RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
SYN3-201ENST00000332840 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
SYN3-201ENST00000332840 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
SYN3-201ENST00000332840 PCNTO95613 3336 aa12.6□□□□□ -0.39
SYN3-201ENST00000332840 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
SYN3-201ENST00000332840 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
SYN3-201ENST00000332840 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
SYN3-201ENST00000332840 MIS18AQ9NYP9 233 aa12.6□□□□□ -0.39
SYN3-201ENST00000332840 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
SYN3-201ENST00000332840 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
SYN3-201ENST00000332840 KIF3CO14782 793 aa12.59□□□□□ -0.39
SYN3-201ENST00000332840 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
SYN3-201ENST00000332840 DDR1Q08345 913 aa12.59□□□□□ -0.39
SYN3-201ENST00000332840 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
SYN3-201ENST00000332840 NFIXQ14938 502 aa12.59□□□□□ -0.39
SYN3-201ENST00000332840 CLEC4GQ6UXB4 293 aa12.59□□□□□ -0.39
SYN3-201ENST00000332840 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
SYN3-201ENST00000332840 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
SYN3-201ENST00000332840 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
SYN3-201ENST00000332840 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
SYN3-201ENST00000332840 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
SYN3-201ENST00000332840 PXDNLA1KZ92 1463 aa12.58□□□□□ -0.4
SYN3-201ENST00000332840 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 CHL1O00533 1208 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 CAMTA2O94983 1202 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 SERPINB2P05120 415 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 HTRA3P83110 453 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 CCDC27Q2M243 656 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
SYN3-201ENST00000332840 NPHP1O15259 732 aa12.56□□□□□ -0.4
SYN3-201ENST00000332840 HOXB7P09629 217 aa12.56□□□□□ -0.4
SYN3-201ENST00000332840 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
SYN3-201ENST00000332840 CHMP4AQ9BY43 222 aa12.56□□□□□ -0.4
SYN3-201ENST00000332840 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 DPEP1P16444 411 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 GNAI1P63096 354 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 SLFN5Q08AF3 891 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 TBC1D9BQ66K14 1250 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
SYN3-201ENST00000332840 KIF6Q6ZMV9 814 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 NBPF15Q8N660 670 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 NMRK2Q9NPI5 230 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 IFT57Q9NWB7 429 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
SYN3-201ENST00000332840 A0A0G2JLW4 131 aa12.54□□□□□ -0.4
SYN3-201ENST00000332840 E9PSI1 815 aa12.54□□□□□ -0.4
SYN3-201ENST00000332840 ST5P78524 1137 aa12.54□□□□□ -0.4
SYN3-201ENST00000332840 BICDL1Q6ZP65 573 aa12.54□□□□□ -0.4
SYN3-201ENST00000332840 CNBD1Q8NA66 436 aa12.54□□□□□ -0.4
SYN3-201ENST00000332840 LAS1LQ9Y4W2 734 aaKnown RBP12.54□□□□□ -0.4
SYN3-201ENST00000332840 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
SYN3-201ENST00000332840 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
SYN3-201ENST00000332840 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
SYN3-201ENST00000332840 PDE6BP35913 854 aa12.53□□□□□ -0.4
SYN3-201ENST00000332840 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
SYN3-201ENST00000332840 DALRD3Q5D0E6 543 aaKnown RBP12.53□□□□□ -0.4
SYN3-201ENST00000332840 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
SYN3-201ENST00000332840 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
SYN3-201ENST00000332840 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
SYN3-201ENST00000332840 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
SYN3-201ENST00000332840 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
SYN3-201ENST00000332840 H0YIN7 160 aa12.52□□□□□ -0.41
SYN3-201ENST00000332840 APLP1P51693 650 aa12.52□□□□□ -0.41
SYN3-201ENST00000332840 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.41
SYN3-201ENST00000332840 NBPF5PQ86XG9 351 aaPredicted RBP12.52□□□□□ -0.41
SYN3-201ENST00000332840 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
SYN3-201ENST00000332840 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.41
SYN3-201ENST00000332840 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.41
SYN3-201ENST00000332840 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
SYN3-201ENST00000332840 MYL6BP14649 208 aa12.51□□□□□ -0.41
SYN3-201ENST00000332840 EIF2S2P20042 333 aaKnown RBP12.51□□□□□ -0.41
SYN3-201ENST00000332840 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
SYN3-201ENST00000332840 PRR5LQ6MZQ0 368 aa12.51□□□□□ -0.41
SYN3-201ENST00000332840 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
SYN3-201ENST00000332840 RNF123Q5XPI4 1314 aa12.51□□□□□ -0.41
SYN3-201ENST00000332840 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
SYN3-201ENST00000332840 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
SYN3-201ENST00000332840 KCNA3P22001 575 aa12.5□□□□□ -0.41
SYN3-201ENST00000332840 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
SYN3-201ENST00000332840 NYXQ9GZU5 481 aa12.5□□□□□ -0.41
SYN3-201ENST00000332840 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
SYN3-201ENST00000332840 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
SYN3-201ENST00000332840 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
SYN3-201ENST00000332840 IBTKQ9P2D0 1353 aaPredicted RBP12.5□□□□□ -0.41
SYN3-201ENST00000332840 IL16Q14005 1332 aa12.49□□□□□ -0.41
SYN3-201ENST00000332840 TOMM70O94826 608 aa12.49□□□□□ -0.41
SYN3-201ENST00000332840 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
SYN3-201ENST00000332840 CHRNA5P30532 468 aa12.49□□□□□ -0.41
SYN3-201ENST00000332840 HSP90AB3PQ58FF7 597 aa12.49□□□□□ -0.41
SYN3-201ENST00000332840 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
SYN3-201ENST00000332840 C2CD5Q86YS7 1000 aa12.49□□□□□ -0.41
SYN3-201ENST00000332840 TTLL6Q8N841 843 aa12.49□□□□□ -0.41
SYN3-201ENST00000332840 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms