AP1S3-201ENST00000334271 TNNQ9UQP3 1299 aa13.02□□□□□ -0.33
AP1S3-201ENST00000334271 HMMRO75330 724 aa13.01□□□□□ -0.33
AP1S3-201ENST00000334271 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
AP1S3-201ENST00000334271 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
AP1S3-201ENST00000334271 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
AP1S3-201ENST00000334271 KCNQ3O43525 872 aa13.01□□□□□ -0.33
AP1S3-201ENST00000334271 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
AP1S3-201ENST00000334271 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
AP1S3-201ENST00000334271 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
AP1S3-201ENST00000334271 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
AP1S3-201ENST00000334271 DOT1LQ8TEK3 1739 aa13□□□□□ -0.33
AP1S3-201ENST00000334271 ANKRD44Q8N8A2 993 aa13□□□□□ -0.33
AP1S3-201ENST00000334271 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
AP1S3-201ENST00000334271 COL15A1P39059 1388 aa13□□□□□ -0.33
AP1S3-201ENST00000334271 NUTM2BA6NNL0 878 aaPredicted RBP13□□□□□ -0.33
AP1S3-201ENST00000334271 NUTM2EB1AL46 878 aaPredicted RBP13□□□□□ -0.33
AP1S3-201ENST00000334271 G2E3Q7L622 706 aa13□□□□□ -0.33
AP1S3-201ENST00000334271 NUTM2AQ8IVF1 878 aaPredicted RBP13□□□□□ -0.33
AP1S3-201ENST00000334271 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
AP1S3-201ENST00000334271 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
AP1S3-201ENST00000334271 ATRNO75882 1429 aa12.99□□□□□ -0.33
AP1S3-201ENST00000334271 IGHDP01880 384 aa12.98□□□□□ -0.33
AP1S3-201ENST00000334271 GNAI2P04899 355 aa12.98□□□□□ -0.33
AP1S3-201ENST00000334271 SMARCC1Q92922 1105 aaPredicted RBP12.98□□□□□ -0.33
AP1S3-201ENST00000334271 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
AP1S3-201ENST00000334271 PDIA6Q15084 440 aa12.98□□□□□ -0.33
AP1S3-201ENST00000334271 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
AP1S3-201ENST00000334271 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
AP1S3-201ENST00000334271 UTYO14607 1347 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
AP1S3-201ENST00000334271 RREB1Q92766 1687 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 ADCY9O60503 1353 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 RGL2O15211 777 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 STARD3NLO95772 234 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 SLC39A6Q13433 755 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 USP21Q9UK80 565 aa12.97□□□□□ -0.33
AP1S3-201ENST00000334271 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
AP1S3-201ENST00000334271 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.33
AP1S3-201ENST00000334271 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
AP1S3-201ENST00000334271 HSPA1LP34931 641 aa12.96□□□□□ -0.34
AP1S3-201ENST00000334271 PIGBQ92521 554 aa12.96□□□□□ -0.34
AP1S3-201ENST00000334271 C8orf37Q96NL8 207 aa12.96□□□□□ -0.34
AP1S3-201ENST00000334271 DCTPP1Q9H773 170 aa12.96□□□□□ -0.34
AP1S3-201ENST00000334271 NUCB1Q02818 461 aa12.95□□□□□ -0.34
AP1S3-201ENST00000334271 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
AP1S3-201ENST00000334271 PHAXQ9H814 394 aaKnown RBP12.95□□□□□ -0.34
AP1S3-201ENST00000334271 NHSQ6T4R5 1651 aa12.95□□□□□ -0.34
AP1S3-201ENST00000334271 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
AP1S3-201ENST00000334271 NUP188Q5SRE5 1749 aa12.95□□□□□ -0.34
AP1S3-201ENST00000334271 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
AP1S3-201ENST00000334271 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 UBTFL1P0CB47 393 aaPredicted RBP12.94□□□□□ -0.34
AP1S3-201ENST00000334271 MTX1Q13505 466 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 SLC4A10Q6U841 1118 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 METTL22Q9BUU2 404 aaPredicted RBP12.94□□□□□ -0.34
AP1S3-201ENST00000334271 TJP1Q07157 1748 aa12.94□□□□□ -0.34
AP1S3-201ENST00000334271 ATP8B2P98198 1209 aa12.93□□□□□ -0.34
AP1S3-201ENST00000334271 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
AP1S3-201ENST00000334271 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
AP1S3-201ENST00000334271 USP44Q9H0E7 712 aa12.93□□□□□ -0.34
AP1S3-201ENST00000334271 USP16Q9Y5T5 823 aa12.93□□□□□ -0.34
AP1S3-201ENST00000334271 MMP14P50281 582 aa12.93□□□□□ -0.34
AP1S3-201ENST00000334271 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
AP1S3-201ENST00000334271 MEIS3Q99687 375 aa12.93□□□□□ -0.34
AP1S3-201ENST00000334271 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms